RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 CHMP2AO43633 222 aa13.52□□□□□ -0.25
SRGAP3-202ENST00000383836 RPN1P04843 607 aaKnown RBP13.52□□□□□ -0.25
SRGAP3-202ENST00000383836 KCNJ14Q9UNX9 436 aa13.52□□□□□ -0.25
SRGAP3-202ENST00000383836 ARHGAP10A1A4S6 786 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 GNGT2O14610 69 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 NEK2P51955 445 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 SNX1Q13596 522 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 NELFCDQ8IXH7 590 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 PANX2Q96RD6 677 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 TMEM232C9JQI7 657 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 MAGOHBQ96A72 148 aaKnown RBP13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 SIRT1Q96EB6 747 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 MAP3K5Q99683 1374 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 CFAP73A6NFT4 308 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 CNPY4Q8N129 248 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 ZMYND12Q9H0C1 365 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 A0A1W2PQ27 194 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 A0A1W2PQ64 194 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 A0A1W2PQD8 194 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 BACH1O14867 736 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 POLR2FP61218 127 aaKnown RBP13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 KIFC3Q9BVG8 833 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 NOVA2Q9UNW9 492 aaKnown RBP13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 SOWAHDA6NJG2 315 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 E7EWF7 191 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 MMEP08473 750 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 PDE6CP51160 858 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 PSMD7P51665 324 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 CYTH2Q99418 400 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 STAM2O75886 525 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 HARSP12081 509 aaKnown RBP13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 ART3Q13508 389 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 NONOQ15233 471 aaKnown RBP eCLIP13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 PIK3R5Q8WYR1 880 aa13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 POLR3CQ9BUI4 534 aaPredicted RBP13.51□□□□□ -0.25
SRGAP3-202ENST00000383836 GYG2O15488 501 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 N4BP1O75113 896 aaKnown RBP13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 NSMCE1Q8WV22 266 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 SPC25Q9HBM1 224 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 GTPBP6O43824 516 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 CC2D1AQ6P1N0 951 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 TEX2Q8IWB9 1127 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 NEK9Q8TD19 979 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 ANKRD65E5RJM6 399 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 RASGRF2O14827 1237 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 CXCR5P32302 372 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 PLTPP55058 493 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 IL1RL1Q01638 556 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 C10orf76Q5T2E6 689 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 NAA35Q5VZE5 725 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 NCAPH2Q6IBW4 605 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 TTC6Q86TZ1 520 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 DSCC1Q9BVC3 393 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 OSBPL1AQ9BXW6 950 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 TMEM60Q9H2L4 133 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 ANTXR1Q9H6X2 564 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 BATF3Q9NR55 127 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 TPCN1Q9ULQ1 816 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 HSPA8P11142 646 aaKnown RBP13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 ZSWIM6Q9HCJ5 1215 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 GGCXP38435 758 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 ACTN3Q08043 901 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 ZNF711Q9Y462 761 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 TTLL3Q9Y4R7 772 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 H2AFZP0C0S5 128 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 H2AFVQ71UI9 128 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 CCDC117Q8IWD4 279 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 TRIM56Q9BRZ2 755 aaKnown RBP13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 ARMCX3Q9UH62 379 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 SLC7A5Q01650 507 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 HADHQ16836 314 aaKnown RBP13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 BEND6Q5SZJ8 279 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 C11orf57Q6ZUT1 292 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 MAML1Q92585 1016 aa13.5□□□□□ -0.25
SRGAP3-202ENST00000383836 NPC1L1Q9UHC9 1359 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 KDM1AO60341 852 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 LONP1P36776 959 aaKnown RBP13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 AP2B1P63010 937 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 BFSP1Q12934 665 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 DRP2Q13474 957 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 ZNF148Q9UQR1 794 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 KMT5BQ4FZB7 885 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 SRLQ86TD4 932 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 KBTBD3Q8NAB2 608 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 NBPF3Q9H094 633 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 PDCLQ13371 301 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 AKAP4Q5JQC9 854 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 TRIM15Q9C019 465 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 SLC4A7Q9Y6M7 1214 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 ADCY7P51828 1080 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 TUBGCP2Q9BSJ2 902 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 C14orf93Q9H972 538 aaKnown RBP13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 VPS54Q9P1Q0 977 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 PPIP5K1Q6PFW1 1433 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 PFKFB2O60825 505 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 YWHAEP62258 255 aaKnown RBP13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 MYO1EQ12965 1108 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 ZNF827Q17R98 1081 aa13.49□□□□□ -0.25
SRGAP3-202ENST00000383836 DPCR1Q3MIW9 517 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms