RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 CTNND1O60716 968 aaKnown RBP19.71■□□□□ 0.75
THUMPD2-201ENST00000378727 PRR29P0C7W0 189 aa19.71■□□□□ 0.75
THUMPD2-201ENST00000378727 TAL1P17542 331 aaPredicted RBP19.71■□□□□ 0.75
THUMPD2-201ENST00000378727 PRPHP41219 470 aa19.71■□□□□ 0.75
THUMPD2-201ENST00000378727 NLRP12P59046 1061 aa19.71■□□□□ 0.75
THUMPD2-201ENST00000378727 POSTNQ15063 836 aa19.71■□□□□ 0.75
THUMPD2-201ENST00000378727 PRAMEF18Q5VWM3 479 aa19.71■□□□□ 0.75
THUMPD2-201ENST00000378727 DTHD1Q6ZMT9 781 aa19.71■□□□□ 0.75
THUMPD2-201ENST00000378727 APOBEC3FQ8IUX4 373 aaKnown RBP19.71■□□□□ 0.75
THUMPD2-201ENST00000378727 GRAMD1CQ8IYS0 662 aa19.71■□□□□ 0.75
THUMPD2-201ENST00000378727 ZNF341Q9BYN7 854 aa19.71■□□□□ 0.75
THUMPD2-201ENST00000378727 PCDHA5Q9Y5H7 936 aa19.71■□□□□ 0.75
THUMPD2-201ENST00000378727 USP17L15C9J2P7 530 aa19.7■□□□□ 0.74
THUMPD2-201ENST00000378727 USP17L13C9JLJ4 530 aa19.7■□□□□ 0.74
THUMPD2-201ENST00000378727 USP17L11C9JVI0 530 aa19.7■□□□□ 0.74
THUMPD2-201ENST00000378727 USP17L18D6R9N7 530 aa19.7■□□□□ 0.74
THUMPD2-201ENST00000378727 USP17L22D6RA61 530 aa19.7■□□□□ 0.74
THUMPD2-201ENST00000378727 USP17L17D6RBQ6 530 aa19.7■□□□□ 0.74
THUMPD2-201ENST00000378727 USP17L19D6RCP7 530 aa19.7■□□□□ 0.74
THUMPD2-201ENST00000378727 USP17L20D6RJB6 530 aa19.7■□□□□ 0.74
THUMPD2-201ENST00000378727 USP17L24Q0WX57 530 aa19.7■□□□□ 0.74
THUMPD2-201ENST00000378727 ORC2Q13416 577 aaPredicted RBP19.7■□□□□ 0.74
THUMPD2-201ENST00000378727 USP17L6PQ6QN14 398 aa19.7■□□□□ 0.74
THUMPD2-201ENST00000378727 GGA3Q9NZ52 723 aa19.7■□□□□ 0.74
THUMPD2-201ENST00000378727 DDNO94850 711 aaPredicted RBP19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 OR52Z1P0C646 297 aa19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 SLFN14P0C7P3 912 aa19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 CDC25AP30304 524 aa19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 INPP5BP32019 993 aa19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 E2F4Q16254 413 aa19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 USH1GQ495M9 461 aa19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 CEP57L1Q8IYX8 460 aa19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 GLT8D2Q9H1C3 349 aa19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 SRCAPQ6ZRS2 3230 aa19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 DOCK1Q14185 1865 aa19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 MEIS2O14770 477 aa19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 TDP2O95551 362 aa19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 ADCY5O95622 1261 aa19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 ISM2Q6H9L7 571 aa19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 POTEDQ86YR6 584 aa19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 DHX40Q8IX18 779 aaKnown RBP19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 RNF181Q9P0P0 153 aa19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 HOOK1Q9UJC3 728 aaKnown RBP19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 POLR2AP24928 1970 aaKnown RBP19.69■□□□□ 0.74
THUMPD2-201ENST00000378727 OPLAHO14841 1288 aa19.68■□□□□ 0.74
THUMPD2-201ENST00000378727 PLA2G6O60733 806 aa19.68■□□□□ 0.74
THUMPD2-201ENST00000378727 ZRSR1Q15695 479 aaKnown RBP19.68■□□□□ 0.74
THUMPD2-201ENST00000378727 KANK3Q6NY19 840 aa19.68■□□□□ 0.74
THUMPD2-201ENST00000378727 SH3RF1Q7Z6J0 888 aa19.68■□□□□ 0.74
THUMPD2-201ENST00000378727 GINM1Q9NU53 330 aa19.68■□□□□ 0.74
THUMPD2-201ENST00000378727 PP2D1A8MPX8 630 aa19.67■□□□□ 0.74
THUMPD2-201ENST00000378727 SLC37A4O43826 429 aa19.67■□□□□ 0.74
THUMPD2-201ENST00000378727 SARSP49591 514 aaKnown RBP19.67■□□□□ 0.74
THUMPD2-201ENST00000378727 NT5DC1Q5TFE4 455 aa19.67■□□□□ 0.74
THUMPD2-201ENST00000378727 DCAF15Q66K64 600 aa19.67■□□□□ 0.74
THUMPD2-201ENST00000378727 CHURC1Q8WUH1 139 aa19.67■□□□□ 0.74
THUMPD2-201ENST00000378727 MTMR9Q96QG7 549 aa19.67■□□□□ 0.74
THUMPD2-201ENST00000378727 P2RX7Q99572 595 aaKnown RBP19.67■□□□□ 0.74
THUMPD2-201ENST00000378727 FEZ1Q99689 392 aa19.67■□□□□ 0.74
THUMPD2-201ENST00000378727 ZNF112Q9UJU3 913 aa19.67■□□□□ 0.74
THUMPD2-201ENST00000378727 PAGE5Q96GU1 130 aa19.67■□□□□ 0.74
THUMPD2-201ENST00000378727 RANBP17Q9H2T7 1088 aaKnown RBP19.67■□□□□ 0.74
THUMPD2-201ENST00000378727 FBXO28Q9NVF7 368 aa19.67■□□□□ 0.74
THUMPD2-201ENST00000378727 FZD1Q9UP38 647 aa19.67■□□□□ 0.74
THUMPD2-201ENST00000378727 BMP6P22004 513 aa19.66■□□□□ 0.74
THUMPD2-201ENST00000378727 PLCB2Q00722 1185 aa19.66■□□□□ 0.74
THUMPD2-201ENST00000378727 PDXDC2PQ6P474 469 aa19.66■□□□□ 0.74
THUMPD2-201ENST00000378727 SPATA20Q8TB22 786 aa19.66■□□□□ 0.74
THUMPD2-201ENST00000378727 KIFC2Q96AC6 838 aa19.66■□□□□ 0.74
THUMPD2-201ENST00000378727 BPIFA3Q9BQP9 254 aa19.66■□□□□ 0.74
THUMPD2-201ENST00000378727 NAT10Q9H0A0 1025 aaKnown RBP19.66■□□□□ 0.74
THUMPD2-201ENST00000378727 KIAA1683Q9H0B3 1180 aa19.66■□□□□ 0.74
THUMPD2-201ENST00000378727 FEM1BQ9UK73 627 aa19.66■□□□□ 0.74
THUMPD2-201ENST00000378727 SSC5DA1L4H1 1573 aa19.66■□□□□ 0.74
THUMPD2-201ENST00000378727 PPP4R3AQ6IN85 833 aa19.66■□□□□ 0.74
THUMPD2-201ENST00000378727 FAM160B2Q86V87 743 aa19.66■□□□□ 0.74
THUMPD2-201ENST00000378727 IQUBQ8NA54 791 aa19.66■□□□□ 0.74
THUMPD2-201ENST00000378727 MAN1B1Q9UKM7 699 aa19.66■□□□□ 0.74
THUMPD2-201ENST00000378727 AFMP43652 599 aa19.65■□□□□ 0.74
THUMPD2-201ENST00000378727 DGKZQ13574 1117 aa19.65■□□□□ 0.74
THUMPD2-201ENST00000378727 KARSQ15046 597 aaKnown RBP19.65■□□□□ 0.74
THUMPD2-201ENST00000378727 AOPEPQ8N6M6 819 aa19.65■□□□□ 0.74
THUMPD2-201ENST00000378727 ANO3Q9BYT9 981 aa19.65■□□□□ 0.74
THUMPD2-201ENST00000378727 CCSER1Q9C0I3 900 aa19.65■□□□□ 0.74
THUMPD2-201ENST00000378727 AP3B2Q13367 1082 aa19.64■□□□□ 0.74
THUMPD2-201ENST00000378727 CALCRLQ16602 461 aa19.64■□□□□ 0.74
THUMPD2-201ENST00000378727 CCDC174Q6PII3 467 aa19.64■□□□□ 0.74
THUMPD2-201ENST00000378727 SCYL3Q8IZE3 742 aa19.64■□□□□ 0.74
THUMPD2-201ENST00000378727 ZKSCAN4Q969J2 545 aaPredicted RBP19.64■□□□□ 0.74
THUMPD2-201ENST00000378727 TRIM44Q96DX7 344 aaPredicted RBP19.64■□□□□ 0.74
THUMPD2-201ENST00000378727 HOOK2Q96ED9 719 aa19.64■□□□□ 0.74
THUMPD2-201ENST00000378727 PYM1Q9BRP8 204 aaKnown RBP19.64■□□□□ 0.74
THUMPD2-201ENST00000378727 CASP1P29466 404 aa19.64■□□□□ 0.73
THUMPD2-201ENST00000378727 TXLNAP40222 546 aa19.64■□□□□ 0.73
THUMPD2-201ENST00000378727 C9orf131Q5VYM1 1079 aa19.64■□□□□ 0.73
THUMPD2-201ENST00000378727 CRYGNQ8WXF5 182 aa19.64■□□□□ 0.73
THUMPD2-201ENST00000378727 LPAR1Q92633 364 aa19.64■□□□□ 0.73
THUMPD2-201ENST00000378727 SMARCE1Q969G3 411 aa19.64■□□□□ 0.73
THUMPD2-201ENST00000378727 AK8Q96MA6 479 aa19.64■□□□□ 0.73
THUMPD2-201ENST00000378727 WRNIP1Q96S55 665 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms