RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 KATNBL1Q9H079 304 aa20.33■□□□□ 0.84
HMGN1-204ENST00000380749 ICAM1P05362 532 aa20.32■□□□□ 0.84
HMGN1-204ENST00000380749 SNAP25P60880 206 aa20.32■□□□□ 0.84
HMGN1-204ENST00000380749 HAND2P61296 217 aa20.32■□□□□ 0.84
HMGN1-204ENST00000380749 B4GALNT3Q6L9W6 998 aa20.32■□□□□ 0.84
HMGN1-204ENST00000380749 TCP11L1Q9NUJ3 509 aa20.32■□□□□ 0.84
HMGN1-204ENST00000380749 ASGR1P07306 291 aa20.31■□□□□ 0.84
HMGN1-204ENST00000380749 FPGSQ05932 587 aa20.31■□□□□ 0.84
HMGN1-204ENST00000380749 GNASQ5JWF2 1037 aa20.31■□□□□ 0.84
HMGN1-204ENST00000380749 SYDE2Q5VT97 1194 aa20.31■□□□□ 0.84
HMGN1-204ENST00000380749 NSMFQ6X4W1 530 aa20.31■□□□□ 0.84
HMGN1-204ENST00000380749 MFSD6Q6ZSS7 791 aa20.31■□□□□ 0.84
HMGN1-204ENST00000380749 NOL8Q76FK4 1167 aaKnown RBP20.31■□□□□ 0.84
HMGN1-204ENST00000380749 TMEM47Q9BQJ4 181 aa20.31■□□□□ 0.84
HMGN1-204ENST00000380749 RANBP17Q9H2T7 1088 aaKnown RBP20.31■□□□□ 0.84
HMGN1-204ENST00000380749 RNF41Q9H4P4 317 aaPredicted RBP20.31■□□□□ 0.84
HMGN1-204ENST00000380749 CYP39A1Q9NYL5 469 aa20.31■□□□□ 0.84
HMGN1-204ENST00000380749 A0A0U1RQG5 324 aaPredicted RBP20.3■□□□□ 0.84
HMGN1-204ENST00000380749 SOWAHBA6NEL2 793 aa20.3■□□□□ 0.84
HMGN1-204ENST00000380749 TNFAIP2Q03169 654 aa20.3■□□□□ 0.84
HMGN1-204ENST00000380749 FAAP100Q0VG06 881 aa20.3■□□□□ 0.84
HMGN1-204ENST00000380749 MUM1L1Q5H9M0 696 aa20.3■□□□□ 0.84
HMGN1-204ENST00000380749 AKNAD1Q5T1N1 836 aa20.3■□□□□ 0.84
HMGN1-204ENST00000380749 BTNL9Q6UXG8 535 aa20.3■□□□□ 0.84
HMGN1-204ENST00000380749 CHD1LQ86WJ1 897 aa20.3■□□□□ 0.84
HMGN1-204ENST00000380749 VTI1AQ96AJ9 217 aa20.3■□□□□ 0.84
HMGN1-204ENST00000380749 FRMPD2Q68DX3 1309 aaPredicted RBP20.29■□□□□ 0.84
HMGN1-204ENST00000380749 ITGB8P26012 769 aa20.29■□□□□ 0.84
HMGN1-204ENST00000380749 SLC16A2P36021 539 aa20.29■□□□□ 0.84
HMGN1-204ENST00000380749 RNPC3Q96LT9 517 aaKnown RBP20.29■□□□□ 0.84
HMGN1-204ENST00000380749 PNMA2Q9UL42 364 aa20.29■□□□□ 0.84
HMGN1-204ENST00000380749 KIAA1217Q5T5P2 1943 aa20.28■□□□□ 0.84
HMGN1-204ENST00000380749 SDSP20132 328 aa20.28■□□□□ 0.84
HMGN1-204ENST00000380749 IRX5P78411 483 aaPredicted RBP20.28■□□□□ 0.84
HMGN1-204ENST00000380749 SMAD3P84022 425 aaKnown RBP20.28■□□□□ 0.84
HMGN1-204ENST00000380749 TTBK2Q6IQ55 1244 aa20.28■□□□□ 0.84
HMGN1-204ENST00000380749 TLK2Q86UE8 772 aa20.28■□□□□ 0.84
HMGN1-204ENST00000380749 ESR2Q92731 530 aa20.28■□□□□ 0.84
HMGN1-204ENST00000380749 OSBPL3Q9H4L5 887 aa20.28■□□□□ 0.84
HMGN1-204ENST00000380749 GPCPD1Q9NPB8 672 aa20.28■□□□□ 0.84
HMGN1-204ENST00000380749 DIAPH3Q9NSV4 1193 aa20.28■□□□□ 0.84
HMGN1-204ENST00000380749 ADD3Q9UEY8 706 aaKnown RBP20.28■□□□□ 0.84
HMGN1-204ENST00000380749 GBF1Q92538 1859 aa20.28■□□□□ 0.84
HMGN1-204ENST00000380749 ASTN1O14525 1302 aa20.27■□□□□ 0.84
HMGN1-204ENST00000380749 ARVCFO00192 962 aa20.27■□□□□ 0.84
HMGN1-204ENST00000380749 TLR3O15455 904 aaKnown RBP20.27■□□□□ 0.84
HMGN1-204ENST00000380749 PDHBP11177 359 aa20.27■□□□□ 0.84
HMGN1-204ENST00000380749 NT5C2P49902 561 aa20.27■□□□□ 0.84
HMGN1-204ENST00000380749 NKX3-2P78367 333 aa20.27■□□□□ 0.84
HMGN1-204ENST00000380749 NUCB1Q02818 461 aa20.27■□□□□ 0.84
HMGN1-204ENST00000380749 TBC1D10CQ8IV04 446 aa20.27■□□□□ 0.84
HMGN1-204ENST00000380749 PLEKHM2Q8IWE5 1019 aa20.27■□□□□ 0.84
HMGN1-204ENST00000380749 FBXO16Q8IX29 292 aaPredicted RBP20.27■□□□□ 0.84
HMGN1-204ENST00000380749 FAM161BQ96MY7 647 aa20.27■□□□□ 0.84
HMGN1-204ENST00000380749 TTC14Q96N46 770 aa20.27■□□□□ 0.84
HMGN1-204ENST00000380749 GUCD1Q96NT3 240 aa20.27■□□□□ 0.84
HMGN1-204ENST00000380749 AP5M1Q9H0R1 490 aa20.27■□□□□ 0.84
HMGN1-204ENST00000380749 VTA1Q9NP79 307 aa20.27■□□□□ 0.84
HMGN1-204ENST00000380749 TBX21Q9UL17 535 aa20.27■□□□□ 0.84
HMGN1-204ENST00000380749 VCANP13611 3396 aa20.27■□□□□ 0.84
HMGN1-204ENST00000380749 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.26■□□□□ 0.83
HMGN1-204ENST00000380749 HIP1O00291 1037 aa20.26■□□□□ 0.83
HMGN1-204ENST00000380749 TIMP1P01033 207 aa20.26■□□□□ 0.83
HMGN1-204ENST00000380749 BEX3Q00994 111 aa20.26■□□□□ 0.83
HMGN1-204ENST00000380749 GNEQ9Y223 722 aaKnown RBP20.26■□□□□ 0.83
HMGN1-204ENST00000380749 NEDD4P46934 1319 aa20.25■□□□□ 0.83
HMGN1-204ENST00000380749 LOC102724159A0A0B4J2E5 919 aa20.25■□□□□ 0.83
HMGN1-204ENST00000380749 ZNF213O14771 459 aa20.25■□□□□ 0.83
HMGN1-204ENST00000380749 CTAGE5O15320 804 aa20.25■□□□□ 0.83
HMGN1-204ENST00000380749 ZEB2O60315 1214 aa20.25■□□□□ 0.83
HMGN1-204ENST00000380749 CABYRO75952 493 aa20.25■□□□□ 0.83
HMGN1-204ENST00000380749 CDK7P50613 346 aa20.25■□□□□ 0.83
HMGN1-204ENST00000380749 ZNF543Q08ER8 600 aa20.25■□□□□ 0.83
HMGN1-204ENST00000380749 PWP2Q15269 919 aaKnown RBP20.25■□□□□ 0.83
HMGN1-204ENST00000380749 FSCN1Q16658 493 aaKnown RBP20.25■□□□□ 0.83
HMGN1-204ENST00000380749 EEPD1Q7L9B9 569 aa20.25■□□□□ 0.83
HMGN1-204ENST00000380749 SCN10AQ9Y5Y9 1956 aa20.25■□□□□ 0.83
HMGN1-204ENST00000380749 WDR19Q8NEZ3 1342 aa20.25■□□□□ 0.83
HMGN1-204ENST00000380749 PTPDC1A2A3K4 754 aa20.24■□□□□ 0.83
HMGN1-204ENST00000380749 NFIBO00712 420 aa20.24■□□□□ 0.83
HMGN1-204ENST00000380749 EPHB4P54760 987 aa20.24■□□□□ 0.83
HMGN1-204ENST00000380749 CCDC178Q5BJE1 867 aa20.24■□□□□ 0.83
HMGN1-204ENST00000380749 IQSEC1Q6DN90 963 aa20.24■□□□□ 0.83
HMGN1-204ENST00000380749 CWC27Q6UX04 472 aaKnown RBP20.24■□□□□ 0.83
HMGN1-204ENST00000380749 FAM126BQ8IXS8 530 aa20.24■□□□□ 0.83
HMGN1-204ENST00000380749 MPHOSPH6Q99547 160 aaKnown RBP20.24■□□□□ 0.83
HMGN1-204ENST00000380749 SNHG28P0DPA3 235 aa20.23■□□□□ 0.83
HMGN1-204ENST00000380749 SMPD1P17405 629 aa20.23■□□□□ 0.83
HMGN1-204ENST00000380749 ALDH5A1P51649 535 aaPredicted RBP20.23■□□□□ 0.83
HMGN1-204ENST00000380749 PPIGQ13427 754 aaKnown RBP eCLIP20.23■□□□□ 0.835e-19■■□□□ 12
HMGN1-204ENST00000380749 BAATQ14032 418 aaPredicted RBP20.23■□□□□ 0.83
HMGN1-204ENST00000380749 GPATCH4Q5T3I0 446 aaKnown RBP20.23■□□□□ 0.83
HMGN1-204ENST00000380749 MFSD5Q6N075 450 aa20.23■□□□□ 0.83
HMGN1-204ENST00000380749 CXCL17Q6UXB2 119 aa20.23■□□□□ 0.83
HMGN1-204ENST00000380749 IQCA1Q86XH1 822 aa20.23■□□□□ 0.83
HMGN1-204ENST00000380749 EXOC6Q8TAG9 804 aa20.23■□□□□ 0.83
HMGN1-204ENST00000380749 MORC4Q8TE76 937 aa20.23■□□□□ 0.83
HMGN1-204ENST00000380749 Q9Y3F1 56 aa20.23■□□□□ 0.83
HMGN1-204ENST00000380749 DDX49Q9Y6V7 483 aaKnown RBP20.23■□□□□ 0.83
HMGN1-204ENST00000380749 TMEM265A0A087WTH1 108 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms