RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ALX1Q15699 326 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 HERC4Q5GLZ8 1057 aaPredicted RBP9.66□□□□□ -0.86
PCDH9-202ENST00000377865 STMN2Q93045 179 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 WDR24Q96S15 920 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 IL25Q9H293 177 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 VCXQ9H320 206 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 HOMER2Q9NSB8 354 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 BAIAP2L1Q9UHR4 511 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 hCG_1984214I3L0E3 225 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 CIB2O75838 187 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 BCRP11274 1271 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 RASSF7Q02833 373 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 SEPT2Q15019 361 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 CCDC38Q502W7 563 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 SPATA31D1Q6ZQQ2 1576 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 STOX1Q6ZVD7 989 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 RASGRP2Q7LDG7 609 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 PNMA8AQ86V59 439 aaPredicted RBP9.65□□□□□ -0.86
PCDH9-202ENST00000377865 ZNF713Q8N859 430 aaPredicted RBP9.65□□□□□ -0.86
PCDH9-202ENST00000377865 CABLES1Q8TDN4 633 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 SREK1Q8WXA9 508 aaKnown RBP9.65□□□□□ -0.86
PCDH9-202ENST00000377865 IFT172Q9UG01 1749 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 A0A1W2PQC6 194 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 MOCS3O95396 460 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 PHKA1P46020 1223 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 SARNPP82979 210 aaKnown RBP9.65□□□□□ -0.86
PCDH9-202ENST00000377865 TFAP4Q01664 338 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 PSMD2Q13200 908 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 ORAI2Q96SN7 254 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 EPB41L5Q9HCM4 733 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 SLIT1O75093 1534 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 SERPING1P05155 500 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 PCK1P35558 622 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 NR5A1Q13285 461 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 INF2Q27J81 1249 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 RABL6Q3YEC7 729 aaPredicted RBP9.65□□□□□ -0.86
PCDH9-202ENST00000377865 EPHA10Q5JZY3 1008 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 METTL16Q86W50 562 aaKnown RBP9.65□□□□□ -0.86
PCDH9-202ENST00000377865 AIFM3Q96NN9 605 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 VEZTQ9HBM0 779 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 METTL14Q9HCE5 456 aaKnown RBP9.65□□□□□ -0.86
PCDH9-202ENST00000377865 PANK4Q9NVE7 773 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 ZSWIM5Q9P217 1185 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 DNM3Q9UQ16 869 aa9.65□□□□□ -0.86
PCDH9-202ENST00000377865 GRID2IPA4D2P6 1211 aa9.65□□□□□ -0.87
PCDH9-202ENST00000377865 PRR29P0C7W0 189 aa9.65□□□□□ -0.87
PCDH9-202ENST00000377865 GGCXP38435 758 aa9.65□□□□□ -0.87
PCDH9-202ENST00000377865 EIF3BP55884 814 aaKnown RBP9.65□□□□□ -0.87
PCDH9-202ENST00000377865 ARHGAP24Q8N264 748 aa9.65□□□□□ -0.87
PCDH9-202ENST00000377865 ST7Q9NRC1 585 aa9.65□□□□□ -0.87
PCDH9-202ENST00000377865 ATP8A2Q9NTI2 1148 aa9.65□□□□□ -0.87
PCDH9-202ENST00000377865 CEP83Q9Y592 693 aa9.65□□□□□ -0.87
PCDH9-202ENST00000377865 CLGNO14967 610 aa9.65□□□□□ -0.87
PCDH9-202ENST00000377865 AP5Z1O43299 807 aa9.65□□□□□ -0.87
PCDH9-202ENST00000377865 POLR2FP61218 127 aaKnown RBP9.65□□□□□ -0.87
PCDH9-202ENST00000377865 IFT88Q13099 833 aa9.65□□□□□ -0.87
PCDH9-202ENST00000377865 TEX11Q8IYF3 940 aa9.65□□□□□ -0.87
PCDH9-202ENST00000377865 GRK7Q8WTQ7 553 aa9.65□□□□□ -0.87
PCDH9-202ENST00000377865 TRIM31Q9BZY9 425 aa9.65□□□□□ -0.87
PCDH9-202ENST00000377865 LY9Q9HBG7 655 aa9.65□□□□□ -0.87
PCDH9-202ENST00000377865 CTTNBP2NLQ9P2B4 639 aa9.65□□□□□ -0.87
PCDH9-202ENST00000377865 LIMA1Q9UHB6 759 aaKnown RBP9.65□□□□□ -0.87
PCDH9-202ENST00000377865 SAMM50Q9Y512 469 aa9.65□□□□□ -0.87
PCDH9-202ENST00000377865 FAM169AQ9Y6X4 670 aa9.65□□□□□ -0.87
PCDH9-202ENST00000377865 C6orf229H3BNL8 230 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 XRCC5P13010 732 aaKnown RBP9.64□□□□□ -0.87
PCDH9-202ENST00000377865 KIF11P52732 1056 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 MXRA7P84157 204 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 FAM47AQ5JRC9 791 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 SGMS1Q86VZ5 419 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 TBC1D10CQ8IV04 446 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 DNAJC10Q8IXB1 793 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 PPP1R14CQ8TAE6 165 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 DPF2Q92785 391 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 FHOD1Q9Y613 1164 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 OVOS2A0A0G2JMS6 1433 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 TECP42680 631 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 TPTE2Q6XPS3 522 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 CDCA7Q9BWT1 371 aaPredicted RBP9.64□□□□□ -0.87
PCDH9-202ENST00000377865 GREM2Q9H772 168 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 FEZ2Q9UHY8 353 aaPredicted RBP9.64□□□□□ -0.87
PCDH9-202ENST00000377865 PGRMC1O00264 195 aaKnown RBP9.64□□□□□ -0.87
PCDH9-202ENST00000377865 STAT1P42224 750 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 KCTD16Q68DU8 428 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 CYB5R4Q7L1T6 521 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 RNF10Q8N5U6 811 aaKnown RBP9.64□□□□□ -0.87
PCDH9-202ENST00000377865 COG1Q8WTW3 980 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 U2AF1L4Q8WU68 220 aaKnown RBP9.64□□□□□ -0.87
PCDH9-202ENST00000377865 BICD1Q96G01 975 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 DISC1Q9NRI5 854 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 CCDC87Q9NVE4 849 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.64□□□□□ -0.87
PCDH9-202ENST00000377865 NEDD4P46934 1319 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 UBN2Q6ZU65 1347 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 ZMYND10O75800 440 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 EEF2P13639 858 aaKnown RBP9.64□□□□□ -0.87
PCDH9-202ENST00000377865 TTC19Q6DKK2 380 aaPredicted RBP9.64□□□□□ -0.87
PCDH9-202ENST00000377865 AEBP2Q6ZN18 517 aaPredicted RBP9.64□□□□□ -0.87
PCDH9-202ENST00000377865 PNMA1Q8ND90 353 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 VTI1AQ96AJ9 217 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms