RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 GPATCH4Q5T3I0 446 aaKnown RBP22.78■■□□□ 1.24
VSX1-202ENST00000376709 CCDC17Q96LX7 622 aa22.78■■□□□ 1.24
VSX1-202ENST00000376709 DHX36Q9H2U1 1008 aaKnown RBP22.78■■□□□ 1.24
VSX1-202ENST00000376709 CUEDC2Q9H467 287 aa22.78■■□□□ 1.24
VSX1-202ENST00000376709 JMJD4Q9H9V9 463 aa22.78■■□□□ 1.24
VSX1-202ENST00000376709 KBTBD4Q9NVX7 518 aa22.78■■□□□ 1.24
VSX1-202ENST00000376709 GREB1LQ9C091 1923 aaPredicted RBP22.78■■□□□ 1.24
VSX1-202ENST00000376709 PLCG1P19174 1290 aa22.77■■□□□ 1.24
VSX1-202ENST00000376709 PRCPP42785 496 aa22.77■■□□□ 1.24
VSX1-202ENST00000376709 POTEDQ86YR6 584 aa22.77■■□□□ 1.24
VSX1-202ENST00000376709 TMEM139Q8IV31 216 aa22.77■■□□□ 1.24
VSX1-202ENST00000376709 ZSCAN29Q8IWY8 852 aaPredicted RBP22.77■■□□□ 1.24
VSX1-202ENST00000376709 FCHSD1Q86WN1 690 aa22.77■■□□□ 1.24
VSX1-202ENST00000376709 MRIQ9BWK5 157 aa22.77■■□□□ 1.24
VSX1-202ENST00000376709 TRIM34Q9BYJ4 488 aa22.77■■□□□ 1.24
VSX1-202ENST00000376709 MAGEF1Q9HAY2 307 aa22.77■■□□□ 1.24
VSX1-202ENST00000376709 PPIP5K2O43314 1243 aa22.76■■□□□ 1.23
VSX1-202ENST00000376709 RAD21O60216 631 aa22.76■■□□□ 1.23
VSX1-202ENST00000376709 STX10O60499 249 aa22.76■■□□□ 1.23
VSX1-202ENST00000376709 KCNB1Q14721 858 aa22.76■■□□□ 1.23
VSX1-202ENST00000376709 TTBK2Q6IQ55 1244 aa22.76■■□□□ 1.23
VSX1-202ENST00000376709 PPP1R18Q6NYC8 613 aa22.76■■□□□ 1.23
VSX1-202ENST00000376709 KCTD1Q719H9 257 aa22.76■■□□□ 1.23
VSX1-202ENST00000376709 IGSF22Q8N9C0 903 aa22.76■■□□□ 1.23
VSX1-202ENST00000376709 ANKRD20A12PQ8NF67 263 aa22.76■■□□□ 1.23
VSX1-202ENST00000376709 SLC16A2P36021 539 aa22.76■■□□□ 1.23
VSX1-202ENST00000376709 CCT6AP40227 531 aaKnown RBP22.76■■□□□ 1.23
VSX1-202ENST00000376709 BAG6P46379 1132 aa22.76■■□□□ 1.23
VSX1-202ENST00000376709 SF3B2Q13435 895 aaKnown RBP22.76■■□□□ 1.23
VSX1-202ENST00000376709 CALCRLQ16602 461 aa22.76■■□□□ 1.23
VSX1-202ENST00000376709 KMT5BQ4FZB7 885 aa22.76■■□□□ 1.23
VSX1-202ENST00000376709 PPFIBP1Q86W92 1011 aa22.76■■□□□ 1.23
VSX1-202ENST00000376709 DNAJC18Q9H819 358 aa22.76■■□□□ 1.23
VSX1-202ENST00000376709 FAM196BA6NMK8 535 aa22.75■■□□□ 1.23
VSX1-202ENST00000376709 YDJCA8MPS7 323 aa22.75■■□□□ 1.23
VSX1-202ENST00000376709 AKR1B15C9JRZ8 316 aaPredicted RBP22.75■■□□□ 1.23
VSX1-202ENST00000376709 ZSCAN12O43309 604 aa22.75■■□□□ 1.23
VSX1-202ENST00000376709 TUBB4AP04350 444 aa22.75■■□□□ 1.23
VSX1-202ENST00000376709 TXKP42681 527 aa22.75■■□□□ 1.23
VSX1-202ENST00000376709 HDLBPQ00341 1268 aaKnown RBP22.75■■□□□ 1.23
VSX1-202ENST00000376709 SPAG1Q07617 926 aa22.75■■□□□ 1.23
VSX1-202ENST00000376709 SYT10Q6XYQ8 523 aa22.75■■□□□ 1.23
VSX1-202ENST00000376709 CREBRFQ8IUR6 639 aa22.75■■□□□ 1.23
VSX1-202ENST00000376709 PI4KBQ9UBF8 816 aa22.75■■□□□ 1.23
VSX1-202ENST00000376709 FAM198AQ9UFP1 575 aa22.75■■□□□ 1.23
VSX1-202ENST00000376709 STIM1Q13586 685 aa22.74■■□□□ 1.23
VSX1-202ENST00000376709 KRT31Q15323 416 aa22.74■■□□□ 1.23
VSX1-202ENST00000376709 CC2D2BQ6DHV5 1058 aa22.74■■□□□ 1.23
VSX1-202ENST00000376709 SUPT20HQ8NEM7 779 aa22.74■■□□□ 1.23
VSX1-202ENST00000376709 RIC8AQ9NPQ8 531 aa22.74■■□□□ 1.23
VSX1-202ENST00000376709 DDTLA6NHG4 134 aaPredicted RBP22.74■■□□□ 1.23
VSX1-202ENST00000376709 TNNI2P48788 182 aa22.74■■□□□ 1.23
VSX1-202ENST00000376709 CERKLQ49MI3 558 aaPredicted RBP22.74■■□□□ 1.23
VSX1-202ENST00000376709 ADSSL1Q8N142 457 aa22.74■■□□□ 1.23
VSX1-202ENST00000376709 LRRC15Q8TF66 581 aa22.74■■□□□ 1.23
VSX1-202ENST00000376709 CALML4Q96GE6 196 aa22.74■■□□□ 1.23
VSX1-202ENST00000376709 IDI2Q9BXS1 227 aa22.74■■□□□ 1.23
VSX1-202ENST00000376709 SERPINA10Q9UK55 444 aa22.74■■□□□ 1.23
VSX1-202ENST00000376709 SIPA1L1O43166 1804 aa22.73■■□□□ 1.23
VSX1-202ENST00000376709 N4BP3O15049 544 aa22.73■■□□□ 1.23
VSX1-202ENST00000376709 ZBTB5O15062 677 aa22.73■■□□□ 1.23
VSX1-202ENST00000376709 KLRC4O43908 158 aa22.73■■□□□ 1.23
VSX1-202ENST00000376709 PPP1R11O60927 126 aaPredicted RBP22.73■■□□□ 1.23
VSX1-202ENST00000376709 CUL5Q93034 780 aa22.73■■□□□ 1.23
VSX1-202ENST00000376709 LIMA1Q9UHB6 759 aaKnown RBP22.73■■□□□ 1.23
VSX1-202ENST00000376709 KCNJ18B7U540 433 aa22.73■■□□□ 1.23
VSX1-202ENST00000376709 USP17L10C9JJH3 530 aa22.73■■□□□ 1.23
VSX1-202ENST00000376709 RHOBTB3O94955 611 aa22.73■■□□□ 1.23
VSX1-202ENST00000376709 PBX1P40424 430 aa22.73■■□□□ 1.23
VSX1-202ENST00000376709 NCBP1Q09161 790 aaKnown RBP22.73■■□□□ 1.23
VSX1-202ENST00000376709 SEMA3FQ13275 785 aa22.73■■□□□ 1.23
VSX1-202ENST00000376709 KCNJ12Q14500 433 aa22.73■■□□□ 1.23
VSX1-202ENST00000376709 TMEM266Q2M3C6 531 aa22.73■■□□□ 1.23
VSX1-202ENST00000376709 TCP11X2Q5H9J9 407 aa22.73■■□□□ 1.23
VSX1-202ENST00000376709 ANKRD7Q92527 254 aa22.73■■□□□ 1.23
VSX1-202ENST00000376709 CCDC47Q96A33 483 aaKnown RBP22.73■■□□□ 1.23
VSX1-202ENST00000376709 PPP2R2CQ9Y2T4 447 aa22.73■■□□□ 1.23
VSX1-202ENST00000376709 TDP2O95551 362 aa22.72■■□□□ 1.23
VSX1-202ENST00000376709 UBE2SQ16763 222 aa22.72■■□□□ 1.23
VSX1-202ENST00000376709 SH3BP5LQ7L8J4 393 aa22.72■■□□□ 1.23
VSX1-202ENST00000376709 TTLL6Q8N841 843 aa22.72■■□□□ 1.23
VSX1-202ENST00000376709 CPLX3Q8WVH0 158 aa22.72■■□□□ 1.23
VSX1-202ENST00000376709 MTMR9Q96QG7 549 aa22.72■■□□□ 1.23
VSX1-202ENST00000376709 PANX2Q96RD6 677 aa22.72■■□□□ 1.23
VSX1-202ENST00000376709 H7C1D1 291 aa22.72■■□□□ 1.23
VSX1-202ENST00000376709 PSMA7O14818 248 aa22.72■■□□□ 1.23
VSX1-202ENST00000376709 SLC37A4O43826 429 aa22.72■■□□□ 1.23
VSX1-202ENST00000376709 EEF2P13639 858 aaKnown RBP22.72■■□□□ 1.23
VSX1-202ENST00000376709 MRPL12P52815 198 aaKnown RBP22.72■■□□□ 1.23
VSX1-202ENST00000376709 RBL2Q08999 1139 aa22.72■■□□□ 1.23
VSX1-202ENST00000376709 GIMAP8Q8ND71 665 aaPredicted RBP22.72■■□□□ 1.23
VSX1-202ENST00000376709 TRIM9Q9C026 710 aa22.72■■□□□ 1.23
VSX1-202ENST00000376709 VPS16Q9H269 839 aa22.72■■□□□ 1.23
VSX1-202ENST00000376709 KANSL2Q9H9L4 492 aa22.72■■□□□ 1.23
VSX1-202ENST00000376709 LRWD1Q9UFC0 647 aa22.72■■□□□ 1.23
VSX1-202ENST00000376709 TRIM49BA6NDI0 452 aa22.71■■□□□ 1.23
VSX1-202ENST00000376709 LRRC10BA6NIK2 292 aa22.71■■□□□ 1.23
VSX1-202ENST00000376709 SLC1A4P43007 532 aa22.71■■□□□ 1.23
VSX1-202ENST00000376709 ETF1P62495 437 aaKnown RBP22.71■■□□□ 1.23
VSX1-202ENST00000376709 AMPD3Q01432 767 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms