RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 UBE2SQ16763 222 aa13.6□□□□□ -0.23
GABPB1-203ENST00000380877 SUPT20HL1Q3ZLR7 823 aa13.6□□□□□ -0.23
GABPB1-203ENST00000380877 C12orf60Q5U649 245 aa13.6□□□□□ -0.23
GABPB1-203ENST00000380877 GPIHBP1Q8IV16 184 aa13.6□□□□□ -0.23
GABPB1-203ENST00000380877 EEF2KMTQ96G04 330 aa13.6□□□□□ -0.23
GABPB1-203ENST00000380877 TSGA10Q9BZW7 698 aa13.6□□□□□ -0.23
GABPB1-203ENST00000380877 ATP6V0A2Q9Y487 856 aa13.6□□□□□ -0.23
GABPB1-203ENST00000380877 LONRF3Q496Y0 759 aa13.6□□□□□ -0.23
GABPB1-203ENST00000380877 WDR44Q5JSH3 913 aa13.6□□□□□ -0.23
GABPB1-203ENST00000380877 GADL1Q6ZQY3 521 aa13.6□□□□□ -0.23
GABPB1-203ENST00000380877 CCDC113Q9H0I3 377 aa13.6□□□□□ -0.23
GABPB1-203ENST00000380877 LRCH2Q5VUJ6 765 aa13.6□□□□□ -0.23
GABPB1-203ENST00000380877 COL4A3BPQ9Y5P4 624 aa13.6□□□□□ -0.23
GABPB1-203ENST00000380877 ASNSP08243 561 aa13.6□□□□□ -0.23
GABPB1-203ENST00000380877 PTPREP23469 700 aa13.6□□□□□ -0.23
GABPB1-203ENST00000380877 ASIC2Q16515 512 aa13.6□□□□□ -0.23
GABPB1-203ENST00000380877 OTUD6AQ7L8S5 288 aa13.6□□□□□ -0.23
GABPB1-203ENST00000380877 SH3GLB2Q9NR46 395 aa13.6□□□□□ -0.23
GABPB1-203ENST00000380877 USP14P54578 494 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 CLEC17AQ6ZS10 378 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 GLG1Q92896 1179 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 SLF1Q9BQI6 1058 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 NLRC4Q9NPP4 1024 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 ZNF277Q9NRM2 450 aaPredicted RBP13.59□□□□□ -0.23
GABPB1-203ENST00000380877 LARSQ9P2J5 1176 aaKnown RBP13.59□□□□□ -0.23
GABPB1-203ENST00000380877 GINS2Q9Y248 185 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 SUGT1Q9Y2Z0 365 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 TMEM110-MUSTN1A8MSY1 372 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 GNA14O95837 355 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 DNM2P50570 870 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 GRIPAP1Q4V328 841 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 ARL6IP4Q66PJ3 421 aaKnown RBP13.59□□□□□ -0.23
GABPB1-203ENST00000380877 FAM178BQ8IXR5 827 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 SMYD4Q8IYR2 804 aaPredicted RBP13.59□□□□□ -0.23
GABPB1-203ENST00000380877 NEDD1Q8NHV4 660 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 MAGEA1P43355 309 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 PABPC4Q13310 644 aaKnown RBP eCLIP13.59□□□□□ -0.232e-11■■□□□ 12.3
GABPB1-203ENST00000380877 SEPT2Q15019 361 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 RDH13Q8NBN7 331 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 OR8K1Q8NGG5 319 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 SALL3Q9BXA9 1300 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 IKBKBO14920 756 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 IGSF3O75054 1194 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 TNFAIP3P21580 790 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 BRDTQ58F21 947 aaPredicted RBP13.59□□□□□ -0.23
GABPB1-203ENST00000380877 DPH6Q7L8W6 267 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 OXER1Q8TDS5 423 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 ARMCX3Q9UH62 379 aaPredicted RBP13.59□□□□□ -0.23
GABPB1-203ENST00000380877 CEP83Q9Y592 693 aa13.59□□□□□ -0.23
GABPB1-203ENST00000380877 XKR9Q5GH70 373 aa13.58□□□□□ -0.24
GABPB1-203ENST00000380877 HOOK3Q86VS8 718 aa13.58□□□□□ -0.24
GABPB1-203ENST00000380877 CCDC51Q96ER9 411 aa13.58□□□□□ -0.24
GABPB1-203ENST00000380877 IWS1Q96ST2 819 aa13.58□□□□□ -0.24
GABPB1-203ENST00000380877 RABGAP1Q9Y3P9 1069 aa13.58□□□□□ -0.24
GABPB1-203ENST00000380877 C3P01024 1663 aa13.58□□□□□ -0.24
GABPB1-203ENST00000380877 BCL9O00512 1426 aa13.58□□□□□ -0.24
GABPB1-203ENST00000380877 KRT5P13647 590 aa13.58□□□□□ -0.24
GABPB1-203ENST00000380877 CASP7P55210 303 aa13.58□□□□□ -0.24
GABPB1-203ENST00000380877 RRAGAQ7L523 313 aa13.58□□□□□ -0.24
GABPB1-203ENST00000380877 JAKMIP2Q96AA8 810 aa13.58□□□□□ -0.24
GABPB1-203ENST00000380877 EPB41L4AQ9HCS5 686 aaPredicted RBP13.58□□□□□ -0.24
GABPB1-203ENST00000380877 MAN1B1Q9UKM7 699 aa13.58□□□□□ -0.24
GABPB1-203ENST00000380877 DAGLAQ9Y4D2 1042 aa13.58□□□□□ -0.24
GABPB1-203ENST00000380877 XRCC5P13010 732 aaKnown RBP13.58□□□□□ -0.24
GABPB1-203ENST00000380877 GBP2P32456 591 aaPredicted RBP13.58□□□□□ -0.24
GABPB1-203ENST00000380877 KLHL30Q0D2K2 578 aa13.58□□□□□ -0.24
GABPB1-203ENST00000380877 GRM4Q14833 912 aa13.58□□□□□ -0.24
GABPB1-203ENST00000380877 NAPGQ99747 312 aaPredicted RBP13.58□□□□□ -0.24
GABPB1-203ENST00000380877 EEF2P13639 858 aaKnown RBP13.57□□□□□ -0.24
GABPB1-203ENST00000380877 GJC1P36383 396 aa13.57□□□□□ -0.24
GABPB1-203ENST00000380877 CYP2J2P51589 502 aa13.57□□□□□ -0.24
GABPB1-203ENST00000380877 TUBB4BP68371 445 aa13.57□□□□□ -0.24
GABPB1-203ENST00000380877 STK17AQ9UEE5 414 aa13.57□□□□□ -0.24
GABPB1-203ENST00000380877 MCM6Q14566 821 aa13.57□□□□□ -0.24
GABPB1-203ENST00000380877 FAM160B2Q86V87 743 aa13.57□□□□□ -0.24
GABPB1-203ENST00000380877 IGDCC4Q8TDY8 1250 aa13.57□□□□□ -0.24
GABPB1-203ENST00000380877 MLXIPQ9HAP2 919 aa13.57□□□□□ -0.24
GABPB1-203ENST00000380877 BCCIPQ9P287 314 aaKnown RBP eCLIP13.57□□□□□ -0.24
GABPB1-203ENST00000380877 KIAA0754O94854 1291 aa13.57□□□□□ -0.24
GABPB1-203ENST00000380877 NCAPG2Q86XI2 1143 aa13.57□□□□□ -0.24
GABPB1-203ENST00000380877 IQCDQ96DY2 449 aa13.57□□□□□ -0.24
GABPB1-203ENST00000380877 KCNG1Q9UIX4 513 aa13.57□□□□□ -0.24
GABPB1-203ENST00000380877 FAM102BQ5T8I3 360 aa13.57□□□□□ -0.24
GABPB1-203ENST00000380877 MAATS1Q7Z4T9 603 aa13.57□□□□□ -0.24
GABPB1-203ENST00000380877 DCAF4Q8WV16 495 aa13.57□□□□□ -0.24
GABPB1-203ENST00000380877 ZNF577Q9BSK1 485 aa13.57□□□□□ -0.24
GABPB1-203ENST00000380877 ZNF341Q9BYN7 854 aa13.57□□□□□ -0.24
GABPB1-203ENST00000380877 ANO3Q9BYT9 981 aa13.57□□□□□ -0.24
GABPB1-203ENST00000380877 SPDYE4A6NLX3 237 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 ZBTB5O15062 677 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 COBLO75128 1261 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 RHOXF2BP0C7M4 288 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 ACTN2P35609 894 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 KIFAP3Q92845 792 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 RHOXF2Q9BQY4 288 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 SLC10A5Q5PT55 438 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 RESP18Q5W5W9 173 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 LRRC8AQ8IWT6 810 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 WDR11Q9BZH6 1224 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 NUCKS1Q9H1E3 243 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms