RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 CSPP1Q1MSJ5 1256 aa11.56□□□□□ -0.56
IFT88-203ENST00000389373 FAM47CQ5HY64 1035 aa11.56□□□□□ -0.56
IFT88-203ENST00000389373 TMEM63BQ5T3F8 832 aa11.56□□□□□ -0.56
IFT88-203ENST00000389373 ZKSCAN2Q63HK3 967 aa11.56□□□□□ -0.56
IFT88-203ENST00000389373 CTR9Q6PD62 1173 aa11.56□□□□□ -0.56
IFT88-203ENST00000389373 SPRED2Q7Z698 418 aa11.56□□□□□ -0.56
IFT88-203ENST00000389373 ERC1Q8IUD2 1116 aa11.56□□□□□ -0.56
IFT88-203ENST00000389373 ITPRIPQ8IWB1 547 aa11.56□□□□□ -0.56
IFT88-203ENST00000389373 PPP1R13LQ8WUF5 828 aa11.56□□□□□ -0.56
IFT88-203ENST00000389373 SLC9A7Q96T83 725 aa11.56□□□□□ -0.56
IFT88-203ENST00000389373 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.56□□□□□ -0.56
IFT88-203ENST00000389373 SEZ6LQ9BYH1 1024 aa11.56□□□□□ -0.56
IFT88-203ENST00000389373 ALDH8A1Q9H2A2 487 aaPredicted RBP11.56□□□□□ -0.56
IFT88-203ENST00000389373 SLC38A10Q9HBR0 1119 aa11.56□□□□□ -0.56
IFT88-203ENST00000389373 COG6Q9Y2V7 657 aa11.56□□□□□ -0.56
IFT88-203ENST00000389373 CHGBP05060 677 aa11.55□□□□□ -0.56
IFT88-203ENST00000389373 MYL3P08590 195 aa11.55□□□□□ -0.56
IFT88-203ENST00000389373 IFIT2P09913 472 aaKnown RBP11.55□□□□□ -0.56
IFT88-203ENST00000389373 ADD2P35612 726 aa11.55□□□□□ -0.56
IFT88-203ENST00000389373 CACNB1Q02641 598 aaPredicted RBP11.55□□□□□ -0.56
IFT88-203ENST00000389373 IKQ13123 557 aaPredicted RBP11.55□□□□□ -0.56
IFT88-203ENST00000389373 IQSEC1Q6DN90 963 aa11.55□□□□□ -0.56
IFT88-203ENST00000389373 KIAA1211Q6ZU35 1233 aa11.55□□□□□ -0.56
IFT88-203ENST00000389373 HERC6Q8IVU3 1022 aa11.55□□□□□ -0.56
IFT88-203ENST00000389373 FBXO16Q8IX29 292 aaPredicted RBP11.55□□□□□ -0.56
IFT88-203ENST00000389373 RETREG2Q8NC44 543 aa11.55□□□□□ -0.56
IFT88-203ENST00000389373 BOLA2Q9H3K6 86 aa11.55□□□□□ -0.56
IFT88-203ENST00000389373 ACAD9Q9H845 621 aa11.55□□□□□ -0.56
IFT88-203ENST00000389373 PAG1Q9NWQ8 432 aa11.55□□□□□ -0.56
IFT88-203ENST00000389373 NYAP2Q9P242 653 aa11.55□□□□□ -0.56
IFT88-203ENST00000389373 FEM1BQ9UK73 627 aa11.55□□□□□ -0.56
IFT88-203ENST00000389373 TNKSO95271 1327 aa11.55□□□□□ -0.56
IFT88-203ENST00000389373 LRRC37A2A6NM11 1700 aa11.55□□□□□ -0.56
IFT88-203ENST00000389373 MINDY4BA8MYZ0 360 aa11.54□□□□□ -0.56
IFT88-203ENST00000389373 PRR33A8MZF0 331 aa11.54□□□□□ -0.56
IFT88-203ENST00000389373 ALAS1P13196 640 aa11.54□□□□□ -0.56
IFT88-203ENST00000389373 CHMP4BP1P59074 171 aa11.54□□□□□ -0.56
IFT88-203ENST00000389373 FTSJ3Q8IY81 847 aaKnown RBP11.54□□□□□ -0.56
IFT88-203ENST00000389373 GJD3Q8N144 294 aa11.54□□□□□ -0.56
IFT88-203ENST00000389373 CLASRPQ8N2M8 674 aaKnown RBP11.54□□□□□ -0.56
IFT88-203ENST00000389373 FAM133AQ8N9E0 248 aa11.54□□□□□ -0.56
IFT88-203ENST00000389373 PHOSPHO2Q8TCD6 241 aa11.54□□□□□ -0.56
IFT88-203ENST00000389373 RHPN1Q8TCX5 695 aa11.54□□□□□ -0.56
IFT88-203ENST00000389373 GDPD5Q8WTR4 605 aa11.54□□□□□ -0.56
IFT88-203ENST00000389373 ZBED2Q9BTP6 218 aa11.54□□□□□ -0.56
IFT88-203ENST00000389373 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.54□□□□□ -0.56
IFT88-203ENST00000389373 A1CFQ9NQ94 594 aaKnown RBP11.54□□□□□ -0.56
IFT88-203ENST00000389373 GPHNQ9NQX3 736 aaPredicted RBP11.54□□□□□ -0.56
IFT88-203ENST00000389373 RNF146Q9NTX7 359 aa11.54□□□□□ -0.56
IFT88-203ENST00000389373 MTUS1Q9ULD2 1270 aa11.54□□□□□ -0.56
IFT88-203ENST00000389373 MYH8P13535 1937 aa11.54□□□□□ -0.56
IFT88-203ENST00000389373 CHD9Q3L8U1 2897 aa11.53□□□□□ -0.56
IFT88-203ENST00000389373 TMEM232C9JQI7 657 aa11.53□□□□□ -0.56
IFT88-203ENST00000389373 RASA1P20936 1047 aa11.53□□□□□ -0.56
IFT88-203ENST00000389373 KCNJ6P48051 423 aa11.53□□□□□ -0.56
IFT88-203ENST00000389373 TAPT1Q6NXT6 567 aa11.53□□□□□ -0.56
IFT88-203ENST00000389373 CEP85Q6P2H3 762 aa11.53□□□□□ -0.56
IFT88-203ENST00000389373 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.53□□□□□ -0.56
IFT88-203ENST00000389373 TMCO2Q7Z6W1 182 aaPredicted RBP11.53□□□□□ -0.56
IFT88-203ENST00000389373 ZNF444Q8N0Y2 327 aaPredicted RBP11.53□□□□□ -0.56
IFT88-203ENST00000389373 LRRC47Q8N1G4 583 aaKnown RBP11.53□□□□□ -0.56
IFT88-203ENST00000389373 TRERF1Q96PN7 1200 aa11.53□□□□□ -0.56
IFT88-203ENST00000389373 UBE2ZQ9H832 354 aaPredicted RBP11.53□□□□□ -0.56
IFT88-203ENST00000389373 POLR3EQ9NVU0 708 aa11.53□□□□□ -0.56
IFT88-203ENST00000389373 PRRC2BQ5JSZ5 2229 aaKnown RBP11.53□□□□□ -0.56
IFT88-203ENST00000389373 MCM3APO60318 1980 aa11.52□□□□□ -0.56
IFT88-203ENST00000389373 LCHNA4D1U4 455 aa11.52□□□□□ -0.57
IFT88-203ENST00000389373 LPXNO60711 386 aa11.52□□□□□ -0.57
IFT88-203ENST00000389373 IQCF3P0C7M6 154 aa11.52□□□□□ -0.57
IFT88-203ENST00000389373 BMP3P12645 472 aa11.52□□□□□ -0.57
IFT88-203ENST00000389373 KCNA5P22460 613 aa11.52□□□□□ -0.57
IFT88-203ENST00000389373 RFC2P35250 354 aa11.52□□□□□ -0.57
IFT88-203ENST00000389373 OAZ1P54368 228 aa11.52□□□□□ -0.57
IFT88-203ENST00000389373 SNAP25P60880 206 aa11.52□□□□□ -0.57
IFT88-203ENST00000389373 HSP90AB4PQ58FF6 505 aa11.52□□□□□ -0.57
IFT88-203ENST00000389373 SLFN13Q68D06 897 aa11.52□□□□□ -0.57
IFT88-203ENST00000389373 NSMFQ6X4W1 530 aa11.52□□□□□ -0.57
IFT88-203ENST00000389373 FAM178BQ8IXR5 827 aa11.52□□□□□ -0.57
IFT88-203ENST00000389373 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.52□□□□□ -0.57
IFT88-203ENST00000389373 CRBNQ96SW2 442 aa11.52□□□□□ -0.57
IFT88-203ENST00000389373 ARPP21Q9UBL0 812 aaPredicted RBP11.52□□□□□ -0.57
IFT88-203ENST00000389373 NOD1Q9Y239 953 aa11.52□□□□□ -0.57
IFT88-203ENST00000389373 Q9Y3F1 56 aa11.52□□□□□ -0.57
IFT88-203ENST00000389373 BAZ2AQ9UIF9 1905 aaKnown RBP11.52□□□□□ -0.57
IFT88-203ENST00000389373 PRDM1O75626 825 aa11.51□□□□□ -0.57
IFT88-203ENST00000389373 ALADP13716 330 aa11.51□□□□□ -0.57
IFT88-203ENST00000389373 IL9P15248 144 aa11.51□□□□□ -0.57
IFT88-203ENST00000389373 NHLH1Q02575 133 aa11.51□□□□□ -0.57
IFT88-203ENST00000389373 NBPF20Q3BBV1 942 aa11.51□□□□□ -0.57
IFT88-203ENST00000389373 OR6J1Q8NGC5 347 aa11.51□□□□□ -0.57
IFT88-203ENST00000389373 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.51□□□□□ -0.57
IFT88-203ENST00000389373 FBXL18Q96ME1 805 aa11.51□□□□□ -0.57
IFT88-203ENST00000389373 PURBQ96QR8 312 aaKnown RBP11.51□□□□□ -0.57
IFT88-203ENST00000389373 PUS7LQ9H0K6 701 aaKnown RBP11.51□□□□□ -0.57
IFT88-203ENST00000389373 ZNF536O15090 1300 aa11.51□□□□□ -0.57
IFT88-203ENST00000389373 FDX1P10109 184 aa11.5□□□□□ -0.57
IFT88-203ENST00000389373 CPT1AP50416 773 aa11.5□□□□□ -0.57
IFT88-203ENST00000389373 PURAQ00577 322 aaKnown RBP11.5□□□□□ -0.57
IFT88-203ENST00000389373 BFSP2Q13515 415 aa11.5□□□□□ -0.57
IFT88-203ENST00000389373 TKFCQ3LXA3 575 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms