RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 ZHX1Q9UKY1 873 aaPredicted RBP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 ABCA5Q8WWZ7 1642 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 F8W8V4 182 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 KANSL2Q9H9L4 492 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 ZNF277Q9NRM2 450 aaPredicted RBP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 PCDHA5Q9Y5H7 936 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 IDEP14735 1019 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 PTGS1P23219 599 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 RDM1Q8NG50 284 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 IQCGQ9H095 443 aaKnown RBP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 MMRN2Q9H8L6 949 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 USP14P54578 494 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 CEBPZQ03701 1054 aaKnown RBP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 PPP2R5CQ13362 524 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 VCPIP1Q96JH7 1222 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 STOML1Q9UBI4 398 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 ZMYM2Q9UBW7 1377 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 KRT40Q6A162 431 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 ADCY2Q08462 1091 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 CUL4BQ13620 913 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 NSUN7Q8NE18 718 aaKnown RBP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 MAGI3Q5TCQ9 1506 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 LGALS16A8MUM7 142 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 KRT16P08779 473 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 A0A1W2PRG0 241 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 IGBP1P78318 339 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 NLGN1Q8N2Q7 840 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 PSMC2P35998 433 aaKnown RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 BTNL9Q6UXG8 535 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 PPP1R13BQ96KQ4 1090 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 XPO4Q9C0E2 1151 aaKnown RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 TMEM94Q12767 1356 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 PDXKO00764 312 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 MPRIPQ6WCQ1 1025 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 FAM163AQ96GL9 167 aaPredicted RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 PNMA6AP0CW24 399 aaPredicted RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 MAN2A1Q16706 1144 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 XAGE2Q96GT9 111 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 HNRNPRO43390 633 aaKnown RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 C8orf74Q6P047 294 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 CDC37L1Q7L3B6 337 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 IFNL3Q8IZI9 196 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 PRPF38AQ8NAV1 312 aaKnown RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 NOP2P46087 812 aaKnown RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 TUBGCP2Q9BSJ2 902 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 MAK16Q9BXY0 300 aaKnown RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 INTS8Q75QN2 995 aaKnown RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 ERGIC2Q96RQ1 377 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 EPS15L1Q9UBC2 864 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 NR1I2O75469 434 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 DCTN3O75935 186 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 GSTA1P08263 222 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 MAPK8IP2Q13387 824 aaPredicted RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 CCDC6Q16204 474 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 ANKS1AQ92625 1134 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 GTF2H1P32780 548 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 GOLGA8TH3BQL2 631 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 GOLGA8HP0CJ92 632 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 HNRNPH3P31942 346 aaKnown RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 DNAJC3Q13217 504 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 MMGT1Q8N4V1 131 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 MYL6P60660 151 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 LRWD1Q9UFC0 647 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 AARSP49588 968 aaKnown RBP eCLIP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 MSL1Q68DK7 614 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 PEX26Q7Z412 305 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 EPC1Q9H2F5 836 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 AMFRQ9UKV5 643 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 SLC4A4Q9Y6R1 1079 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 IRS4O14654 1257 aaPredicted RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 MAPTP10636 758 aaKnown RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 CYP7A1P22680 504 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 SLFN12LQ6IEE8 588 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 HOMER2Q9NSB8 354 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 TTI1O43156 1089 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 TROVE2P10155 538 aaKnown RBP eCLIP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 NEK8Q86SG6 692 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 PITPNM2Q9BZ72 1349 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 F6X3S4 739 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 PGRMC1O00264 195 aaKnown RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 SLC16A3O15427 465 aaKnown RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 STIP1P31948 543 aaKnown RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 PSMD7P51665 324 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 CAPRIN2Q6IMN6 1127 aaKnown RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 KCNV1Q6PIU1 500 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 MICALL1Q8N3F8 863 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 TXLNGQ9NUQ3 528 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 TRAF5O00463 557 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 ZNF135P52742 658 aaPredicted RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 LCA5Q86VQ0 697 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 RAB21Q9UL25 225 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 PNMA6EA0A0J9YXQ4 647 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 A0A1B0GTH6 734 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 BIRC2Q13490 618 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 ANKRD20A3Q5VUR7 823 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 TSNARE1Q96NA8 513 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 GOLGA8IPA6NC78 632 aa5.41□□□□□ -1.54
PCDH9-201ENST00000377861 POU5F1Q01860 360 aaKnown RBP5.41□□□□□ -1.54
PCDH9-201ENST00000377861 PSTPIP2Q9H939 334 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms