RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 CDC45O75419 566 aa8.73□□□□□ -1.01
TRBV28-201ENST00000390400 GLRX3O76003 335 aaKnown RBP8.73□□□□□ -1.01
TRBV28-201ENST00000390400 USP17L7P0C7H9 530 aa8.73□□□□□ -1.01
TRBV28-201ENST00000390400 ATP5JP18859 108 aa8.73□□□□□ -1.01
TRBV28-201ENST00000390400 IARSP41252 1262 aaKnown RBP8.73□□□□□ -1.01
TRBV28-201ENST00000390400 RASSF7Q02833 373 aa8.73□□□□□ -1.01
TRBV28-201ENST00000390400 GALNT12Q8IXK2 581 aa8.73□□□□□ -1.01
TRBV28-201ENST00000390400 NIM1KQ8IY84 436 aa8.73□□□□□ -1.01
TRBV28-201ENST00000390400 GLIS3Q8NEA6 775 aa8.73□□□□□ -1.01
TRBV28-201ENST00000390400 TTC16Q8NEE8 873 aa8.73□□□□□ -1.01
TRBV28-201ENST00000390400 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.73□□□□□ -1.01
TRBV28-201ENST00000390400 ANKRD7Q92527 254 aa8.73□□□□□ -1.01
TRBV28-201ENST00000390400 IL17RAQ96F46 866 aa8.73□□□□□ -1.01
TRBV28-201ENST00000390400 INTS4Q96HW7 963 aaKnown RBP8.73□□□□□ -1.01
TRBV28-201ENST00000390400 ZNF512BQ96KM6 892 aaPredicted RBP8.73□□□□□ -1.01
TRBV28-201ENST00000390400 CD209Q9NNX6 404 aa8.73□□□□□ -1.01
TRBV28-201ENST00000390400 DNMT3LQ9UJW3 386 aa8.73□□□□□ -1.01
TRBV28-201ENST00000390400 AKAP11Q9UKA4 1901 aa8.73□□□□□ -1.01
TRBV28-201ENST00000390400 SBF1O95248 1867 aa8.72□□□□□ -1.01
TRBV28-201ENST00000390400 GOLGA6L6A8MZA4 724 aa8.72□□□□□ -1.01
TRBV28-201ENST00000390400 CTIFO43310 598 aaKnown RBP8.72□□□□□ -1.01
TRBV28-201ENST00000390400 ECE2O60344 883 aa8.72□□□□□ -1.01
TRBV28-201ENST00000390400 IL1R1P14778 569 aa8.72□□□□□ -1.01
TRBV28-201ENST00000390400 SFSWAPQ12872 951 aaKnown RBP8.72□□□□□ -1.01
TRBV28-201ENST00000390400 RASGRF1Q13972 1273 aa8.72□□□□□ -1.01
TRBV28-201ENST00000390400 GRM2Q14416 872 aa8.72□□□□□ -1.01
TRBV28-201ENST00000390400 CASC1Q6TDU7 716 aa8.72□□□□□ -1.01
TRBV28-201ENST00000390400 SLC43A3Q8NBI5 491 aa8.72□□□□□ -1.01
TRBV28-201ENST00000390400 TDRD7Q8NHU6 1098 aaKnown RBP8.72□□□□□ -1.01
TRBV28-201ENST00000390400 PI4K2BQ8TCG2 481 aa8.72□□□□□ -1.01
TRBV28-201ENST00000390400 JDP2Q8WYK2 163 aa8.72□□□□□ -1.01
TRBV28-201ENST00000390400 DHX38Q92620 1227 aaKnown RBP8.72□□□□□ -1.01
TRBV28-201ENST00000390400 DNAJC2Q99543 621 aaKnown RBP8.72□□□□□ -1.01
TRBV28-201ENST00000390400 KIF2CQ99661 725 aa8.72□□□□□ -1.01
TRBV28-201ENST00000390400 HAUS7Q99871 368 aa8.72□□□□□ -1.01
TRBV28-201ENST00000390400 BCO2Q9BYV7 579 aa8.72□□□□□ -1.01
TRBV28-201ENST00000390400 CRISPLD1Q9H336 500 aa8.72□□□□□ -1.01
TRBV28-201ENST00000390400 BOLA2Q9H3K6 86 aa8.72□□□□□ -1.01
TRBV28-201ENST00000390400 CCSER2Q9H7U1 834 aa8.72□□□□□ -1.01
TRBV28-201ENST00000390400 DBNDD1Q9H9R9 158 aa8.72□□□□□ -1.01
TRBV28-201ENST00000390400 DENND2AQ9ULE3 1009 aa8.72□□□□□ -1.01
TRBV28-201ENST00000390400 PDS5AQ29RF7 1337 aaKnown RBP8.72□□□□□ -1.01
TRBV28-201ENST00000390400 AK9Q5TCS8 1911 aa8.72□□□□□ -1.01
TRBV28-201ENST00000390400 DICER1Q9UPY3 1922 aaKnown RBP8.72□□□□□ -1.01
TRBV28-201ENST00000390400 UPP2O95045 317 aa8.71□□□□□ -1.02
TRBV28-201ENST00000390400 EGFRP00533 1210 aa8.71□□□□□ -1.02
TRBV28-201ENST00000390400 LMNB1P20700 586 aa8.71□□□□□ -1.02
TRBV28-201ENST00000390400 MCAMP43121 646 aa8.71□□□□□ -1.02
TRBV28-201ENST00000390400 VEGFBP49765 207 aa8.71□□□□□ -1.02
TRBV28-201ENST00000390400 MAP3K10Q02779 954 aa8.71□□□□□ -1.02
TRBV28-201ENST00000390400 UBAP2LQ14157 1087 aaKnown RBP8.71□□□□□ -1.02
TRBV28-201ENST00000390400 SCARF1Q14162 830 aa8.71□□□□□ -1.02
TRBV28-201ENST00000390400 TTC22Q5TAA0 569 aa8.71□□□□□ -1.02
TRBV28-201ENST00000390400 PEAR1Q5VY43 1037 aaPredicted RBP8.71□□□□□ -1.02
TRBV28-201ENST00000390400 PODNQ7Z5L7 613 aa8.71□□□□□ -1.02
TRBV28-201ENST00000390400 SPATA5Q8NB90 893 aa8.71□□□□□ -1.02
TRBV28-201ENST00000390400 UBXN4Q92575 508 aa8.71□□□□□ -1.02
TRBV28-201ENST00000390400 HMG20BQ9P0W2 317 aa8.71□□□□□ -1.02
TRBV28-201ENST00000390400 ZNRF3Q9ULT6 936 aa8.71□□□□□ -1.02
TRBV28-201ENST00000390400 FNDC3AQ9Y2H6 1198 aaKnown RBP8.71□□□□□ -1.02
TRBV28-201ENST00000390400 SCN9AQ15858 1988 aa8.71□□□□□ -1.02
TRBV28-201ENST00000390400 COL1A1P02452 1464 aaPredicted RBP8.7□□□□□ -1.02
TRBV28-201ENST00000390400 COL4A5P29400 1685 aa8.7□□□□□ -1.02
TRBV28-201ENST00000390400 SASH3O75995 380 aa8.7□□□□□ -1.02
TRBV28-201ENST00000390400 AVPP01185 164 aa8.7□□□□□ -1.02
TRBV28-201ENST00000390400 FAM177A1Q8N128 213 aaPredicted RBP8.7□□□□□ -1.02
TRBV28-201ENST00000390400 WDR66Q8TBY9 1149 aa8.7□□□□□ -1.02
TRBV28-201ENST00000390400 ZFP42Q96MM3 310 aa8.7□□□□□ -1.02
TRBV28-201ENST00000390400 TANGO6Q9C0B7 1094 aa8.7□□□□□ -1.02
TRBV28-201ENST00000390400 TSPY26PQ9H489 355 aa8.7□□□□□ -1.02
TRBV28-201ENST00000390400 NEUROD4Q9HD90 331 aa8.7□□□□□ -1.02
TRBV28-201ENST00000390400 BRD7Q9NPI1 651 aa8.7□□□□□ -1.02
TRBV28-201ENST00000390400 PAG1Q9NWQ8 432 aa8.7□□□□□ -1.02
TRBV28-201ENST00000390400 CALCOCO1Q9P1Z2 691 aa8.7□□□□□ -1.02
TRBV28-201ENST00000390400 CGNQ9P2M7 1197 aaKnown RBP8.7□□□□□ -1.02
TRBV28-201ENST00000390400 KANSL3Q9P2N6 904 aa8.7□□□□□ -1.02
TRBV28-201ENST00000390400 PRKAG2Q9UGJ0 569 aa8.7□□□□□ -1.02
TRBV28-201ENST00000390400 FAM205AQ6ZU69 1335 aa8.7□□□□□ -1.02
TRBV28-201ENST00000390400 PSME4Q14997 1843 aa8.7□□□□□ -1.02
TRBV28-201ENST00000390400 SOBPA7XYQ1 873 aa8.69□□□□□ -1.02
TRBV28-201ENST00000390400 YDJCA8MPS7 323 aa8.69□□□□□ -1.02
TRBV28-201ENST00000390400 GOLIM4O00461 696 aa8.69□□□□□ -1.02
TRBV28-201ENST00000390400 REC8O95072 547 aa8.69□□□□□ -1.02
TRBV28-201ENST00000390400 GSPT1P15170 499 aaKnown RBP8.69□□□□□ -1.02
TRBV28-201ENST00000390400 ACPPP15309 386 aa8.69□□□□□ -1.02
TRBV28-201ENST00000390400 TARSP26639 723 aaKnown RBP8.69□□□□□ -1.02
TRBV28-201ENST00000390400 PRELPP51888 382 aa8.69□□□□□ -1.02
TRBV28-201ENST00000390400 ANAPC15P60006 121 aa8.69□□□□□ -1.02
TRBV28-201ENST00000390400 DHX8Q14562 1220 aaKnown RBP8.69□□□□□ -1.02
TRBV28-201ENST00000390400 NOLC1Q14978 699 aaKnown RBP eCLIP8.69□□□□□ -1.02
TRBV28-201ENST00000390400 TTF1Q15361 905 aaPredicted RBP8.69□□□□□ -1.02
TRBV28-201ENST00000390400 COL13A1Q5TAT6 717 aaPredicted RBP8.69□□□□□ -1.02
TRBV28-201ENST00000390400 USP48Q86UV5 1035 aa8.69□□□□□ -1.02
TRBV28-201ENST00000390400 CNTROBQ8N137 903 aa8.69□□□□□ -1.02
TRBV28-201ENST00000390400 ZGPATQ8N5A5 531 aaKnown RBP8.69□□□□□ -1.02
TRBV28-201ENST00000390400 TBC1D22AQ8WUA7 517 aa8.69□□□□□ -1.02
TRBV28-201ENST00000390400 EVI5LQ96CN4 794 aa8.69□□□□□ -1.02
TRBV28-201ENST00000390400 RBSNQ9H1K0 784 aa8.69□□□□□ -1.02
TRBV28-201ENST00000390400 ABI2Q9NYB9 513 aaPredicted RBP8.69□□□□□ -1.02
TRBV28-201ENST00000390400 RNF181Q9P0P0 153 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms