RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 LCTP09848 1927 aa22.52■■□□□ 1.19
GTF3A-201ENST00000381140 CCL5P13501 91 aa22.51■■□□□ 1.19
GTF3A-201ENST00000381140 FBXO11Q86XK2 927 aa22.51■■□□□ 1.19
GTF3A-201ENST00000381140 CMTR1Q8N1G2 835 aaKnown RBP22.51■■□□□ 1.19
GTF3A-201ENST00000381140 FANCBQ8NB91 859 aa22.51■■□□□ 1.19
GTF3A-201ENST00000381140 PIGSQ96S52 555 aa22.51■■□□□ 1.19
GTF3A-201ENST00000381140 TMEM106CQ9BVX2 250 aa22.51■■□□□ 1.19
GTF3A-201ENST00000381140 TM6SF1Q9BZW5 370 aa22.51■■□□□ 1.19
GTF3A-201ENST00000381140 UNC93B1Q9H1C4 597 aa22.51■■□□□ 1.19
GTF3A-201ENST00000381140 A1CFQ9NQ94 594 aaKnown RBP22.51■■□□□ 1.19
GTF3A-201ENST00000381140 PNMA2Q9UL42 364 aa22.51■■□□□ 1.19
GTF3A-201ENST00000381140 GOLGA8AA7E2F4 631 aa22.5■■□□□ 1.19
GTF3A-201ENST00000381140 GOLGA8BA8MQT2 603 aa22.5■■□□□ 1.19
GTF3A-201ENST00000381140 NFIBO00712 420 aa22.5■■□□□ 1.19
GTF3A-201ENST00000381140 CYTH3O43739 400 aa22.5■■□□□ 1.19
GTF3A-201ENST00000381140 GNAQP50148 359 aa22.5■■□□□ 1.19
GTF3A-201ENST00000381140 RTN1Q16799 776 aa22.5■■□□□ 1.19
GTF3A-201ENST00000381140 MFSD14CQ5VZR4 134 aa22.5■■□□□ 1.19
GTF3A-201ENST00000381140 CCDC82Q8N4S0 544 aa22.5■■□□□ 1.19
GTF3A-201ENST00000381140 RNF208Q9H0X6 261 aa22.5■■□□□ 1.19
GTF3A-201ENST00000381140 ZBTB5O15062 677 aa22.5■■□□□ 1.19
GTF3A-201ENST00000381140 PRKAR2AP13861 404 aaKnown RBP22.5■■□□□ 1.19
GTF3A-201ENST00000381140 CYP2C19P33261 490 aa22.5■■□□□ 1.19
GTF3A-201ENST00000381140 ANAPC15P60006 121 aa22.5■■□□□ 1.19
GTF3A-201ENST00000381140 ZNF792Q3KQV3 632 aa22.5■■□□□ 1.19
GTF3A-201ENST00000381140 MAML3Q96JK9 1138 aa22.5■■□□□ 1.19
GTF3A-201ENST00000381140 RIOX1Q9H6W3 641 aa22.5■■□□□ 1.19
GTF3A-201ENST00000381140 PDRG1Q9NUG6 133 aa22.5■■□□□ 1.19
GTF3A-201ENST00000381140 PTPDC1A2A3K4 754 aa22.49■■□□□ 1.19
GTF3A-201ENST00000381140 POTEB2H3BUK9 544 aa22.49■■□□□ 1.19
GTF3A-201ENST00000381140 SRBD1Q8N5C6 995 aaKnown RBP22.49■■□□□ 1.19
GTF3A-201ENST00000381140 CLEC4DQ8WXI8 215 aa22.49■■□□□ 1.19
GTF3A-201ENST00000381140 LZTS2Q9BRK4 669 aa22.49■■□□□ 1.19
GTF3A-201ENST00000381140 LARP6Q9BRS8 491 aaKnown RBP22.49■■□□□ 1.19
GTF3A-201ENST00000381140 AMNQ9BXJ7 453 aa22.49■■□□□ 1.19
GTF3A-201ENST00000381140 UPF2Q9HAU5 1272 aaKnown RBP22.49■■□□□ 1.19
GTF3A-201ENST00000381140 RBM19Q9Y4C8 960 aaKnown RBP22.49■■□□□ 1.19
GTF3A-201ENST00000381140 PFASO15067 1338 aa22.49■■□□□ 1.19
GTF3A-201ENST00000381140 ABCB11O95342 1321 aa22.49■■□□□ 1.19
GTF3A-201ENST00000381140 DNAJC25-GNG10A0A024R161 153 aa22.48■■□□□ 1.19
GTF3A-201ENST00000381140 PPP1R11O60927 126 aaPredicted RBP22.48■■□□□ 1.19
GTF3A-201ENST00000381140 CNTN2Q02246 1040 aa22.48■■□□□ 1.19
GTF3A-201ENST00000381140 CACNB2Q08289 660 aaPredicted RBP22.48■■□□□ 1.19
GTF3A-201ENST00000381140 OLFML2BQ68BL8 750 aa22.48■■□□□ 1.19
GTF3A-201ENST00000381140 TMTC3Q6ZXV5 915 aa22.48■■□□□ 1.19
GTF3A-201ENST00000381140 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.48■■□□□ 1.19
GTF3A-201ENST00000381140 MTMR8Q96EF0 704 aa22.48■■□□□ 1.19
GTF3A-201ENST00000381140 RRP36Q96EU6 259 aaKnown RBP22.48■■□□□ 1.19
GTF3A-201ENST00000381140 SPZ1Q9BXG8 430 aa22.48■■□□□ 1.19
GTF3A-201ENST00000381140 CALML3P27482 149 aa22.47■■□□□ 1.19
GTF3A-201ENST00000381140 METAP2P50579 478 aaKnown RBP eCLIP22.47■■□□□ 1.19
GTF3A-201ENST00000381140 BAATQ14032 418 aaPredicted RBP22.47■■□□□ 1.19
GTF3A-201ENST00000381140 TOB2Q14106 344 aaPredicted RBP22.47■■□□□ 1.19
GTF3A-201ENST00000381140 SLC30A10Q6XR72 485 aa22.47■■□□□ 1.19
GTF3A-201ENST00000381140 HMX1Q9NP08 348 aaPredicted RBP22.47■■□□□ 1.19
GTF3A-201ENST00000381140 RBM28Q9NW13 759 aaKnown RBP22.47■■□□□ 1.19
GTF3A-201ENST00000381140 CYP39A1Q9NYL5 469 aa22.47■■□□□ 1.19
GTF3A-201ENST00000381140 SEC63Q9UGP8 760 aaKnown RBP22.47■■□□□ 1.19
GTF3A-201ENST00000381140 PNMA6FA0A0J9YX94 578 aa22.46■■□□□ 1.19
GTF3A-201ENST00000381140 hCG_1642624A0A1W2PR95 340 aa22.46■■□□□ 1.19
GTF3A-201ENST00000381140 POTEFA5A3E0 1075 aa22.46■■□□□ 1.19
GTF3A-201ENST00000381140 RNF207Q6ZRF8 634 aa22.46■■□□□ 1.19
GTF3A-201ENST00000381140 PURBQ96QR8 312 aaKnown RBP22.46■■□□□ 1.19
GTF3A-201ENST00000381140 AGXT2Q9BYV1 514 aa22.46■■□□□ 1.19
GTF3A-201ENST00000381140 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.46■■□□□ 1.19
GTF3A-201ENST00000381140 DIS3Q9Y2L1 958 aaKnown RBP22.46■■□□□ 1.19
GTF3A-201ENST00000381140 MRPL11Q9Y3B7 192 aaKnown RBP22.46■■□□□ 1.19
GTF3A-201ENST00000381140 PCDHA1Q9Y5I3 950 aa22.46■■□□□ 1.19
GTF3A-201ENST00000381140 RPTORQ8N122 1335 aa22.45■■□□□ 1.18
GTF3A-201ENST00000381140 CNGA1P29973 690 aa22.45■■□□□ 1.18
GTF3A-201ENST00000381140 CCND3P30281 292 aaPredicted RBP22.45■■□□□ 1.18
GTF3A-201ENST00000381140 PRAMEF19Q5SWL8 479 aa22.45■■□□□ 1.18
GTF3A-201ENST00000381140 FRMPD3Q5JV73 1810 aa22.45■■□□□ 1.18
GTF3A-201ENST00000381140 SMARCA1P28370 1054 aa22.44■■□□□ 1.18
GTF3A-201ENST00000381140 CDC27P30260 824 aa22.44■■□□□ 1.18
GTF3A-201ENST00000381140 MAP3K21Q5TCX8 1036 aa22.44■■□□□ 1.18
GTF3A-201ENST00000381140 IFFO2Q5TF58 517 aa22.44■■□□□ 1.18
GTF3A-201ENST00000381140 FBXL16Q8N461 479 aa22.44■■□□□ 1.18
GTF3A-201ENST00000381140 FAM133AQ8N9E0 248 aa22.44■■□□□ 1.18
GTF3A-201ENST00000381140 DEFB118Q96PH6 123 aa22.44■■□□□ 1.18
GTF3A-201ENST00000381140 TINF2Q9BSI4 451 aa22.44■■□□□ 1.18
GTF3A-201ENST00000381140 SOWAHBA6NEL2 793 aa22.43■■□□□ 1.18
GTF3A-201ENST00000381140 RPS6P62753 249 aaKnown RBP22.43■■□□□ 1.18
GTF3A-201ENST00000381140 CCT2P78371 535 aaKnown RBP22.43■■□□□ 1.18
GTF3A-201ENST00000381140 NOL8Q76FK4 1167 aaKnown RBP22.43■■□□□ 1.18
GTF3A-201ENST00000381140 TBC1D5Q92609 795 aa22.43■■□□□ 1.18
GTF3A-201ENST00000381140 FGD4Q96M96 766 aa22.43■■□□□ 1.18
GTF3A-201ENST00000381140 C22orf23Q9BZE7 217 aa22.43■■□□□ 1.18
GTF3A-201ENST00000381140 CNTNAP5Q8WYK1 1306 aa22.42■■□□□ 1.18
GTF3A-201ENST00000381140 EN2P19622 333 aaPredicted RBP22.42■■□□□ 1.18
GTF3A-201ENST00000381140 ADD1P35611 737 aaKnown RBP22.42■■□□□ 1.18
GTF3A-201ENST00000381140 RCAN1P53805 252 aa22.42■■□□□ 1.18
GTF3A-201ENST00000381140 TRAF1Q13077 416 aa22.42■■□□□ 1.18
GTF3A-201ENST00000381140 STK3Q13188 491 aa22.42■■□□□ 1.18
GTF3A-201ENST00000381140 MCF2L2Q86YR7 1114 aa22.42■■□□□ 1.18
GTF3A-201ENST00000381140 TRPV1Q8NER1 839 aa22.42■■□□□ 1.18
GTF3A-201ENST00000381140 FAM217BQ9NTX9 383 aaPredicted RBP22.42■■□□□ 1.18
GTF3A-201ENST00000381140 DDX49Q9Y6V7 483 aaKnown RBP22.42■■□□□ 1.18
GTF3A-201ENST00000381140 CCDC196A0A1B0GTZ2 297 aa22.41■■□□□ 1.18
GTF3A-201ENST00000381140 CFBP00751 764 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms