RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 POLA2Q14181 598 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 PPP2R5AQ15172 486 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 OR8K1Q8NGG5 319 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 SDR42E1Q8WUS8 393 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 PSDA5PKW4 1024 aaPredicted RBP13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 MMS19Q96T76 1030 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 CARD6Q9BX69 1037 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 LMBRD1Q9NUN5 540 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 CCDC170Q8IYT3 715 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 HGSO14964 777 aaPredicted RBP13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 RASSF4Q9H2L5 321 aa13.49□□□□□ -0.25
KCNQ3-201ENST00000388996 ADKP55263 362 aaKnown RBP13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 FBXO11Q86XK2 927 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 DCPSQ96C86 337 aaKnown RBP13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 LRRIQ4A6NIV6 560 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 NSFP46459 744 aaKnown RBP13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 VSIG1Q86XK7 387 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 TMEM232C9JQI7 657 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 ADCY8P40145 1251 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 PSMD6Q15008 389 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 KIAA0825Q8IV33 1275 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 SULF1Q8IWU6 871 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 RABGAP1Q9Y3P9 1069 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 CLTCL1P53675 1640 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 MAP3K4Q9Y6R4 1608 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 CAPN9O14815 690 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 ADORA1P30542 326 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 PHKG2P15735 406 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 MAN1A1P33908 653 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 SH2D4BQ5SQS7 431 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 TCP10L2B9ZVM9 353 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 THAP12O43422 761 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 LMNB1P20700 586 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 SATB1Q01826 763 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 USP44Q9H0E7 712 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 SLFN13Q68D06 897 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 SESTD1Q86VW0 696 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 RINT1Q6NUQ1 792 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 C10orf67Q8IYJ2 551 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 CUEDC2Q9H467 287 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 SERTAD1Q9UHV2 236 aa13.48□□□□□ -0.25
KCNQ3-201ENST00000388996 PLEKHG3A1L390 1219 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 HNRNPDLO14979 420 aaKnown RBP13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 ASPRV1Q53RT3 343 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 MYRIPQ8NFW9 859 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 POMGNT1Q8WZA1 660 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 PCDHA12Q9UN75 941 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 SEMA3EO15041 775 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 TMEM191BP0C7N4 346 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 CHRNDQ07001 517 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 TFDP1Q14186 410 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 GPR162Q16538 588 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 LRCH2Q5VUJ6 765 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 LAD1O00515 517 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 CMA1P23946 247 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 MYL7Q01449 175 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 ATP6V0A1Q93050 837 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 MAGI3Q5TCQ9 1506 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 KCNK3O14649 394 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 HESX1Q9UBX0 185 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 GLI2P10070 1586 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 FAM170AA1A519 330 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 TTLL7Q6ZT98 887 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 CMTR1Q8N1G2 835 aaKnown RBP13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 KIAA0100Q14667 2235 aaKnown RBP13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 ERVK-7P63135 1459 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 PFDN6O15212 129 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 FOSP01100 380 aaPredicted RBP13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 PLEKHG1Q9ULL1 1385 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 PPFIA4O75335 1185 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 RPS6KA2Q15349 733 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 FAM193BQ96PV7 902 aaPredicted RBP13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 PASKQ96RG2 1323 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 STX2P32856 288 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 CTNNA1P35221 906 aaKnown RBP13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 PTH1RQ03431 593 aa13.47□□□□□ -0.25
KCNQ3-201ENST00000388996 BCAP29Q9UHQ4 241 aa13.46□□□□□ -0.25
KCNQ3-201ENST00000388996 IPO11Q9UI26 975 aaKnown RBP13.46□□□□□ -0.25
KCNQ3-201ENST00000388996 SYMPKQ92797 1274 aaKnown RBP13.46□□□□□ -0.25
KCNQ3-201ENST00000388996 TEKT3Q9BXF9 490 aa13.46□□□□□ -0.25
KCNQ3-201ENST00000388996 MAP3K21Q5TCX8 1036 aa13.46□□□□□ -0.25
KCNQ3-201ENST00000388996 METTL14Q9HCE5 456 aaKnown RBP13.46□□□□□ -0.25
KCNQ3-201ENST00000388996 VCX3AQ9NNX9 186 aa13.46□□□□□ -0.25
KCNQ3-201ENST00000388996 BCS1LQ9Y276 419 aa13.46□□□□□ -0.25
KCNQ3-201ENST00000388996 M0R2C6 588 aa13.46□□□□□ -0.25
KCNQ3-201ENST00000388996 SCYL1Q96KG9 808 aa13.46□□□□□ -0.25
KCNQ3-201ENST00000388996 TTLL1O95922 423 aa13.46□□□□□ -0.25
KCNQ3-201ENST00000388996 GSTA1P08263 222 aa13.46□□□□□ -0.25
KCNQ3-201ENST00000388996 GSTA2P09210 222 aa13.46□□□□□ -0.25
KCNQ3-201ENST00000388996 ATF2P15336 505 aa13.46□□□□□ -0.25
KCNQ3-201ENST00000388996 ITKQ08881 620 aa13.46□□□□□ -0.25
KCNQ3-201ENST00000388996 CCDC13Q8IYE1 715 aa13.46□□□□□ -0.25
KCNQ3-201ENST00000388996 PALM2Q8IXS6 379 aa13.46□□□□□ -0.26
KCNQ3-201ENST00000388996 HYOU1Q9Y4L1 999 aa13.46□□□□□ -0.26
KCNQ3-201ENST00000388996 BZW2Q9Y6E2 419 aaKnown RBP13.46□□□□□ -0.26
KCNQ3-201ENST00000388996 TYW5A2RUC4 315 aaKnown RBP13.46□□□□□ -0.26
KCNQ3-201ENST00000388996 OAS2P29728 719 aaKnown RBP13.46□□□□□ -0.26
KCNQ3-201ENST00000388996 LONP1P36776 959 aaKnown RBP13.46□□□□□ -0.26
KCNQ3-201ENST00000388996 DPY19L2Q6NUT2 758 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms