RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 PARP1P09874 1014 aaKnown RBP15.48■□□□□ 0.07
SF1-205ENST00000377394 C12orf60Q5U649 245 aa15.48■□□□□ 0.07
SF1-205ENST00000377394 PNMA1Q8ND90 353 aa15.48■□□□□ 0.07
SF1-205ENST00000377394 NAPGQ99747 312 aaPredicted RBP15.48■□□□□ 0.07
SF1-205ENST00000377394 MYO1AQ9UBC5 1043 aa15.48■□□□□ 0.07
SF1-205ENST00000377394 MAD2L2Q9UI95 211 aa15.48■□□□□ 0.07
SF1-205ENST00000377394 PCDHA6Q9UN73 950 aa15.48■□□□□ 0.07
SF1-205ENST00000377394 JAG2Q9Y219 1238 aa15.48■□□□□ 0.07
SF1-205ENST00000377394 PCDHA8Q9Y5H6 950 aa15.48■□□□□ 0.07
SF1-205ENST00000377394 IRS2Q9Y4H2 1338 aa15.47■□□□□ 0.07
SF1-205ENST00000377394 CTAGE15A4D2H0 777 aa15.47■□□□□ 0.07
SF1-205ENST00000377394 CTAGE8P0CG41 777 aa15.47■□□□□ 0.07
SF1-205ENST00000377394 GRM4Q14833 912 aa15.47■□□□□ 0.07
SF1-205ENST00000377394 CTAGE6Q86UF2 777 aa15.47■□□□□ 0.07
SF1-205ENST00000377394 CTAGE4Q8IX94 777 aa15.47■□□□□ 0.07
SF1-205ENST00000377394 ZNF507Q8TCN5 953 aa15.47■□□□□ 0.07
SF1-205ENST00000377394 ANKRD2Q9GZV1 360 aa15.47■□□□□ 0.07
SF1-205ENST00000377394 MAST2Q6P0Q8 1798 aa15.47■□□□□ 0.07
SF1-205ENST00000377394 ZMYND10O75800 440 aa15.47■□□□□ 0.07
SF1-205ENST00000377394 KCNB1Q14721 858 aa15.47■□□□□ 0.07
SF1-205ENST00000377394 TMED8Q6PL24 325 aaPredicted RBP15.47■□□□□ 0.07
SF1-205ENST00000377394 DTHD1Q6ZMT9 781 aa15.47■□□□□ 0.07
SF1-205ENST00000377394 MB21D1Q8N884 522 aa15.47■□□□□ 0.07
SF1-205ENST00000377394 LRRC15Q8TF66 581 aa15.47■□□□□ 0.07
SF1-205ENST00000377394 TTC26A0AVF1 554 aa15.46■□□□□ 0.07
SF1-205ENST00000377394 KCNQ4P56696 695 aa15.46■□□□□ 0.07
SF1-205ENST00000377394 AMPD2Q01433 879 aa15.46■□□□□ 0.07
SF1-205ENST00000377394 DAGLBQ8NCG7 672 aa15.46■□□□□ 0.07
SF1-205ENST00000377394 DYNLL2Q96FJ2 89 aa15.46■□□□□ 0.07
SF1-205ENST00000377394 EPN1Q9Y6I3 576 aaPredicted RBP15.46■□□□□ 0.07
SF1-205ENST00000377394 SPATA31A5Q5VU36 1347 aa15.46■□□□□ 0.07
SF1-205ENST00000377394 SPATA31A7Q8IWB4 1347 aa15.46■□□□□ 0.07
SF1-205ENST00000377394 AHDC1Q5TGY3 1603 aaPredicted RBP15.46■□□□□ 0.07
SF1-205ENST00000377394 LGALS16A8MUM7 142 aa15.46■□□□□ 0.07
SF1-205ENST00000377394 CYTH3O43739 400 aa15.46■□□□□ 0.07
SF1-205ENST00000377394 WHAMMP3Q1A5X7 153 aa15.46■□□□□ 0.07
SF1-205ENST00000377394 GSPT2Q8IYD1 628 aaKnown RBP15.46■□□□□ 0.07
SF1-205ENST00000377394 KBTBD4Q9NVX7 518 aa15.46■□□□□ 0.07
SF1-205ENST00000377394 CCDC194A0A1B0GVG4 234 aa15.46■□□□□ 0.06
SF1-205ENST00000377394 A0A1W2PQC6 194 aa15.46■□□□□ 0.06
SF1-205ENST00000377394 NDUFA10O95299 355 aa15.46■□□□□ 0.06
SF1-205ENST00000377394 TUBB4BP68371 445 aa15.46■□□□□ 0.06
SF1-205ENST00000377394 TTC19Q6DKK2 380 aaPredicted RBP15.46■□□□□ 0.06
SF1-205ENST00000377394 NLRP3Q96P20 1036 aa15.46■□□□□ 0.06
SF1-205ENST00000377394 DNAJC7Q99615 494 aa15.46■□□□□ 0.06
SF1-205ENST00000377394 CCSER1Q9C0I3 900 aa15.46■□□□□ 0.06
SF1-205ENST00000377394 GBP3Q9H0R5 595 aa15.46■□□□□ 0.06
SF1-205ENST00000377394 HPCAL4Q9UM19 191 aa15.46■□□□□ 0.06
SF1-205ENST00000377394 ZC3H4Q9UPT8 1303 aaKnown RBP15.45■□□□□ 0.06
SF1-205ENST00000377394 USP17L3A6NCW0 530 aa15.45■□□□□ 0.06
SF1-205ENST00000377394 USP17L4A6NCW7 530 aa15.45■□□□□ 0.06
SF1-205ENST00000377394 RGL2O15211 777 aa15.45■□□□□ 0.06
SF1-205ENST00000377394 RHOBTB3O94955 611 aa15.45■□□□□ 0.06
SF1-205ENST00000377394 EEF1GP26641 437 aaKnown RBP15.45■□□□□ 0.06
SF1-205ENST00000377394 GGCXP38435 758 aa15.45■□□□□ 0.06
SF1-205ENST00000377394 INF2Q27J81 1249 aa15.45■□□□□ 0.06
SF1-205ENST00000377394 USP17L1Q7RTZ2 530 aa15.45■□□□□ 0.06
SF1-205ENST00000377394 GIMAP8Q8ND71 665 aaPredicted RBP15.45■□□□□ 0.06
SF1-205ENST00000377394 ACBD3Q9H3P7 528 aa15.45■□□□□ 0.06
SF1-205ENST00000377394 THAP9Q9H5L6 903 aa15.45■□□□□ 0.06
SF1-205ENST00000377394 STXBP3O00186 592 aa15.45■□□□□ 0.06
SF1-205ENST00000377394 DZIP1Q86YF9 867 aaKnown RBP15.45■□□□□ 0.06
SF1-205ENST00000377394 OR8K1Q8NGG5 319 aa15.45■□□□□ 0.06
SF1-205ENST00000377394 HINFPQ9BQA5 517 aa15.45■□□□□ 0.06
SF1-205ENST00000377394 JPH2Q9BR39 696 aaPredicted RBP15.45■□□□□ 0.06
SF1-205ENST00000377394 SAMM50Q9Y512 469 aa15.45■□□□□ 0.06
SF1-205ENST00000377394 MYL1P05976 194 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 AARSP49588 968 aaKnown RBP eCLIP15.44■□□□□ 0.06
SF1-205ENST00000377394 NT5C2P49902 561 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 GNAQP50148 359 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 IRAK1P51617 712 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 TTI2Q6NXR4 508 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 WDR59Q6PJI9 974 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 BARHL2Q9NY43 387 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 TRIM10Q9UDY6 481 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 CAPN11Q9UMQ6 739 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 ROBO3Q96MS0 1386 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 ZNF831Q5JPB2 1677 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 EBAG9O00559 213 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 TM4SF1P30408 202 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 UBA7P41226 1012 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 PIP4K2BP78356 416 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 GALNT17Q6IS24 598 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 CCDC24Q8N4L8 307 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 SH3RF3Q8TEJ3 882 aaPredicted RBP15.44■□□□□ 0.06
SF1-205ENST00000377394 PLIN2Q99541 437 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 NYXQ9GZU5 481 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 TCP11L1Q9NUJ3 509 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 CCDC88AQ3V6T2 1871 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 CNTNAP4Q9C0A0 1308 aa15.44■□□□□ 0.06
SF1-205ENST00000377394 SPTY2D1Q68D10 685 aaPredicted RBP15.43■□□□□ 0.06
SF1-205ENST00000377394 BARGINQ6ZT62 677 aa15.43■□□□□ 0.06
SF1-205ENST00000377394 HEATR3Q7Z4Q2 680 aa15.43■□□□□ 0.06
SF1-205ENST00000377394 CCDC148Q8NFR7 591 aa15.43■□□□□ 0.06
SF1-205ENST00000377394 ZNF622Q969S3 477 aaKnown RBP eCLIP15.43■□□□□ 0.067e-8■■□□□ 12
SF1-205ENST00000377394 SRP68Q9UHB9 627 aaKnown RBP15.43■□□□□ 0.06
SF1-205ENST00000377394 MYO6Q9UM54 1294 aa15.43■□□□□ 0.06
SF1-205ENST00000377394 LUC7L2Q9Y383 392 aaKnown RBP15.43■□□□□ 0.06
SF1-205ENST00000377394 PALM3A6NDB9 673 aaPredicted RBP15.43■□□□□ 0.06
SF1-205ENST00000377394 MYO1FO00160 1098 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms