RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 NOLC1Q14978 699 aaKnown RBP eCLIP16.7■□□□□ 0.26
RAB3IP-203ENST00000378809 CDC37Q16543 378 aaPredicted RBP16.7■□□□□ 0.26
RAB3IP-203ENST00000378809 DNTTIP2Q5QJE6 756 aaKnown RBP16.7■□□□□ 0.26
RAB3IP-203ENST00000378809 GMCL1P1Q8NEA9 526 aa16.7■□□□□ 0.26
RAB3IP-203ENST00000378809 HSD3B7Q9H2F3 369 aa16.7■□□□□ 0.26
RAB3IP-203ENST00000378809 OFD1O75665 1012 aa16.7■□□□□ 0.26
RAB3IP-203ENST00000378809 TECP42680 631 aa16.7■□□□□ 0.26
RAB3IP-203ENST00000378809 CUL4BQ13620 913 aa16.7■□□□□ 0.26
RAB3IP-203ENST00000378809 CALCRLQ16602 461 aa16.7■□□□□ 0.26
RAB3IP-203ENST00000378809 CIAPIN1Q6FI81 312 aa16.7■□□□□ 0.26
RAB3IP-203ENST00000378809 SMYD4Q8IYR2 804 aaPredicted RBP16.7■□□□□ 0.26
RAB3IP-203ENST00000378809 SPICE1Q8N0Z3 855 aa16.7■□□□□ 0.26
RAB3IP-203ENST00000378809 MTMR8Q96EF0 704 aa16.7■□□□□ 0.26
RAB3IP-203ENST00000378809 TMEM39BQ9GZU3 492 aa16.7■□□□□ 0.26
RAB3IP-203ENST00000378809 NFE2L3Q9Y4A8 694 aa16.7■□□□□ 0.26
RAB3IP-203ENST00000378809 PCDHA1Q9Y5I3 950 aa16.7■□□□□ 0.26
RAB3IP-203ENST00000378809 TMEM232C9JQI7 657 aa16.69■□□□□ 0.26
RAB3IP-203ENST00000378809 CDK11BP21127 795 aaKnown RBP16.69■□□□□ 0.26
RAB3IP-203ENST00000378809 UBASH3AP57075 661 aa16.69■□□□□ 0.26
RAB3IP-203ENST00000378809 SNAP25P60880 206 aa16.69■□□□□ 0.26
RAB3IP-203ENST00000378809 TMC6Q7Z403 805 aa16.69■□□□□ 0.26
RAB3IP-203ENST00000378809 CACTINQ8WUQ7 758 aaKnown RBP16.69■□□□□ 0.26
RAB3IP-203ENST00000378809 CNTNAP1P78357 1384 aa16.69■□□□□ 0.26
RAB3IP-203ENST00000378809 GTPBP6O43824 516 aaPredicted RBP16.69■□□□□ 0.26
RAB3IP-203ENST00000378809 TDP2O95551 362 aa16.69■□□□□ 0.26
RAB3IP-203ENST00000378809 BMP3P12645 472 aa16.69■□□□□ 0.26
RAB3IP-203ENST00000378809 TXKP42681 527 aa16.69■□□□□ 0.26
RAB3IP-203ENST00000378809 ORC2Q13416 577 aaPredicted RBP16.69■□□□□ 0.26
RAB3IP-203ENST00000378809 ARID5BQ14865 1188 aa16.69■□□□□ 0.26
RAB3IP-203ENST00000378809 CABP7Q86V35 215 aa16.69■□□□□ 0.26
RAB3IP-203ENST00000378809 KIAA1524Q8TCG1 905 aa16.69■□□□□ 0.26
RAB3IP-203ENST00000378809 GMCL1Q96IK5 515 aa16.69■□□□□ 0.26
RAB3IP-203ENST00000378809 AK8Q96MA6 479 aa16.69■□□□□ 0.26
RAB3IP-203ENST00000378809 ARHGEF10LQ9HCE6 1279 aa16.69■□□□□ 0.26
RAB3IP-203ENST00000378809 CBFA2T2O43439 604 aa16.68■□□□□ 0.26
RAB3IP-203ENST00000378809 R3HDM1Q15032 1099 aaKnown RBP16.68■□□□□ 0.26
RAB3IP-203ENST00000378809 MIGA2Q7L4E1 593 aa16.68■□□□□ 0.26
RAB3IP-203ENST00000378809 CCDC125Q86Z20 511 aa16.68■□□□□ 0.26
RAB3IP-203ENST00000378809 CDAN1Q8IWY9 1227 aa16.68■□□□□ 0.26
RAB3IP-203ENST00000378809 ENOX1Q8TC92 643 aaKnown RBP16.68■□□□□ 0.26
RAB3IP-203ENST00000378809 MTRQ99707 1265 aa16.68■□□□□ 0.26
RAB3IP-203ENST00000378809 CCSER1Q9C0I3 900 aa16.68■□□□□ 0.26
RAB3IP-203ENST00000378809 BCS1LQ9Y276 419 aa16.68■□□□□ 0.26
RAB3IP-203ENST00000378809 A0A1W2PRG0 241 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 SLC37A4O43826 429 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 ECE1P42892 770 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 STX17P56962 302 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 NBPF9Q3BBW0 867 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 USH1GQ495M9 461 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 LRRC8AQ8IWT6 810 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 PSME4Q14997 1843 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 SYNRGQ9UMZ2 1314 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 USP17L15C9J2P7 530 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 USP17L13C9JLJ4 530 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 USP17L11C9JVI0 530 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 USP17L18D6R9N7 530 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 USP17L22D6RA61 530 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 USP17L17D6RBQ6 530 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 USP17L19D6RCP7 530 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 USP17L20D6RJB6 530 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 WNT10BO00744 389 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 CD44P16070 742 aaKnown RBP16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 ERCC5P28715 1186 aaPredicted RBP16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 CLK2P49760 499 aaKnown RBP16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 USP17L24Q0WX57 530 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 TMEM266Q2M3C6 531 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 SYDE2Q5VT97 1194 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 USP17L6PQ6QN14 398 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 MYOZ2Q9NPC6 264 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 RMND1Q9NWS8 449 aa16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 SCAF8Q9UPN6 1271 aaKnown RBP16.67■□□□□ 0.26
RAB3IP-203ENST00000378809 SHTN1A0MZ66 631 aa16.66■□□□□ 0.26
RAB3IP-203ENST00000378809 MARCH6O60337 910 aa16.66■□□□□ 0.26
RAB3IP-203ENST00000378809 RPN1P04843 607 aaKnown RBP16.66■□□□□ 0.26
RAB3IP-203ENST00000378809 PLCG1P19174 1290 aa16.66■□□□□ 0.26
RAB3IP-203ENST00000378809 GSDMDP57764 484 aa16.66■□□□□ 0.26
RAB3IP-203ENST00000378809 NAALADL2Q58DX5 795 aa16.66■□□□□ 0.26
RAB3IP-203ENST00000378809 MTMR14Q8NCE2 650 aa16.66■□□□□ 0.26
RAB3IP-203ENST00000378809 DPF2Q92785 391 aa16.66■□□□□ 0.26
RAB3IP-203ENST00000378809 AMNQ9BXJ7 453 aa16.66■□□□□ 0.26
RAB3IP-203ENST00000378809 GLT8D2Q9H1C3 349 aa16.66■□□□□ 0.26
RAB3IP-203ENST00000378809 IMPACTQ9P2X3 320 aa16.66■□□□□ 0.26
RAB3IP-203ENST00000378809 ZBTB21Q9ULJ3 1066 aa16.66■□□□□ 0.26
RAB3IP-203ENST00000378809 KIF13BQ9NQT8 1826 aa16.65■□□□□ 0.26
RAB3IP-203ENST00000378809 NFKBIEO00221 500 aa16.65■□□□□ 0.26
RAB3IP-203ENST00000378809 TNIP1Q15025 636 aa16.65■□□□□ 0.26
RAB3IP-203ENST00000378809 FKBP1CQ5VVH2 108 aa16.65■□□□□ 0.26
RAB3IP-203ENST00000378809 ACER1Q8TDN7 264 aa16.65■□□□□ 0.26
RAB3IP-203ENST00000378809 SAMSN1Q9NSI8 373 aaKnown RBP16.65■□□□□ 0.26
RAB3IP-203ENST00000378809 DDX25Q9UHL0 483 aaKnown RBP16.65■□□□□ 0.26
RAB3IP-203ENST00000378809 ZYXQ15942 572 aaKnown RBP16.65■□□□□ 0.26
RAB3IP-203ENST00000378809 TPD52L1Q16890 204 aaPredicted RBP16.65■□□□□ 0.26
RAB3IP-203ENST00000378809 FAM83AQ86UY5 434 aa16.65■□□□□ 0.26
RAB3IP-203ENST00000378809 FBXO11Q86XK2 927 aa16.65■□□□□ 0.26
RAB3IP-203ENST00000378809 CALML4Q96GE6 196 aa16.65■□□□□ 0.26
RAB3IP-203ENST00000378809 MTMR9Q96QG7 549 aa16.65■□□□□ 0.26
RAB3IP-203ENST00000378809 RAB34Q9BZG1 259 aa16.65■□□□□ 0.26
RAB3IP-203ENST00000378809 GOPCQ9HD26 462 aa16.65■□□□□ 0.26
RAB3IP-203ENST00000378809 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.65■□□□□ 0.26
RAB3IP-203ENST00000378809 LRWD1Q9UFC0 647 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms