RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 FAM109BQ6ICB4 259 aaPredicted RBP12.63□□□□□ -0.39
TRAV4-201ENST00000390426 NSMFQ6X4W1 530 aa12.63□□□□□ -0.39
TRAV4-201ENST00000390426 ANKRD33Q7Z3H0 272 aa12.63□□□□□ -0.39
TRAV4-201ENST00000390426 SMC5Q8IY18 1101 aa12.63□□□□□ -0.39
TRAV4-201ENST00000390426 PCSK9Q8NBP7 692 aaKnown RBP12.63□□□□□ -0.39
TRAV4-201ENST00000390426 GLT1D1Q96MS3 346 aa12.63□□□□□ -0.39
TRAV4-201ENST00000390426 PURBQ96QR8 312 aaKnown RBP12.63□□□□□ -0.39
TRAV4-201ENST00000390426 TMEM47Q9BQJ4 181 aa12.63□□□□□ -0.39
TRAV4-201ENST00000390426 CYP39A1Q9NYL5 469 aa12.63□□□□□ -0.39
TRAV4-201ENST00000390426 ELP1O95163 1332 aa12.62□□□□□ -0.39
TRAV4-201ENST00000390426 CCDC171Q6TFL3 1326 aa12.62□□□□□ -0.39
TRAV4-201ENST00000390426 ASB14A6NK59 587 aa12.62□□□□□ -0.39
TRAV4-201ENST00000390426 SDSP20132 328 aa12.62□□□□□ -0.39
TRAV4-201ENST00000390426 PTGS1P23219 599 aa12.62□□□□□ -0.39
TRAV4-201ENST00000390426 ZNF697Q5TEC3 545 aa12.62□□□□□ -0.39
TRAV4-201ENST00000390426 EEPD1Q7L9B9 569 aa12.62□□□□□ -0.39
TRAV4-201ENST00000390426 CHD1LQ86WJ1 897 aa12.62□□□□□ -0.39
TRAV4-201ENST00000390426 TICAM2Q86XR7 235 aa12.62□□□□□ -0.39
TRAV4-201ENST00000390426 PLEKHM2Q8IWE5 1019 aa12.62□□□□□ -0.39
TRAV4-201ENST00000390426 EXOC6Q8TAG9 804 aa12.62□□□□□ -0.39
TRAV4-201ENST00000390426 TOX2Q96NM4 488 aa12.62□□□□□ -0.39
TRAV4-201ENST00000390426 RANBP17Q9H2T7 1088 aaKnown RBP12.62□□□□□ -0.39
TRAV4-201ENST00000390426 PDGFCQ9NRA1 345 aa12.62□□□□□ -0.39
TRAV4-201ENST00000390426 TCP11L1Q9NUJ3 509 aa12.62□□□□□ -0.39
TRAV4-201ENST00000390426 ASTN1O14525 1302 aa12.62□□□□□ -0.39
TRAV4-201ENST00000390426 A0A0U1RQG5 324 aaPredicted RBP12.61□□□□□ -0.39
TRAV4-201ENST00000390426 ARVCFO00192 962 aa12.61□□□□□ -0.39
TRAV4-201ENST00000390426 CTAGE5O15320 804 aa12.61□□□□□ -0.39
TRAV4-201ENST00000390426 DYNC1LI2O43237 492 aaPredicted RBP12.61□□□□□ -0.39
TRAV4-201ENST00000390426 ICAM1P05362 532 aa12.61□□□□□ -0.39
TRAV4-201ENST00000390426 CDK7P50613 346 aa12.61□□□□□ -0.39
TRAV4-201ENST00000390426 FPGSQ05932 587 aa12.61□□□□□ -0.39
TRAV4-201ENST00000390426 AAMPQ13685 434 aa12.61□□□□□ -0.39
TRAV4-201ENST00000390426 BAATQ14032 418 aaPredicted RBP12.61□□□□□ -0.39
TRAV4-201ENST00000390426 AKNAD1Q5T1N1 836 aa12.61□□□□□ -0.39
TRAV4-201ENST00000390426 BTNL9Q6UXG8 535 aa12.61□□□□□ -0.39
TRAV4-201ENST00000390426 MFSD6Q6ZSS7 791 aa12.61□□□□□ -0.39
TRAV4-201ENST00000390426 TBC1D10CQ8IV04 446 aa12.61□□□□□ -0.39
TRAV4-201ENST00000390426 RNPC3Q96LT9 517 aaKnown RBP12.61□□□□□ -0.39
TRAV4-201ENST00000390426 GUCD1Q96NT3 240 aa12.61□□□□□ -0.39
TRAV4-201ENST00000390426 MCM3APO60318 1980 aa12.61□□□□□ -0.39
TRAV4-201ENST00000390426 ZMYM6O95789 1325 aa12.61□□□□□ -0.39
TRAV4-201ENST00000390426 DLL1O00548 723 aa12.6□□□□□ -0.39
TRAV4-201ENST00000390426 TIMP1P01033 207 aa12.6□□□□□ -0.39
TRAV4-201ENST00000390426 PDHBP11177 359 aa12.6□□□□□ -0.39
TRAV4-201ENST00000390426 SMPD1P17405 629 aa12.6□□□□□ -0.39
TRAV4-201ENST00000390426 MFAP1P55081 439 aaKnown RBP12.6□□□□□ -0.39
TRAV4-201ENST00000390426 SMAD3P84022 425 aaKnown RBP12.6□□□□□ -0.39
TRAV4-201ENST00000390426 NUCB1Q02818 461 aa12.6□□□□□ -0.39
TRAV4-201ENST00000390426 TMEM63BQ5T3F8 832 aa12.6□□□□□ -0.39
TRAV4-201ENST00000390426 TAPT1Q6NXT6 567 aa12.6□□□□□ -0.39
TRAV4-201ENST00000390426 CXCL17Q6UXB2 119 aa12.6□□□□□ -0.39
TRAV4-201ENST00000390426 TLK2Q86UE8 772 aa12.6□□□□□ -0.39
TRAV4-201ENST00000390426 FBXO16Q8IX29 292 aaPredicted RBP12.6□□□□□ -0.39
TRAV4-201ENST00000390426 ZKSCAN3Q9BRR0 538 aa12.6□□□□□ -0.39
TRAV4-201ENST00000390426 AP5M1Q9H0R1 490 aa12.6□□□□□ -0.39
TRAV4-201ENST00000390426 SEMA6BQ9H3T3 888 aa12.6□□□□□ -0.39
TRAV4-201ENST00000390426 GNEQ9Y223 722 aaKnown RBP12.6□□□□□ -0.39
TRAV4-201ENST00000390426 LAMA3Q16787 3333 aa12.6□□□□□ -0.39
TRAV4-201ENST00000390426 PTPDC1A2A3K4 754 aa12.59□□□□□ -0.39
TRAV4-201ENST00000390426 NFIBO00712 420 aa12.59□□□□□ -0.39
TRAV4-201ENST00000390426 NKX3-2P78367 333 aa12.59□□□□□ -0.39
TRAV4-201ENST00000390426 ZNF543Q08ER8 600 aa12.59□□□□□ -0.39
TRAV4-201ENST00000390426 IQSEC1Q6DN90 963 aa12.59□□□□□ -0.39
TRAV4-201ENST00000390426 CWC27Q6UX04 472 aaKnown RBP12.59□□□□□ -0.39
TRAV4-201ENST00000390426 KIAA1211Q6ZU35 1233 aa12.59□□□□□ -0.39
TRAV4-201ENST00000390426 TTC14Q96N46 770 aa12.59□□□□□ -0.39
TRAV4-201ENST00000390426 PPP1R12CQ9BZL4 782 aa12.59□□□□□ -0.39
TRAV4-201ENST00000390426 OSBPL3Q9H4L5 887 aa12.59□□□□□ -0.39
TRAV4-201ENST00000390426 RNF41Q9H4P4 317 aaPredicted RBP12.59□□□□□ -0.39
TRAV4-201ENST00000390426 DIAPH3Q9NSV4 1193 aa12.59□□□□□ -0.39
TRAV4-201ENST00000390426 TBX21Q9UL17 535 aa12.59□□□□□ -0.39
TRAV4-201ENST00000390426 NEDD4P46934 1319 aa12.59□□□□□ -0.39
TRAV4-201ENST00000390426 MROH7Q68CQ1 1323 aa12.59□□□□□ -0.39
TRAV4-201ENST00000390426 ZNF213O14771 459 aa12.58□□□□□ -0.4
TRAV4-201ENST00000390426 TLR3O15455 904 aaKnown RBP12.58□□□□□ -0.4
TRAV4-201ENST00000390426 GOLGA8HP0CJ92 632 aa12.58□□□□□ -0.4
TRAV4-201ENST00000390426 CALML3P27482 149 aa12.58□□□□□ -0.4
TRAV4-201ENST00000390426 ALDH5A1P51649 535 aaPredicted RBP12.58□□□□□ -0.4
TRAV4-201ENST00000390426 FSCN1Q16658 493 aaKnown RBP12.58□□□□□ -0.4
TRAV4-201ENST00000390426 MFSD5Q6N075 450 aa12.58□□□□□ -0.4
TRAV4-201ENST00000390426 FAM126BQ8IXS8 530 aa12.58□□□□□ -0.4
TRAV4-201ENST00000390426 MORC4Q8TE76 937 aa12.58□□□□□ -0.4
TRAV4-201ENST00000390426 ESR2Q92731 530 aa12.58□□□□□ -0.4
TRAV4-201ENST00000390426 CDX2Q99626 313 aaPredicted RBP12.58□□□□□ -0.4
TRAV4-201ENST00000390426 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRAV4-201ENST00000390426 TTYH1Q9H313 450 aaPredicted RBP12.58□□□□□ -0.4
TRAV4-201ENST00000390426 VTA1Q9NP79 307 aa12.58□□□□□ -0.4
TRAV4-201ENST00000390426 ZEB2O60315 1214 aa12.57□□□□□ -0.4
TRAV4-201ENST00000390426 SNHG28P0DPA3 235 aa12.57□□□□□ -0.4
TRAV4-201ENST00000390426 PCP11498 1178 aaKnown RBP12.57□□□□□ -0.4
TRAV4-201ENST00000390426 CSF2RAP15509 400 aa12.57□□□□□ -0.4
TRAV4-201ENST00000390426 PPIGQ13427 754 aaKnown RBP eCLIP12.57□□□□□ -0.4
TRAV4-201ENST00000390426 ITGA7Q13683 1181 aa12.57□□□□□ -0.4
TRAV4-201ENST00000390426 SLC30A10Q6XR72 485 aa12.57□□□□□ -0.4
TRAV4-201ENST00000390426 CLEC4DQ8WXI8 215 aa12.57□□□□□ -0.4
TRAV4-201ENST00000390426 UBA5Q9GZZ9 404 aa12.57□□□□□ -0.4
TRAV4-201ENST00000390426 CPVLQ9H3G5 476 aa12.57□□□□□ -0.4
TRAV4-201ENST00000390426 ADD3Q9UEY8 706 aaKnown RBP12.57□□□□□ -0.4
TRAV4-201ENST00000390426 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms