RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.34□□□□□ -0.75
PTPRA-204ENST00000380393 VCXQ9H320 206 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 SOWAHDA6NJG2 315 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 ZKSCAN1P17029 563 aaPredicted RBP10.34□□□□□ -0.75
PTPRA-204ENST00000380393 PTH1RQ03431 593 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 RCN1Q15293 331 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 SGSM1Q2NKQ1 1148 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 THOC7Q6I9Y2 204 aaKnown RBP10.34□□□□□ -0.75
PTPRA-204ENST00000380393 ARHGAP18Q8N392 663 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 TC2NQ8N9U0 490 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 USP33Q8TEY7 942 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 ARHGEF10LQ9HCE6 1279 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 FBXO9Q9UK97 447 aaPredicted RBP10.34□□□□□ -0.75
PTPRA-204ENST00000380393 SH3TC1Q8TE82 1336 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 FLT4P35916 1363 aa10.34□□□□□ -0.75
PTPRA-204ENST00000380393 USO1O60763 962 aaKnown RBP10.33□□□□□ -0.76
PTPRA-204ENST00000380393 ADAMTS2O95450 1211 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 GHRP10912 638 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 HOXA10P31260 410 aaPredicted RBP10.33□□□□□ -0.76
PTPRA-204ENST00000380393 PSMD7P51665 324 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 PSMC1P62191 440 aaKnown RBP10.33□□□□□ -0.76
PTPRA-204ENST00000380393 PHEXP78562 749 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 ARHGAP27Q6ZUM4 889 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 ABTB1Q969K4 478 aaPredicted RBP10.33□□□□□ -0.76
PTPRA-204ENST00000380393 ZNF653Q96CK0 615 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 MOV10L1Q9BXT6 1211 aaKnown RBP10.33□□□□□ -0.76
PTPRA-204ENST00000380393 CEP131Q9UPN4 1083 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 CHMP2BQ9UQN3 213 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 SH3GLB1Q9Y371 365 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 SBNO1A3KN83 1393 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 KIAA0232Q92628 1395 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 HNRNPRO43390 633 aaKnown RBP10.33□□□□□ -0.76
PTPRA-204ENST00000380393 UBTFL1P0CB47 393 aaPredicted RBP10.33□□□□□ -0.76
PTPRA-204ENST00000380393 PLOD1Q02809 727 aaPredicted RBP10.33□□□□□ -0.76
PTPRA-204ENST00000380393 IMMTQ16891 758 aaKnown RBP10.33□□□□□ -0.76
PTPRA-204ENST00000380393 TSR1Q2NL82 804 aaKnown RBP10.33□□□□□ -0.76
PTPRA-204ENST00000380393 NBPF14Q5TI25 921 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 CCDC102BQ68D86 513 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 FAAH2Q6GMR7 532 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 EXOC3L1Q86VI1 746 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 LONP2Q86WA8 852 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 ANKRD24Q8TF21 1146 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 IP6K1Q92551 441 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 TRAPPC9Q96Q05 1148 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 STRN4Q9NRL3 753 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 ADGRG1Q9Y653 693 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 DCCP43146 1447 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 GMNCA6NCL1 334 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 PPIP5K2O43314 1243 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 KRT14P02533 472 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 KLC1Q07866 573 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 SNRNP27Q8WVK2 155 aaKnown RBP10.33□□□□□ -0.76
PTPRA-204ENST00000380393 ABHD8Q96I13 439 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.33□□□□□ -0.764e-6■■■■□ 23.7
PTPRA-204ENST00000380393 ABCF2Q9UG63 623 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 CROTQ9UKG9 612 aa10.33□□□□□ -0.76
PTPRA-204ENST00000380393 LTBP4Q8N2S1 1624 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 MARF1Q9Y4F3 1742 aaKnown RBP10.32□□□□□ -0.76
PTPRA-204ENST00000380393 GSTT1P30711 240 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 DMPKQ09013 629 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 QPCTQ16769 361 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 KCNH5Q8NCM2 988 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 AENQ8WTP8 325 aaKnown RBP10.32□□□□□ -0.76
PTPRA-204ENST00000380393 CCT6BQ92526 530 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 OSBPL10Q9BXB5 764 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.32□□□□□ -0.76
PTPRA-204ENST00000380393 KIAA1468Q9P260 1216 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 R3HDM2Q9Y2K5 976 aaKnown RBP10.32□□□□□ -0.76
PTPRA-204ENST00000380393 PXDNQ92626 1479 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 TMEM247A6NEH6 219 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 BACH1O14867 736 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 NSUN2Q08J23 767 aaKnown RBP eCLIP10.32□□□□□ -0.76
PTPRA-204ENST00000380393 MTHFSDQ2M296 383 aaKnown RBP10.32□□□□□ -0.76
PTPRA-204ENST00000380393 SLC44A4Q53GD3 710 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 TMEM53Q6P2H8 277 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 PRCCQ92733 491 aaPredicted RBP10.32□□□□□ -0.76
PTPRA-204ENST00000380393 CLMNQ96JQ2 1002 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 CAPZA3Q96KX2 299 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 LUC7LQ9NQ29 371 aaKnown RBP10.32□□□□□ -0.76
PTPRA-204ENST00000380393 PRDM11Q9NQV5 511 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 SOS2Q07890 1332 aaPredicted RBP10.32□□□□□ -0.76
PTPRA-204ENST00000380393 CDK12Q9NYV4 1490 aaPredicted RBP10.32□□□□□ -0.76
PTPRA-204ENST00000380393 SMARCA1P28370 1054 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 HPDP32754 393 aaPredicted RBP10.32□□□□□ -0.76
PTPRA-204ENST00000380393 CLPPQ16740 277 aaPredicted RBP10.32□□□□□ -0.76
PTPRA-204ENST00000380393 SH2D4BQ5SQS7 431 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 CCDC70Q6NSX1 233 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 KANK3Q6NY19 840 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 PTF1AQ7RTS3 328 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 LSG1Q9H089 658 aaKnown RBP10.32□□□□□ -0.76
PTPRA-204ENST00000380393 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.32□□□□□ -0.76
PTPRA-204ENST00000380393 ZNF180Q9UJW8 692 aa10.32□□□□□ -0.76
PTPRA-204ENST00000380393 MED1Q15648 1581 aaPredicted RBP10.31□□□□□ -0.76
PTPRA-204ENST00000380393 TIMM44O43615 452 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 ME1P48163 572 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 ATP8B2P98198 1209 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 GKAP1Q5VSY0 366 aaPredicted RBP10.31□□□□□ -0.76
PTPRA-204ENST00000380393 LINS1Q8NG48 757 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 BHMTQ93088 406 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 MMS19Q96T76 1030 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms