RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 DYNC1LI2O43237 492 aaPredicted RBP20.78■□□□□ 0.92
HMGN1-203ENST00000380748 SMPD1P17405 629 aa20.78■□□□□ 0.92
HMGN1-203ENST00000380748 DEFB128Q7Z7B8 93 aa20.78■□□□□ 0.92
HMGN1-203ENST00000380748 STK11IPQ8N1F8 1099 aa20.78■□□□□ 0.92
HMGN1-203ENST00000380748 FAM133AQ8N9E0 248 aa20.78■□□□□ 0.92
HMGN1-203ENST00000380748 AP5M1Q9H0R1 490 aa20.78■□□□□ 0.92
HMGN1-203ENST00000380748 SCN5AQ14524 2016 aa20.78■□□□□ 0.92
HMGN1-203ENST00000380748 BRWD1Q9NSI6 2320 aa20.77■□□□□ 0.92
HMGN1-203ENST00000380748 MYH4Q9Y623 1939 aa20.77■□□□□ 0.92
HMGN1-203ENST00000380748 GPR37L1O60883 481 aa20.77■□□□□ 0.92
HMGN1-203ENST00000380748 TMEM63BQ5T3F8 832 aa20.77■□□□□ 0.92
HMGN1-203ENST00000380748 CLASRPQ8N2M8 674 aaKnown RBP20.77■□□□□ 0.92
HMGN1-203ENST00000380748 ARNTL2Q8WYA1 636 aa20.77■□□□□ 0.92
HMGN1-203ENST00000380748 SEZ6LQ9BYH1 1024 aa20.77■□□□□ 0.92
HMGN1-203ENST00000380748 ALDH8A1Q9H2A2 487 aaPredicted RBP20.77■□□□□ 0.92
HMGN1-203ENST00000380748 BOLA2Q9H3K6 86 aa20.77■□□□□ 0.92
HMGN1-203ENST00000380748 PDGFCQ9NRA1 345 aa20.77■□□□□ 0.92
HMGN1-203ENST00000380748 CLIP2Q9UDT6 1046 aa20.77■□□□□ 0.92
HMGN1-203ENST00000380748 ZEB2O60315 1214 aa20.76■□□□□ 0.91
HMGN1-203ENST00000380748 IFIT2P09913 472 aaKnown RBP20.76■□□□□ 0.91
HMGN1-203ENST00000380748 CYP2C9P11712 490 aa20.76■□□□□ 0.91
HMGN1-203ENST00000380748 OAZ1P54368 228 aa20.76■□□□□ 0.91
HMGN1-203ENST00000380748 HLA-CQ95604 372 aa20.76■□□□□ 0.91
HMGN1-203ENST00000380748 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.76■□□□□ 0.91
HMGN1-203ENST00000380748 A1CFQ9NQ94 594 aaKnown RBP20.76■□□□□ 0.91
HMGN1-203ENST00000380748 TRMT13Q9NUP7 481 aaKnown RBP20.76■□□□□ 0.91
HMGN1-203ENST00000380748 ARPP21Q9UBL0 812 aaPredicted RBP20.76■□□□□ 0.91
HMGN1-203ENST00000380748 FEM1BQ9UK73 627 aa20.76■□□□□ 0.91
HMGN1-203ENST00000380748 MYH7P12883 1935 aa20.75■□□□□ 0.91
HMGN1-203ENST00000380748 PFKMP08237 780 aa20.75■□□□□ 0.91
HMGN1-203ENST00000380748 TAP1Q03518 808 aa20.75■□□□□ 0.91
HMGN1-203ENST00000380748 HSP90AB4PQ58FF6 505 aa20.75■□□□□ 0.91
HMGN1-203ENST00000380748 ACAD9Q9H845 621 aa20.75■□□□□ 0.91
HMGN1-203ENST00000380748 IGKV6D-41A0A0C4DH26 115 aa20.74■□□□□ 0.91
HMGN1-203ENST00000380748 ASB14A6NK59 587 aa20.74■□□□□ 0.91
HMGN1-203ENST00000380748 UBE3CQ15386 1083 aa20.74■□□□□ 0.91
HMGN1-203ENST00000380748 TAPT1Q6NXT6 567 aa20.74■□□□□ 0.91
HMGN1-203ENST00000380748 EEPD1Q7L9B9 569 aa20.74■□□□□ 0.91
HMGN1-203ENST00000380748 SPRED2Q7Z698 418 aa20.74■□□□□ 0.91
HMGN1-203ENST00000380748 FBXO16Q8IX29 292 aaPredicted RBP20.74■□□□□ 0.91
HMGN1-203ENST00000380748 PUS7LQ9H0K6 701 aaKnown RBP20.74■□□□□ 0.91
HMGN1-203ENST00000380748 MKNK2Q9HBH9 465 aa20.74■□□□□ 0.91
HMGN1-203ENST00000380748 CD320Q9NPF0 282 aa20.74■□□□□ 0.91
HMGN1-203ENST00000380748 RNF146Q9NTX7 359 aa20.74■□□□□ 0.91
HMGN1-203ENST00000380748 COL4A4P53420 1690 aaPredicted RBP20.73■□□□□ 0.91
HMGN1-203ENST00000380748 GRB10Q13322 594 aa20.73■□□□□ 0.91
HMGN1-203ENST00000380748 ALYREFQ86V81 257 aaKnown RBP20.73■□□□□ 0.91
HMGN1-203ENST00000380748 LRRC47Q8N1G4 583 aaKnown RBP20.73■□□□□ 0.91
HMGN1-203ENST00000380748 KIF1BPQ96EK5 621 aa20.73■□□□□ 0.91
HMGN1-203ENST00000380748 SLC9A7Q96T83 725 aa20.73■□□□□ 0.91
HMGN1-203ENST00000380748 COG6Q9Y2V7 657 aa20.73■□□□□ 0.91
HMGN1-203ENST00000380748 TNKSO95271 1327 aa20.73■□□□□ 0.91
HMGN1-203ENST00000380748 HAUS7Q99871 368 aa20.72■□□□□ 0.91
HMGN1-203ENST00000380748 LPXNO60711 386 aa20.71■□□□□ 0.91
HMGN1-203ENST00000380748 ACTN1P12814 892 aa20.71■□□□□ 0.91
HMGN1-203ENST00000380748 ATP5JP18859 108 aa20.71■□□□□ 0.91
HMGN1-203ENST00000380748 SBK1Q52WX2 424 aa20.71■□□□□ 0.91
HMGN1-203ENST00000380748 IQSEC1Q6DN90 963 aa20.71■□□□□ 0.91
HMGN1-203ENST00000380748 HERC6Q8IVU3 1022 aa20.71■□□□□ 0.91
HMGN1-203ENST00000380748 PHOSPHO2Q8TCD6 241 aa20.71■□□□□ 0.91
HMGN1-203ENST00000380748 MKL1Q969V6 931 aa20.71■□□□□ 0.91
HMGN1-203ENST00000380748 CEP95Q96GE4 821 aa20.71■□□□□ 0.91
HMGN1-203ENST00000380748 Q9Y3F1 56 aa20.71■□□□□ 0.91
HMGN1-203ENST00000380748 ZNF536O15090 1300 aa20.71■□□□□ 0.91
HMGN1-203ENST00000380748 MINDY4BA8MYZ0 360 aa20.7■□□□□ 0.9
HMGN1-203ENST00000380748 PI4K2BG5E9Z4 385 aa20.7■□□□□ 0.9
HMGN1-203ENST00000380748 SUPT20HL2P0C7V6 817 aa20.7■□□□□ 0.9
HMGN1-203ENST00000380748 BMP3P12645 472 aa20.7■□□□□ 0.9
HMGN1-203ENST00000380748 GMCL1P1Q8NEA9 526 aa20.7■□□□□ 0.9
HMGN1-203ENST00000380748 MTMR4Q9NYA4 1195 aa20.7■□□□□ 0.9
HMGN1-203ENST00000380748 ISY1Q9ULR0 285 aaKnown RBP20.7■□□□□ 0.9
HMGN1-203ENST00000380748 LCTP09848 1927 aa20.7■□□□□ 0.9
HMGN1-203ENST00000380748 TANC1Q9C0D5 1861 aa20.69■□□□□ 0.9
HMGN1-203ENST00000380748 GSG1L2A8MUP6 293 aa20.69■□□□□ 0.9
HMGN1-203ENST00000380748 TMEM232C9JQI7 657 aa20.69■□□□□ 0.9
HMGN1-203ENST00000380748 PRDM1O75626 825 aa20.69■□□□□ 0.9
HMGN1-203ENST00000380748 SLFN13Q68D06 897 aa20.69■□□□□ 0.9
HMGN1-203ENST00000380748 PPP1R13LQ8WUF5 828 aa20.69■□□□□ 0.9
HMGN1-203ENST00000380748 CHMP4CQ96CF2 233 aa20.69■□□□□ 0.9
HMGN1-203ENST00000380748 TRERF1Q96PN7 1200 aa20.69■□□□□ 0.9
HMGN1-203ENST00000380748 PURBQ96QR8 312 aaKnown RBP20.69■□□□□ 0.9
HMGN1-203ENST00000380748 STRBPQ96SI9 672 aaKnown RBP20.69■□□□□ 0.9
HMGN1-203ENST00000380748 TET1Q8NFU7 2136 aa20.69■□□□□ 0.9
HMGN1-203ENST00000380748 ALAS1P13196 640 aa20.68■□□□□ 0.9
HMGN1-203ENST00000380748 RFC2P35250 354 aa20.68■□□□□ 0.9
HMGN1-203ENST00000380748 PURAQ00577 322 aaKnown RBP20.68■□□□□ 0.9
HMGN1-203ENST00000380748 MUM1L1Q5H9M0 696 aa20.68■□□□□ 0.9
HMGN1-203ENST00000380748 KIAA1211Q6ZU35 1233 aa20.68■□□□□ 0.9
HMGN1-203ENST00000380748 RPAP2Q8IXW5 612 aaPredicted RBP20.68■□□□□ 0.9
HMGN1-203ENST00000380748 GDPD5Q8WTR4 605 aa20.68■□□□□ 0.9
HMGN1-203ENST00000380748 FTOQ9C0B1 505 aaKnown RBP eCLIP20.68■□□□□ 0.97e-6■■□□□ 12.9
HMGN1-203ENST00000380748 VTA1Q9NP79 307 aa20.68■□□□□ 0.9
HMGN1-203ENST00000380748 CYP39A1Q9NYL5 469 aa20.68■□□□□ 0.9
HMGN1-203ENST00000380748 PTPRSQ13332 1948 aa20.68■□□□□ 0.9
HMGN1-203ENST00000380748 KIF28PB7ZC32 967 aa20.67■□□□□ 0.9
HMGN1-203ENST00000380748 TTLL1O95922 423 aa20.67■□□□□ 0.9
HMGN1-203ENST00000380748 MYL3P08590 195 aa20.67■□□□□ 0.9
HMGN1-203ENST00000380748 FDX1P10109 184 aa20.67■□□□□ 0.9
HMGN1-203ENST00000380748 STAT2P52630 851 aa20.67■□□□□ 0.9
HMGN1-203ENST00000380748 SNAP25P60880 206 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms