RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 CARSP49589 748 aaKnown RBP12.64□□□□□ -0.39
VPS13A-205ENST00000376636 NOP9Q86U38 636 aaKnown RBP12.64□□□□□ -0.39
VPS13A-205ENST00000376636 MYLK4Q86YV6 388 aaPredicted RBP12.64□□□□□ -0.39
VPS13A-205ENST00000376636 ZNF212Q9UDV6 495 aa12.64□□□□□ -0.39
VPS13A-205ENST00000376636 CCDC78A2IDD5 438 aa12.64□□□□□ -0.39
VPS13A-205ENST00000376636 IPO5O00410 1097 aaKnown RBP12.64□□□□□ -0.39
VPS13A-205ENST00000376636 EIF3BP55884 814 aaKnown RBP12.64□□□□□ -0.39
VPS13A-205ENST00000376636 MIGA1Q8NAN2 632 aa12.64□□□□□ -0.39
VPS13A-205ENST00000376636 MCUQ8NE86 351 aa12.64□□□□□ -0.39
VPS13A-205ENST00000376636 DHX38Q92620 1227 aaKnown RBP12.64□□□□□ -0.39
VPS13A-205ENST00000376636 TMCC1O94876 653 aa12.64□□□□□ -0.39
VPS13A-205ENST00000376636 SLC12A1Q13621 1099 aa12.64□□□□□ -0.39
VPS13A-205ENST00000376636 IRAK4Q9NWZ3 460 aa12.64□□□□□ -0.39
VPS13A-205ENST00000376636 PRR23D1E9PI22 279 aaPredicted RBP12.64□□□□□ -0.39
VPS13A-205ENST00000376636 CTNND1O60716 968 aaKnown RBP12.64□□□□□ -0.39
VPS13A-205ENST00000376636 PRR23D2P0DMB1 279 aaPredicted RBP12.64□□□□□ -0.39
VPS13A-205ENST00000376636 PMS1P54277 932 aaKnown RBP12.64□□□□□ -0.39
VPS13A-205ENST00000376636 OCRLQ01968 901 aa12.64□□□□□ -0.39
VPS13A-205ENST00000376636 FAM81BQ96LP2 452 aa12.64□□□□□ -0.39
VPS13A-205ENST00000376636 SUN2Q9UH99 717 aa12.64□□□□□ -0.39
VPS13A-205ENST00000376636 POC1B-GALNT4F8VUJ3 575 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 RXRAP19793 462 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 TLK1Q9UKI8 766 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 RNF217Q8TC41 542 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 ITM2BQ9Y287 266 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 GSNP06396 782 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 NFKBIAP25963 317 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 GUCY2DQ02846 1103 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 UBN1Q9NPG3 1134 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 TBC1D7Q9P0N9 293 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 SOS2Q07890 1332 aaPredicted RBP12.63□□□□□ -0.39
VPS13A-205ENST00000376636 GUCY2CP25092 1073 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 BPIFB4P59827 614 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 CACTINQ8WUQ7 758 aaKnown RBP12.63□□□□□ -0.39
VPS13A-205ENST00000376636 OTUB1Q96FW1 271 aaPredicted RBP12.63□□□□□ -0.39
VPS13A-205ENST00000376636 STX18Q9P2W9 335 aaKnown RBP12.63□□□□□ -0.39
VPS13A-205ENST00000376636 PAIP2BQ9ULR5 123 aaKnown RBP12.63□□□□□ -0.39
VPS13A-205ENST00000376636 MED21Q13503 144 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 DTNBP1Q96EV8 351 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 SLC5A4Q9NY91 659 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 E2F6O75461 281 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 MYH10P35580 1976 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 ATP8B2P98198 1209 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 GJC2Q5T442 439 aaPredicted RBP12.63□□□□□ -0.39
VPS13A-205ENST00000376636 ACBD5Q5T8D3 534 aaPredicted RBP12.63□□□□□ -0.39
VPS13A-205ENST00000376636 ALS2CLQ60I27 953 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 SLFN12Q8IYM2 578 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 GPCPD1Q9NPB8 672 aa12.63□□□□□ -0.39
VPS13A-205ENST00000376636 IGHDP01880 384 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 KSR2Q6VAB6 950 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 NUDCD1Q96RS6 583 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 FBXW4P57775 412 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 ARHGAP18Q8N392 663 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 CUL7Q14999 1698 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 ABCD1P33897 745 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 ANGPTL8Q6UXH0 198 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 CAPN12Q6ZSI9 719 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 PLEKHM3Q6ZWE6 761 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 MAML1Q92585 1016 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 MORC3Q14149 939 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 AOC3Q16853 763 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 TPTE2Q6XPS3 522 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 AFAP1Q8N556 730 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 FAM96AQ9H5X1 160 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 ZNF233A6NK53 670 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 ESRRAP11474 423 aaPredicted RBP12.62□□□□□ -0.39
VPS13A-205ENST00000376636 TRPC1P48995 793 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 ARMCX3Q9UH62 379 aaPredicted RBP12.62□□□□□ -0.39
VPS13A-205ENST00000376636 IQSEC3Q9UPP2 1182 aaPredicted RBP12.62□□□□□ -0.39
VPS13A-205ENST00000376636 KAZNQ674X7 775 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 EPAS1Q99814 870 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 HNRNPCP07910 306 aaKnown RBP eCLIP12.62□□□□□ -0.39
VPS13A-205ENST00000376636 KCTD16Q68DU8 428 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 NCLNQ969V3 563 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 ADPGKQ9BRR6 497 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 ZNF263O14978 683 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 ADKP55263 362 aaKnown RBP12.62□□□□□ -0.39
VPS13A-205ENST00000376636 ZBTB8OSQ8IWT0 167 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 MMS19Q96T76 1030 aa12.62□□□□□ -0.39
VPS13A-205ENST00000376636 TADA3O75528 432 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 SLC1A4P43007 532 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 GNL1P36915 607 aaPredicted RBP12.61□□□□□ -0.39
VPS13A-205ENST00000376636 PIK3CAP42336 1068 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 C10orf76Q5T2E6 689 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 DEPTORQ8TB45 409 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 ZBTB18Q99592 522 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 PPP2R2CQ9Y2T4 447 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 KRT75O95678 551 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 NCF2P19878 526 aaPredicted RBP12.61□□□□□ -0.39
VPS13A-205ENST00000376636 PCGF5Q86SE9 256 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 LIG4P49917 911 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 ANO3Q9BYT9 981 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 METTL14Q9HCE5 456 aaKnown RBP12.61□□□□□ -0.39
VPS13A-205ENST00000376636 STRIP2Q9ULQ0 834 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 MYCLP12524 364 aaPredicted RBP12.61□□□□□ -0.39
VPS13A-205ENST00000376636 AP2B1P63010 937 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 E2F5Q15329 346 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 NGLY1Q96IV0 654 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 MEIS3Q99687 375 aa12.61□□□□□ -0.39
VPS13A-205ENST00000376636 CCDC85BQ15834 202 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms