RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 TAF1P21675 1872 aa17.27■□□□□ 0.35
FXN-201ENST00000377270 GUCY1A2P33402 732 aa17.27■□□□□ 0.35
FXN-201ENST00000377270 IRAK1P51617 712 aa17.27■□□□□ 0.35
FXN-201ENST00000377270 CDR1P51861 262 aa17.27■□□□□ 0.35
FXN-201ENST00000377270 PHC3Q8NDX5 983 aa17.27■□□□□ 0.35
FXN-201ENST00000377270 WASF1Q92558 559 aa17.27■□□□□ 0.35
FXN-201ENST00000377270 SCLT1Q96NL6 688 aa17.27■□□□□ 0.35
FXN-201ENST00000377270 C8orf37Q96NL8 207 aa17.27■□□□□ 0.35
FXN-201ENST00000377270 PNKPQ96T60 521 aa17.27■□□□□ 0.35
FXN-201ENST00000377270 EHD4Q9H223 541 aa17.27■□□□□ 0.35
FXN-201ENST00000377270 STK36Q9NRP7 1315 aa17.27■□□□□ 0.35
FXN-201ENST00000377270 CMTR1Q8N1G2 835 aaKnown RBP17.26■□□□□ 0.35
FXN-201ENST00000377270 UBAC1Q9BSL1 405 aa17.26■□□□□ 0.35
FXN-201ENST00000377270 SMIM22K7EJ46 135 aa17.26■□□□□ 0.35
FXN-201ENST00000377270 ATP6V1G1O75348 118 aa17.26■□□□□ 0.35
FXN-201ENST00000377270 COL5A3P25940 1745 aaPredicted RBP17.26■□□□□ 0.35
FXN-201ENST00000377270 PAPOLAP51003 745 aaKnown RBP17.26■□□□□ 0.35
FXN-201ENST00000377270 DYNLL1P63167 89 aaKnown RBP17.26■□□□□ 0.35
FXN-201ENST00000377270 PTPAQ15257 358 aa17.26■□□□□ 0.35
FXN-201ENST00000377270 SLC10A5Q5PT55 438 aa17.26■□□□□ 0.35
FXN-201ENST00000377270 ACBD5Q5T8D3 534 aaPredicted RBP17.26■□□□□ 0.35
FXN-201ENST00000377270 TRIM22Q8IYM9 498 aa17.26■□□□□ 0.35
FXN-201ENST00000377270 ZCWPW1Q9H0M4 648 aa17.26■□□□□ 0.35
FXN-201ENST00000377270 SRP68Q9UHB9 627 aaKnown RBP17.26■□□□□ 0.35
FXN-201ENST00000377270 ATXN2Q99700 1313 aaKnown RBP17.26■□□□□ 0.35
FXN-201ENST00000377270 TIAM2Q8IVF5 1701 aa17.25■□□□□ 0.35
FXN-201ENST00000377270 STX10O60499 249 aa17.25■□□□□ 0.35
FXN-201ENST00000377270 PPP6R2O75170 966 aa17.25■□□□□ 0.35
FXN-201ENST00000377270 PRPF6O94906 941 aaKnown RBP17.25■□□□□ 0.35
FXN-201ENST00000377270 TUBB4BP68371 445 aa17.25■□□□□ 0.35
FXN-201ENST00000377270 TOGARAM2Q6ZUX3 1019 aa17.25■□□□□ 0.35
FXN-201ENST00000377270 CCDC24Q8N4L8 307 aa17.25■□□□□ 0.35
FXN-201ENST00000377270 MAP3K14Q99558 947 aa17.25■□□□□ 0.35
FXN-201ENST00000377270 RIOK1Q9BRS2 568 aaKnown RBP17.25■□□□□ 0.35
FXN-201ENST00000377270 SLC40A1Q9NP59 571 aa17.25■□□□□ 0.35
FXN-201ENST00000377270 MROH7-TTC4A0A0A0MT08 1334 aa17.25■□□□□ 0.35
FXN-201ENST00000377270 CNTNAP4Q9C0A0 1308 aa17.25■□□□□ 0.35
FXN-201ENST00000377270 BCORQ6W2J9 1755 aa17.25■□□□□ 0.35
FXN-201ENST00000377270 TOM1O60784 492 aa17.25■□□□□ 0.35
FXN-201ENST00000377270 KCNV2Q8TDN2 545 aa17.25■□□□□ 0.35
FXN-201ENST00000377270 C17orf50Q8WW18 174 aa17.25■□□□□ 0.35
FXN-201ENST00000377270 ESR2Q92731 530 aa17.25■□□□□ 0.35
FXN-201ENST00000377270 SETDB2Q96T68 719 aa17.25■□□□□ 0.35
FXN-201ENST00000377270 TRIM4Q9C037 500 aa17.25■□□□□ 0.35
FXN-201ENST00000377270 KCNJ14Q9UNX9 436 aa17.25■□□□□ 0.35
FXN-201ENST00000377270 COL1A1P02452 1464 aaPredicted RBP17.25■□□□□ 0.35
FXN-201ENST00000377270 BTBD18B2RXH4 712 aa17.24■□□□□ 0.35
FXN-201ENST00000377270 MEFVO15553 781 aaPredicted RBP17.24■□□□□ 0.35
FXN-201ENST00000377270 SYKP43405 635 aa17.24■□□□□ 0.35
FXN-201ENST00000377270 RPS8P62241 208 aaKnown RBP17.24■□□□□ 0.35
FXN-201ENST00000377270 TMEM62Q0P6H9 643 aa17.24■□□□□ 0.35
FXN-201ENST00000377270 PARP9Q8IXQ6 854 aa17.24■□□□□ 0.35
FXN-201ENST00000377270 ZNF654Q8IZM8 581 aa17.24■□□□□ 0.35
FXN-201ENST00000377270 IGSF22Q8N9C0 903 aa17.24■□□□□ 0.35
FXN-201ENST00000377270 FANCBQ8NB91 859 aa17.24■□□□□ 0.35
FXN-201ENST00000377270 NLRP3Q96P20 1036 aa17.24■□□□□ 0.35
FXN-201ENST00000377270 OSBPL9Q96SU4 736 aa17.24■□□□□ 0.35
FXN-201ENST00000377270 MTA3Q9BTC8 594 aa17.24■□□□□ 0.35
FXN-201ENST00000377270 GBP3Q9H0R5 595 aa17.24■□□□□ 0.35
FXN-201ENST00000377270 SYF2O95926 243 aaKnown RBP17.24■□□□□ 0.35
FXN-201ENST00000377270 ZNF24P17028 368 aa17.24■□□□□ 0.35
FXN-201ENST00000377270 SAFBQ15424 915 aaKnown RBP eCLIP17.24■□□□□ 0.35
FXN-201ENST00000377270 SHC4Q6S5L8 630 aa17.24■□□□□ 0.35
FXN-201ENST00000377270 BZW1Q7L1Q6 419 aaKnown RBP17.24■□□□□ 0.35
FXN-201ENST00000377270 EXOC8Q8IYI6 725 aa17.24■□□□□ 0.35
FXN-201ENST00000377270 CRACR2BQ8N4Y2 399 aaPredicted RBP17.24■□□□□ 0.35
FXN-201ENST00000377270 MAGEC3Q8TD91 643 aa17.24■□□□□ 0.35
FXN-201ENST00000377270 NARFQ9UHQ1 456 aa17.24■□□□□ 0.35
FXN-201ENST00000377270 PUF60Q9UHX1 559 aaKnown RBP17.24■□□□□ 0.35
FXN-201ENST00000377270 CYP2D7A0A087X1C5 515 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 LRRIQ3A6PVS8 624 aaPredicted RBP17.23■□□□□ 0.35
FXN-201ENST00000377270 TMEM232C9JQI7 657 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 SMNDC1O75940 238 aaKnown RBP eCLIP17.23■□□□□ 0.35
FXN-201ENST00000377270 KLRK1P26718 216 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 LRRC23Q53EV4 343 aaPredicted RBP17.23■□□□□ 0.35
FXN-201ENST00000377270 SFMBT2Q5VUG0 894 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 NOSTRINQ8IVI9 506 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 NYXQ9GZU5 481 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 VCPKMTQ9H867 229 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 NID2Q14112 1375 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 ZPR1O75312 459 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 RPS6KA4O75676 772 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 RNF8O76064 485 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 KIF4AO95239 1232 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 MMP1P03956 469 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 SSBP05455 408 aaKnown RBP eCLIP17.23■□□□□ 0.35
FXN-201ENST00000377270 ARHGAP25P42331 645 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 VPS72Q15906 364 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 DIS3L2Q8IYB7 885 aaKnown RBP17.23■□□□□ 0.35
FXN-201ENST00000377270 ZNF384Q8TF68 577 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 RBM41Q96IZ5 413 aaKnown RBP17.23■□□□□ 0.35
FXN-201ENST00000377270 ALS2CR12Q96Q35 445 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 MTRQ99707 1265 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 MAPK8IP1Q9UQF2 711 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 TNKSO95271 1327 aa17.23■□□□□ 0.35
FXN-201ENST00000377270 GNPATO15228 680 aa17.22■□□□□ 0.35
FXN-201ENST00000377270 ROR2Q01974 943 aaKnown RBP17.22■□□□□ 0.35
FXN-201ENST00000377270 MYL5Q02045 173 aa17.22■□□□□ 0.35
FXN-201ENST00000377270 ACCSLQ4AC99 568 aa17.22■□□□□ 0.35
FXN-201ENST00000377270 ARMC9Q7Z3E5 817 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms