RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 DPP8Q6V1X1 898 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-203ENST00000381196 SYDE1Q6ZW31 735 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-203ENST00000381196 ZNF579Q8NAF0 562 aaKnown RBP5.35□□□□□ -1.55
PTPRD-203ENST00000381196 DCAF5Q96JK2 942 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 TTC25Q96NG3 672 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 VAT1LQ9HCJ6 419 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 USP54Q70EL1 1684 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 SMTNP53814 917 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 ARHGAP4P98171 946 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 PLCB3Q01970 1234 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 MAP3K2Q9Y2U5 619 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 IFIT3O14879 490 aaKnown RBP5.35□□□□□ -1.55
PTPRD-203ENST00000381196 STRN3Q13033 797 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 ITIH4Q14624 930 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 SEL1L2Q5TEA6 688 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 MFSD6Q6ZSS7 791 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 GSDMAQ96QA5 445 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 USP40Q9NVE5 1235 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 MID2Q9UJV3 735 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 STX8Q9UNK0 236 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 CSADQ9Y600 493 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 MYH10P35580 1976 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 IRX5P78411 483 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-203ENST00000381196 ASPHQ12797 758 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 PPP4R3CPQ6ZMV5 832 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 SYCP3Q8IZU3 236 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 ZNF274Q96GC6 653 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-203ENST00000381196 TMEM60Q9H2L4 133 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 ABT1Q9ULW3 272 aaKnown RBP5.34□□□□□ -1.55
PTPRD-203ENST00000381196 PNPLA6Q8IY17 1366 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 MYH8P13535 1937 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 MRPS9P82933 396 aaKnown RBP5.34□□□□□ -1.55
PTPRD-203ENST00000381196 XIAPP98170 497 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 MUM1Q2TAK8 710 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 ARHGEF18Q6ZSZ5 1173 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 TEKT1Q969V4 418 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 GGA1Q9UJY5 639 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 N4BP3O15049 544 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 CYP7A1P22680 504 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 UBE4AQ14139 1066 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 DAB2IPQ5VWQ8 1189 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 PLA2G4DQ86XP0 818 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 PPP1R14CQ8TAE6 165 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 DCPSQ96C86 337 aaKnown RBP5.34□□□□□ -1.55
PTPRD-203ENST00000381196 EFHD1Q9BUP0 239 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 H0YC42 278 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 HNRNPRO43390 633 aaKnown RBP5.34□□□□□ -1.55
PTPRD-203ENST00000381196 TPD52P55327 224 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-203ENST00000381196 BIRC2Q13490 618 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 PRKG1Q13976 671 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 CCDC80Q76M96 950 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 RBSNQ9H1K0 784 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 MYH2Q9UKX2 1941 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 SCN4AP35499 1836 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 AKR1B10O60218 316 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 CHGBP05060 677 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 CMA1P23946 247 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 CTNNA2P26232 953 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 RPL26P61254 145 aaKnown RBP5.34□□□□□ -1.55
PTPRD-203ENST00000381196 ATP2B3Q16720 1220 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 AGBL2Q5U5Z8 902 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 TCERG1LQ5VWI1 586 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 CENPUQ71F23 418 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 ZNF354CQ86Y25 554 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 PLEKHM2Q8IWE5 1019 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 AGGF1Q8N302 714 aaeCLIP5.34□□□□□ -1.55
PTPRD-203ENST00000381196 RIBC1Q8N443 379 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-203ENST00000381196 CXorf56Q9H5V9 222 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 M0QZ92 97 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 ATAD3BQ5T9A4 648 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 IWS1Q96ST2 819 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 SNRKQ9NRH2 765 aa5.34□□□□□ -1.55
PTPRD-203ENST00000381196 ADGRF5Q8IZF2 1346 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 CES2O00748 559 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 PPP6R2O75170 966 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 SNUPNO95149 360 aaKnown RBP5.34□□□□□ -1.56
PTPRD-203ENST00000381196 LDHBP07195 334 aaKnown RBP5.34□□□□□ -1.56
PTPRD-203ENST00000381196 KRT4P19013 534 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 DNM2P50570 870 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 SPIDRQ14159 915 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 PARP10Q53GL7 1025 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 C6orf118Q5T5N4 469 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 FAM196AQ6ZSG2 479 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 FRA10AC1Q70Z53 315 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 MTRQ99707 1265 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 TTI1O43156 1089 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 C21orf2O43822 256 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 IGHDP01880 384 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 GHRP10912 638 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 POLR2EP19388 210 aaKnown RBP5.34□□□□□ -1.56
PTPRD-203ENST00000381196 SULF1Q8IWU6 871 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 MRPL50Q8N5N7 158 aaKnown RBP5.34□□□□□ -1.56
PTPRD-203ENST00000381196 TSPYL6Q8N831 410 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 XAGE3Q8WTP9 111 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 PANK2Q9BZ23 570 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 CCDC113Q9H0I3 377 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 C6orf50Q9HD87 102 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 RTEL1Q9NZ71 1219 aa5.34□□□□□ -1.56
PTPRD-203ENST00000381196 PUF60Q9UHX1 559 aaKnown RBP5.34□□□□□ -1.56
PTPRD-203ENST00000381196 RIMBP3CA6NJZ7 1639 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms