RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 DDX49Q9Y6V7 483 aaKnown RBP27.36■■□□□ 1.97
U2AF1-202ENST00000380276 RCSD1Q6JBY9 416 aa27.35■■□□□ 1.97
U2AF1-202ENST00000380276 CXCL17Q6UXB2 119 aa27.35■■□□□ 1.97
U2AF1-202ENST00000380276 NSMFQ6X4W1 530 aa27.35■■□□□ 1.97
U2AF1-202ENST00000380276 CCPG1Q9ULG6 757 aa27.35■■□□□ 1.97
U2AF1-202ENST00000380276 PRR12Q9ULL5 1215 aa27.35■■□□□ 1.97
U2AF1-202ENST00000380276 MUM1L1Q5H9M0 696 aa27.34■■□□□ 1.97
U2AF1-202ENST00000380276 TMEM240Q5SV17 173 aa27.34■■□□□ 1.97
U2AF1-202ENST00000380276 ZNF576Q9H609 170 aa27.34■■□□□ 1.97
U2AF1-202ENST00000380276 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.34■■□□□ 1.97
U2AF1-202ENST00000380276 CTAGE5O15320 804 aa27.33■■□□□ 1.97
U2AF1-202ENST00000380276 DYNC1LI2O43237 492 aaPredicted RBP27.33■■□□□ 1.97
U2AF1-202ENST00000380276 CYP2C18P33260 490 aa27.33■■□□□ 1.97
U2AF1-202ENST00000380276 FBXO16Q8IX29 292 aaPredicted RBP27.33■■□□□ 1.97
U2AF1-202ENST00000380276 GRXCR1A8MXD5 290 aa27.32■■□□□ 1.96
U2AF1-202ENST00000380276 ZEB2O60315 1214 aa27.32■■□□□ 1.96
U2AF1-202ENST00000380276 PTGS1P23219 599 aa27.32■■□□□ 1.96
U2AF1-202ENST00000380276 FSCN1Q16658 493 aaKnown RBP27.32■■□□□ 1.96
U2AF1-202ENST00000380276 PSRC1Q6PGN9 363 aaPredicted RBP27.32■■□□□ 1.96
U2AF1-202ENST00000380276 ZNF365Q70YC5 407 aa27.32■■□□□ 1.96
U2AF1-202ENST00000380276 IL17RBQ9NRM6 502 aa27.32■■□□□ 1.96
U2AF1-202ENST00000380276 ASTN1O14525 1302 aa27.32■■□□□ 1.96
U2AF1-202ENST00000380276 LRRC37A2A6NM11 1700 aa27.31■■□□□ 1.96
U2AF1-202ENST00000380276 PLA2G6O60733 806 aa27.31■■□□□ 1.96
U2AF1-202ENST00000380276 CABYRO75952 493 aa27.31■■□□□ 1.96
U2AF1-202ENST00000380276 PBX2P40425 430 aa27.31■■□□□ 1.96
U2AF1-202ENST00000380276 RRP12Q5JTH9 1297 aaKnown RBP27.31■■□□□ 1.96
U2AF1-202ENST00000380276 VPS53Q5VIR6 699 aa27.31■■□□□ 1.96
U2AF1-202ENST00000380276 C16orf59Q7L2K0 433 aa27.31■■□□□ 1.96
U2AF1-202ENST00000380276 PDGFCQ9NRA1 345 aa27.31■■□□□ 1.96
U2AF1-202ENST00000380276 CYP39A1Q9NYL5 469 aa27.31■■□□□ 1.96
U2AF1-202ENST00000380276 GNEQ9Y223 722 aaKnown RBP27.31■■□□□ 1.96
U2AF1-202ENST00000380276 SMPD1P17405 629 aa27.3■■□□□ 1.96
U2AF1-202ENST00000380276 ITGA7Q13683 1181 aa27.3■■□□□ 1.96
U2AF1-202ENST00000380276 ANKRD45Q5TZF3 282 aa27.3■■□□□ 1.96
U2AF1-202ENST00000380276 PPM1EQ8WY54 764 aa27.3■■□□□ 1.96
U2AF1-202ENST00000380276 GAS2L1Q99501 681 aaPredicted RBP27.3■■□□□ 1.96
U2AF1-202ENST00000380276 HIPK3Q9H422 1215 aa27.3■■□□□ 1.96
U2AF1-202ENST00000380276 CUL9Q8IWT3 2517 aa27.3■■□□□ 1.96
U2AF1-202ENST00000380276 FOXP2O15409 715 aa27.29■■□□□ 1.96
U2AF1-202ENST00000380276 SLC16A2P36021 539 aa27.29■■□□□ 1.96
U2AF1-202ENST00000380276 KIAA1211Q6ZU35 1233 aa27.29■■□□□ 1.96
U2AF1-202ENST00000380276 DCAF4Q8WV16 495 aa27.29■■□□□ 1.96
U2AF1-202ENST00000380276 PURBQ96QR8 312 aaKnown RBP27.29■■□□□ 1.96
U2AF1-202ENST00000380276 PBX4Q9BYU1 374 aa27.29■■□□□ 1.96
U2AF1-202ENST00000380276 MTIF3Q9H2K0 278 aaKnown RBP27.29■■□□□ 1.96
U2AF1-202ENST00000380276 EYSQ5T1H1 3165 aa27.28■■□□□ 1.96
U2AF1-202ENST00000380276 FRMPD2Q68DX3 1309 aaPredicted RBP27.28■■□□□ 1.96
U2AF1-202ENST00000380276 CD4P01730 458 aa27.28■■□□□ 1.96
U2AF1-202ENST00000380276 NKX3-2P78367 333 aa27.28■■□□□ 1.96
U2AF1-202ENST00000380276 IQSEC1Q6DN90 963 aa27.28■■□□□ 1.96
U2AF1-202ENST00000380276 TTBK2Q6IQ55 1244 aa27.28■■□□□ 1.96
U2AF1-202ENST00000380276 IL23AQ9NPF7 189 aa27.28■■□□□ 1.96
U2AF1-202ENST00000380276 ICAM1P05362 532 aa27.27■■□□□ 1.96
U2AF1-202ENST00000380276 CCL23P55773 120 aa27.27■■□□□ 1.96
U2AF1-202ENST00000380276 PSMC6P62333 389 aa27.27■■□□□ 1.96
U2AF1-202ENST00000380276 EVI5LQ96CN4 794 aa27.27■■□□□ 1.96
U2AF1-202ENST00000380276 GPCPD1Q9NPB8 672 aa27.27■■□□□ 1.96
U2AF1-202ENST00000380276 UMODL1Q5DID0 1318 aa27.26■■□□□ 1.95
U2AF1-202ENST00000380276 FGBP02675 491 aa27.26■■□□□ 1.95
U2AF1-202ENST00000380276 TMEM63BQ5T3F8 832 aa27.26■■□□□ 1.95
U2AF1-202ENST00000380276 SYDE2Q5VT97 1194 aa27.26■■□□□ 1.95
U2AF1-202ENST00000380276 TAPT1Q6NXT6 567 aa27.26■■□□□ 1.95
U2AF1-202ENST00000380276 USP38Q8NB14 1042 aa27.26■■□□□ 1.95
U2AF1-202ENST00000380276 PRDM12Q9H4Q4 367 aa27.26■■□□□ 1.95
U2AF1-202ENST00000380276 VTA1Q9NP79 307 aa27.26■■□□□ 1.95
U2AF1-202ENST00000380276 MSRAQ9UJ68 235 aa27.26■■□□□ 1.95
U2AF1-202ENST00000380276 ANAPC4Q9UJX5 808 aa27.26■■□□□ 1.95
U2AF1-202ENST00000380276 PTPDC1A2A3K4 754 aa27.25■■□□□ 1.95
U2AF1-202ENST00000380276 BAATQ14032 418 aaPredicted RBP27.25■■□□□ 1.95
U2AF1-202ENST00000380276 SLC43A3Q8NBI5 491 aa27.25■■□□□ 1.95
U2AF1-202ENST00000380276 SYMPKQ92797 1274 aaKnown RBP27.25■■□□□ 1.95
U2AF1-202ENST00000380276 TRPV6Q9H1D0 765 aa27.25■■□□□ 1.95
U2AF1-202ENST00000380276 RANBP17Q9H2T7 1088 aaKnown RBP27.25■■□□□ 1.95
U2AF1-202ENST00000380276 HELLSQ9NRZ9 838 aa27.25■■□□□ 1.95
U2AF1-202ENST00000380276 ADD3Q9UEY8 706 aaKnown RBP27.25■■□□□ 1.95
U2AF1-202ENST00000380276 CDH23Q9H251 3354 aa27.25■■□□□ 1.95
U2AF1-202ENST00000380276 ORC4O43929 436 aa27.24■■□□□ 1.95
U2AF1-202ENST00000380276 RAB30Q15771 203 aa27.24■■□□□ 1.95
U2AF1-202ENST00000380276 RASIP1Q5U651 963 aa27.24■■□□□ 1.95
U2AF1-202ENST00000380276 OTOP2Q7RTS6 562 aa27.24■■□□□ 1.95
U2AF1-202ENST00000380276 SALL3Q9BXA9 1300 aa27.23■■□□□ 1.95
U2AF1-202ENST00000380276 B4GALT4O60513 344 aa27.23■■□□□ 1.95
U2AF1-202ENST00000380276 TOP1P11387 765 aaKnown RBP27.23■■□□□ 1.95
U2AF1-202ENST00000380276 CALML3P27482 149 aa27.23■■□□□ 1.95
U2AF1-202ENST00000380276 ALDH5A1P51649 535 aaPredicted RBP27.23■■□□□ 1.95
U2AF1-202ENST00000380276 HERVK_113Q902F9 699 aa27.23■■□□□ 1.95
U2AF1-202ENST00000380276 FAM227BQ96M60 508 aa27.23■■□□□ 1.95
U2AF1-202ENST00000380276 TMEM47Q9BQJ4 181 aa27.23■■□□□ 1.95
U2AF1-202ENST00000380276 NKX2-4Q9H2Z4 354 aa27.23■■□□□ 1.95
U2AF1-202ENST00000380276 CXXC1Q9P0U4 656 aaPredicted RBP27.23■■□□□ 1.95
U2AF1-202ENST00000380276 Q9Y3F1 56 aa27.23■■□□□ 1.95
U2AF1-202ENST00000380276 GRIN2DO15399 1336 aa27.22■■□□□ 1.95
U2AF1-202ENST00000380276 LCTP09848 1927 aa27.22■■□□□ 1.95
U2AF1-202ENST00000380276 NFIBO00712 420 aa27.22■■□□□ 1.95
U2AF1-202ENST00000380276 MYL3P08590 195 aa27.21■■□□□ 1.95
U2AF1-202ENST00000380276 IGFBP4P22692 258 aa27.21■■□□□ 1.95
U2AF1-202ENST00000380276 HAND2P61296 217 aa27.21■■□□□ 1.95
U2AF1-202ENST00000380276 MCMDC2Q4G0Z9 681 aa27.21■■□□□ 1.95
U2AF1-202ENST00000380276 SLC30A10Q6XR72 485 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms