RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 HNRNPLLQ8WVV9 542 aaKnown RBP13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 C8orf37Q96NL8 207 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 DUSP9Q99956 384 aaKnown RBP13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 TRIM9Q9C026 710 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 RIOX1Q9H6W3 641 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 RAB21Q9UL25 225 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 REXO2Q9Y3B8 237 aaKnown RBP13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 EPN1Q9Y6I3 576 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 hCG_1984214I3L0E3 225 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 SASH3O75995 380 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 SEC31AO94979 1220 aaKnown RBP13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 NDUFA10O95299 355 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 SRGNP10124 158 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 ADRA2BP18089 450 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 PLCG1P19174 1290 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 MEA1Q16626 185 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 NEK8Q86SG6 692 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 SLC35F6Q8N357 371 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 ZNF713Q8N859 430 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 RETREG2Q8NC44 543 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 MSANTD4Q8NCY6 345 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 RASSF8Q8NHQ8 419 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 RRP36Q96EU6 259 aaKnown RBP13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 CHP1Q99653 195 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 TTYH3Q9C0H2 523 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 ARFGAP3Q9NP61 516 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 ST7Q9NRC1 585 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 PODXL2Q9NZ53 605 aa13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 ZHX1Q9UKY1 873 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF9-201ENST00000377507 TOM1O60784 492 aa13.18□□□□□ -0.3
TNFRSF9-201ENST00000377507 CCNE1P24864 410 aa13.18□□□□□ -0.3
TNFRSF9-201ENST00000377507 AMPD2Q01433 879 aa13.18□□□□□ -0.3
TNFRSF9-201ENST00000377507 WDR59Q6PJI9 974 aa13.18□□□□□ -0.3
TNFRSF9-201ENST00000377507 USP17L2Q6R6M4 530 aa13.18□□□□□ -0.3
TNFRSF9-201ENST00000377507 TEX11Q8IYF3 940 aa13.18□□□□□ -0.3
TNFRSF9-201ENST00000377507 CEP95Q96GE4 821 aa13.18□□□□□ -0.3
TNFRSF9-201ENST00000377507 GPR101Q96P66 508 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF9-201ENST00000377507 NAPGQ99747 312 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF9-201ENST00000377507 MMTAG2Q9BU76 263 aaKnown RBP13.18□□□□□ -0.3
TNFRSF9-201ENST00000377507 FUT8Q9BYC5 575 aa13.18□□□□□ -0.3
TNFRSF9-201ENST00000377507 LUC7L2Q9Y383 392 aaKnown RBP13.18□□□□□ -0.3
TNFRSF9-201ENST00000377507 PLIN4Q96Q06 1357 aa13.18□□□□□ -0.3
TNFRSF9-201ENST00000377507 BICDL2A1A5D9 508 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 CCNT1O60563 726 aaKnown RBP13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 WHAMMP3Q1A5X7 153 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 KIF4BQ2VIQ3 1234 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 LETM2Q2VYF4 491 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 FAM196AQ6ZSG2 479 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 ZSCAN29Q8IWY8 852 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 SLF2Q8IX21 1173 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 TBC1D22AQ8WUA7 517 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 P2RX5Q93086 422 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 TRIM47Q96LD4 638 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 MTMR9Q96QG7 549 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 SLF1Q9BQI6 1058 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 NUP58Q9BVL2 599 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 CPVLQ9H3G5 476 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 ANKZF1Q9H8Y5 726 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 RASSF10A6NK89 507 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 BBOX1O75936 387 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 UFL1O94874 794 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 AMPD3Q01432 767 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 STK4Q13043 487 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 ZNF771Q7L3S4 317 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 CSGALNACT2Q8N6G5 542 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 RPGRQ92834 1020 aaKnown RBP13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 CCDC47Q96A33 483 aaKnown RBP13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 PLIN2Q99541 437 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 TUBGCP2Q9BSJ2 902 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 HAUS4Q9H6D7 363 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 MAGEC2Q9UBF1 373 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 SEC63Q9UGP8 760 aaKnown RBP13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 GGA1Q9UJY5 639 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 MYH8P13535 1937 aa13.17□□□□□ -0.3
TNFRSF9-201ENST00000377507 PSMD14O00487 310 aa13.16□□□□□ -0.3
TNFRSF9-201ENST00000377507 MAP2K7O14733 419 aa13.16□□□□□ -0.3
TNFRSF9-201ENST00000377507 SNHG28P0DPA3 235 aa13.16□□□□□ -0.3
TNFRSF9-201ENST00000377507 HOXA10P31260 410 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF9-201ENST00000377507 FXR2P51116 673 aaKnown RBP eCLIP13.16□□□□□ -0.3
TNFRSF9-201ENST00000377507 PIP4K2BP78356 416 aa13.16□□□□□ -0.3
TNFRSF9-201ENST00000377507 PDE4DQ08499 809 aa13.16□□□□□ -0.3
TNFRSF9-201ENST00000377507 FIGNQ5HY92 759 aa13.16□□□□□ -0.3
TNFRSF9-201ENST00000377507 SOGA3Q5TF21 947 aa13.16□□□□□ -0.3
TNFRSF9-201ENST00000377507 ANKRD40Q6AI12 368 aa13.16□□□□□ -0.3
TNFRSF9-201ENST00000377507 FAM114A1Q8IWE2 563 aa13.16□□□□□ -0.3
TNFRSF9-201ENST00000377507 REXO1Q8N1G1 1221 aaKnown RBP13.16□□□□□ -0.3
TNFRSF9-201ENST00000377507 MSL3Q8N5Y2 521 aaKnown RBP13.16□□□□□ -0.3
TNFRSF9-201ENST00000377507 TBCKQ8TEA7 893 aa13.16□□□□□ -0.3
TNFRSF9-201ENST00000377507 PIGSQ96S52 555 aa13.16□□□□□ -0.3
TNFRSF9-201ENST00000377507 EXOC1Q9NV70 894 aa13.16□□□□□ -0.3
TNFRSF9-201ENST00000377507 MTMR7Q9Y216 660 aa13.16□□□□□ -0.3
TNFRSF9-201ENST00000377507 IGKV6D-41A0A0C4DH26 115 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 EDIL3O43854 480 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 PDHBP11177 359 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 HOXA7P31268 230 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 TECP42680 631 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 CDK17Q00537 523 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 GABPAQ06546 454 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 MFSD14BQ5SR56 506 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms