RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 TRERF1Q96PN7 1200 aa21.7■■□□□ 1.06
SMN2-202ENST00000380742 EFCC1Q9HA90 598 aa21.7■■□□□ 1.06
SMN2-202ENST00000380742 HOMER2Q9NSB8 354 aa21.7■■□□□ 1.06
SMN2-202ENST00000380742 PNMA2Q9UL42 364 aa21.7■■□□□ 1.06
SMN2-202ENST00000380742 ABCB11O95342 1321 aa21.69■■□□□ 1.06
SMN2-202ENST00000380742 GPR25O00155 361 aa21.69■■□□□ 1.06
SMN2-202ENST00000380742 STXBP3O00186 592 aa21.69■■□□□ 1.06
SMN2-202ENST00000380742 SLC25A27O95847 323 aa21.69■■□□□ 1.06
SMN2-202ENST00000380742 TKFCQ3LXA3 575 aa21.69■■□□□ 1.06
SMN2-202ENST00000380742 CLEC4DQ8WXI8 215 aa21.69■■□□□ 1.06
SMN2-202ENST00000380742 RNF146Q9NTX7 359 aa21.69■■□□□ 1.06
SMN2-202ENST00000380742 BARHL2Q9NY43 387 aa21.69■■□□□ 1.06
SMN2-202ENST00000380742 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.69■■□□□ 1.06
SMN2-202ENST00000380742 LCTP09848 1927 aa21.68■■□□□ 1.06
SMN2-202ENST00000380742 ECM2O94769 699 aaPredicted RBP21.68■■□□□ 1.06
SMN2-202ENST00000380742 HMGN5P82970 282 aaKnown RBP21.68■■□□□ 1.06
SMN2-202ENST00000380742 SP3Q02447 781 aa21.68■■□□□ 1.06
SMN2-202ENST00000380742 TRAF1Q13077 416 aa21.68■■□□□ 1.06
SMN2-202ENST00000380742 BECN1Q14457 450 aa21.68■■□□□ 1.06
SMN2-202ENST00000380742 INTS4Q96HW7 963 aaKnown RBP21.68■■□□□ 1.06
SMN2-202ENST00000380742 MROH8Q9H579 483 aa21.68■■□□□ 1.06
SMN2-202ENST00000380742 FOXD4L1Q9NU39 408 aa21.68■■□□□ 1.06
SMN2-202ENST00000380742 PLXNA1Q9UIW2 1896 aa21.67■■□□□ 1.06
SMN2-202ENST00000380742 OPLAHO14841 1288 aa21.67■■□□□ 1.06
SMN2-202ENST00000380742 CTGFP29279 349 aa21.67■■□□□ 1.06
SMN2-202ENST00000380742 COPB2P35606 906 aa21.67■■□□□ 1.06
SMN2-202ENST00000380742 NOM1Q5C9Z4 860 aaKnown RBP21.67■■□□□ 1.06
SMN2-202ENST00000380742 CHST13Q8NET6 341 aa21.67■■□□□ 1.06
SMN2-202ENST00000380742 ALG1Q9BT22 464 aa21.67■■□□□ 1.06
SMN2-202ENST00000380742 VPS54Q9P1Q0 977 aa21.67■■□□□ 1.06
SMN2-202ENST00000380742 SMC3Q9UQE7 1217 aa21.67■■□□□ 1.06
SMN2-202ENST00000380742 MRPL11Q9Y3B7 192 aaKnown RBP21.67■■□□□ 1.06
SMN2-202ENST00000380742 hCG_1984214I3L0E3 225 aa21.66■■□□□ 1.06
SMN2-202ENST00000380742 NFIBO00712 420 aa21.66■■□□□ 1.06
SMN2-202ENST00000380742 GJB2P29033 226 aa21.66■■□□□ 1.06
SMN2-202ENST00000380742 ANP32AP39687 249 aaKnown RBP21.66■■□□□ 1.06
SMN2-202ENST00000380742 LACTBP83111 547 aaPredicted RBP21.66■■□□□ 1.06
SMN2-202ENST00000380742 CAP1Q01518 475 aa21.66■■□□□ 1.06
SMN2-202ENST00000380742 WDR78Q5VTH9 848 aa21.66■■□□□ 1.06
SMN2-202ENST00000380742 ZNF713Q8N859 430 aaPredicted RBP21.66■■□□□ 1.06
SMN2-202ENST00000380742 WASF1Q92558 559 aa21.66■■□□□ 1.06
SMN2-202ENST00000380742 TBC1D5Q92609 795 aa21.66■■□□□ 1.06
SMN2-202ENST00000380742 ARHGAP39Q9C0H5 1083 aa21.66■■□□□ 1.06
SMN2-202ENST00000380742 ACAD9Q9H845 621 aa21.66■■□□□ 1.06
SMN2-202ENST00000380742 GJB4Q9NTQ9 266 aa21.66■■□□□ 1.06
SMN2-202ENST00000380742 CASP8AP2Q9UKL3 1982 aa21.65■■□□□ 1.06
SMN2-202ENST00000380742 MAPK4P31152 587 aa21.65■■□□□ 1.06
SMN2-202ENST00000380742 NAPAP54920 295 aa21.65■■□□□ 1.06
SMN2-202ENST00000380742 CCAR1Q8IX12 1150 aaKnown RBP21.65■■□□□ 1.06
SMN2-202ENST00000380742 ZNF296Q8WUU4 475 aaPredicted RBP21.65■■□□□ 1.06
SMN2-202ENST00000380742 ZNF236Q9UL36 1845 aa21.64■■□□□ 1.06
SMN2-202ENST00000380742 FKTNO75072 461 aa21.64■■□□□ 1.06
SMN2-202ENST00000380742 PPP1R18Q6NYC8 613 aa21.64■■□□□ 1.06
SMN2-202ENST00000380742 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.64■■□□□ 1.06
SMN2-202ENST00000380742 GPR142Q7Z601 462 aa21.64■■□□□ 1.06
SMN2-202ENST00000380742 FAM184AQ8NB25 1140 aa21.64■■□□□ 1.06
SMN2-202ENST00000380742 SPRYD3Q8NCJ5 442 aa21.64■■□□□ 1.06
SMN2-202ENST00000380742 SH3GLB2Q9NR46 395 aa21.64■■□□□ 1.06
SMN2-202ENST00000380742 FBXO40Q9UH90 709 aa21.64■■□□□ 1.06
SMN2-202ENST00000380742 FOXN1O15353 648 aa21.63■■□□□ 1.05
SMN2-202ENST00000380742 HSPA1AP0DMV8 641 aaKnown RBP21.63■■□□□ 1.05
SMN2-202ENST00000380742 HSPA1BP0DMV9 641 aaKnown RBP21.63■■□□□ 1.05
SMN2-202ENST00000380742 FOSBP53539 338 aa21.63■■□□□ 1.05
SMN2-202ENST00000380742 PLEKHH3Q7Z736 793 aa21.63■■□□□ 1.05
SMN2-202ENST00000380742 CD99L2Q8TCZ2 262 aa21.63■■□□□ 1.05
SMN2-202ENST00000380742 SMCO2A6NFE2 343 aa21.62■■□□□ 1.05
SMN2-202ENST00000380742 ADAMTS3O15072 1205 aa21.62■■□□□ 1.05
SMN2-202ENST00000380742 HSP90AA1P07900 732 aaKnown RBP21.62■■□□□ 1.05
SMN2-202ENST00000380742 PSMC4P43686 418 aa21.62■■□□□ 1.05
SMN2-202ENST00000380742 NSMFQ6X4W1 530 aa21.62■■□□□ 1.05
SMN2-202ENST00000380742 TRIM47Q96LD4 638 aa21.62■■□□□ 1.05
SMN2-202ENST00000380742 A1CFQ9NQ94 594 aaKnown RBP21.62■■□□□ 1.05
SMN2-202ENST00000380742 KCNJ14Q9UNX9 436 aa21.62■■□□□ 1.05
SMN2-202ENST00000380742 ESYT2A0FGR8 921 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 TNPO2O14787 897 aaKnown RBP21.61■■□□□ 1.05
SMN2-202ENST00000380742 CFBP00751 764 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 HSPA8P11142 646 aaKnown RBP21.61■■□□□ 1.05
SMN2-202ENST00000380742 FCER1AP12319 257 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 PTPREP23469 700 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 FCGRTP55899 365 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 MCF2L2Q86YR7 1114 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 ANKRD35Q8N283 1001 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 RGS22Q8NE09 1264 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 CCDC148Q8NFR7 591 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 CCDC12Q8WUD4 166 aaPredicted RBP21.61■■□□□ 1.05
SMN2-202ENST00000380742 MMP19Q99542 508 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 PHF20Q9BVI0 1012 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 ZMYND12Q9H0C1 365 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 PSTPIP2Q9H939 334 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 CWC22Q9HCG8 908 aaKnown RBP21.61■■□□□ 1.05
SMN2-202ENST00000380742 STRNO43815 780 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 HSD17B4P51659 736 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 NLRP5P59047 1200 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 GHRHRQ02643 423 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 BAATQ14032 418 aaPredicted RBP21.61■■□□□ 1.05
SMN2-202ENST00000380742 KIF22Q14807 665 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 NPY5RQ15761 445 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 SLC30A10Q6XR72 485 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 RNF207Q6ZRF8 634 aa21.61■■□□□ 1.05
SMN2-202ENST00000380742 C8orf76Q96K31 380 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms