RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 CABYRO75952 493 aa21.79■■□□□ 1.08
HDAC6-202ENST00000376610 FGAP02671 866 aa21.79■■□□□ 1.08
HDAC6-202ENST00000376610 FGRP09769 529 aa21.79■■□□□ 1.08
HDAC6-202ENST00000376610 CDK7P50613 346 aa21.79■■□□□ 1.08
HDAC6-202ENST00000376610 EPHB4P54760 987 aa21.79■■□□□ 1.08
HDAC6-202ENST00000376610 IRX5P78411 483 aaPredicted RBP21.79■■□□□ 1.08
HDAC6-202ENST00000376610 PPIGQ13427 754 aaKnown RBP eCLIP21.79■■□□□ 1.081e-7■■■□□ 17.6
HDAC6-202ENST00000376610 AAMPQ13685 434 aa21.79■■□□□ 1.08
HDAC6-202ENST00000376610 MFSD5Q6N075 450 aa21.79■■□□□ 1.08
HDAC6-202ENST00000376610 TLK2Q86UE8 772 aa21.79■■□□□ 1.08
HDAC6-202ENST00000376610 FAM227BQ96M60 508 aa21.79■■□□□ 1.08
HDAC6-202ENST00000376610 CYP39A1Q9NYL5 469 aa21.79■■□□□ 1.08
HDAC6-202ENST00000376610 ADD3Q9UEY8 706 aaKnown RBP21.79■■□□□ 1.08
HDAC6-202ENST00000376610 ZMYM6O95789 1325 aa21.79■■□□□ 1.08
HDAC6-202ENST00000376610 A0A0D9SFI3 127 aa21.78■■□□□ 1.08
HDAC6-202ENST00000376610 NOVP48745 357 aa21.78■■□□□ 1.08
HDAC6-202ENST00000376610 MFAP1P55081 439 aaKnown RBP21.78■■□□□ 1.08
HDAC6-202ENST00000376610 BEX3Q00994 111 aa21.78■■□□□ 1.08
HDAC6-202ENST00000376610 MUM1L1Q5H9M0 696 aa21.78■■□□□ 1.08
HDAC6-202ENST00000376610 RASGRP2Q7LDG7 609 aa21.78■■□□□ 1.08
HDAC6-202ENST00000376610 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.78■■□□□ 1.08
HDAC6-202ENST00000376610 TMEM199Q8N511 208 aa21.78■■□□□ 1.08
HDAC6-202ENST00000376610 TCP11L1Q9NUJ3 509 aa21.78■■□□□ 1.08
HDAC6-202ENST00000376610 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.77■■□□□ 1.08
HDAC6-202ENST00000376610 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.77■■□□□ 1.08
HDAC6-202ENST00000376610 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.77■■□□□ 1.08
HDAC6-202ENST00000376610 HSPD1P10809 573 aaKnown RBP21.77■■□□□ 1.08
HDAC6-202ENST00000376610 PCP11498 1178 aaKnown RBP21.77■■□□□ 1.08
HDAC6-202ENST00000376610 NKX3-2P78367 333 aa21.77■■□□□ 1.08
HDAC6-202ENST00000376610 NMIQ13287 307 aaPredicted RBP21.77■■□□□ 1.08
HDAC6-202ENST00000376610 FSCN1Q16658 493 aaKnown RBP21.77■■□□□ 1.08
HDAC6-202ENST00000376610 SYDE2Q5VT97 1194 aa21.77■■□□□ 1.08
HDAC6-202ENST00000376610 IQSEC1Q6DN90 963 aa21.77■■□□□ 1.08
HDAC6-202ENST00000376610 RILPL2Q969X0 211 aa21.77■■□□□ 1.08
HDAC6-202ENST00000376610 TMEM47Q9BQJ4 181 aa21.77■■□□□ 1.08
HDAC6-202ENST00000376610 SEZ6LQ9BYH1 1024 aa21.77■■□□□ 1.08
HDAC6-202ENST00000376610 RANBP17Q9H2T7 1088 aaKnown RBP21.77■■□□□ 1.08
HDAC6-202ENST00000376610 VTA1Q9NP79 307 aa21.77■■□□□ 1.08
HDAC6-202ENST00000376610 PNMA2Q9UL42 364 aa21.77■■□□□ 1.08
HDAC6-202ENST00000376610 CCDC171Q6TFL3 1326 aa21.77■■□□□ 1.07
HDAC6-202ENST00000376610 SLC16A2P36021 539 aa21.76■■□□□ 1.07
HDAC6-202ENST00000376610 CXCL17Q6UXB2 119 aa21.76■■□□□ 1.07
HDAC6-202ENST00000376610 BTNL9Q6UXG8 535 aa21.76■■□□□ 1.07
HDAC6-202ENST00000376610 MFSD6Q6ZSS7 791 aa21.76■■□□□ 1.07
HDAC6-202ENST00000376610 EEPD1Q7L9B9 569 aa21.76■■□□□ 1.07
HDAC6-202ENST00000376610 FBXO16Q8IX29 292 aaPredicted RBP21.76■■□□□ 1.07
HDAC6-202ENST00000376610 FAM126BQ8IXS8 530 aa21.76■■□□□ 1.07
HDAC6-202ENST00000376610 LNPKQ9C0E8 428 aa21.76■■□□□ 1.07
HDAC6-202ENST00000376610 TTYH1Q9H313 450 aaPredicted RBP21.76■■□□□ 1.07
HDAC6-202ENST00000376610 RNF41Q9H4P4 317 aaPredicted RBP21.76■■□□□ 1.07
HDAC6-202ENST00000376610 GPCPD1Q9NPB8 672 aa21.76■■□□□ 1.07
HDAC6-202ENST00000376610 GNEQ9Y223 722 aaKnown RBP21.76■■□□□ 1.07
HDAC6-202ENST00000376610 LRRC37A2A6NM11 1700 aa21.75■■□□□ 1.07
HDAC6-202ENST00000376610 CTAGE5O15320 804 aa21.75■■□□□ 1.07
HDAC6-202ENST00000376610 DYNC1LI2O43237 492 aaPredicted RBP21.75■■□□□ 1.07
HDAC6-202ENST00000376610 FOSL2P15408 326 aa21.75■■□□□ 1.07
HDAC6-202ENST00000376610 SMPD1P17405 629 aa21.75■■□□□ 1.07
HDAC6-202ENST00000376610 HAND2P61296 217 aa21.75■■□□□ 1.07
HDAC6-202ENST00000376610 TTBK2Q6IQ55 1244 aa21.75■■□□□ 1.07
HDAC6-202ENST00000376610 PSRC1Q6PGN9 363 aaPredicted RBP21.75■■□□□ 1.07
HDAC6-202ENST00000376610 MAFAQ8NHW3 353 aaPredicted RBP21.75■■□□□ 1.07
HDAC6-202ENST00000376610 MPHOSPH6Q99547 160 aaKnown RBP21.75■■□□□ 1.07
HDAC6-202ENST00000376610 PPP1R12CQ9BZL4 782 aa21.75■■□□□ 1.07
HDAC6-202ENST00000376610 RWDD1Q9H446 243 aaPredicted RBP21.75■■□□□ 1.07
HDAC6-202ENST00000376610 Q9Y3F1 56 aa21.75■■□□□ 1.07
HDAC6-202ENST00000376610 FRMPD2Q68DX3 1309 aaPredicted RBP21.75■■□□□ 1.07
HDAC6-202ENST00000376610 UNC80Q8N2C7 3258 aa21.74■■□□□ 1.07
HDAC6-202ENST00000376610 LOC102724159A0A0B4J2E5 919 aa21.74■■□□□ 1.07
HDAC6-202ENST00000376610 PTPDC1A2A3K4 754 aa21.74■■□□□ 1.07
HDAC6-202ENST00000376610 PWP2Q15269 919 aaKnown RBP21.74■■□□□ 1.07
HDAC6-202ENST00000376610 AKNAD1Q5T1N1 836 aa21.74■■□□□ 1.07
HDAC6-202ENST00000376610 KIAA1211Q6ZU35 1233 aa21.74■■□□□ 1.07
HDAC6-202ENST00000376610 ZNF589Q86UQ0 364 aaPredicted RBP21.74■■□□□ 1.07
HDAC6-202ENST00000376610 MYLIPQ8WY64 445 aa21.74■■□□□ 1.07
HDAC6-202ENST00000376610 TTC14Q96N46 770 aa21.74■■□□□ 1.07
HDAC6-202ENST00000376610 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.74■■□□□ 1.075e-7■■■□□ 15.3
HDAC6-202ENST00000376610 ASTN1O14525 1302 aa21.74■■□□□ 1.07
HDAC6-202ENST00000376610 CSF2RAP15509 400 aa21.73■■□□□ 1.07
HDAC6-202ENST00000376610 DNAJB2P25686 324 aa21.73■■□□□ 1.07
HDAC6-202ENST00000376610 BAATQ14032 418 aaPredicted RBP21.73■■□□□ 1.07
HDAC6-202ENST00000376610 TAPT1Q6NXT6 567 aa21.73■■□□□ 1.07
HDAC6-202ENST00000376610 PDGFCQ9NRA1 345 aa21.73■■□□□ 1.07
HDAC6-202ENST00000376610 PDHBP11177 359 aa21.72■■□□□ 1.07
HDAC6-202ENST00000376610 ALDH5A1P51649 535 aaPredicted RBP21.72■■□□□ 1.07
HDAC6-202ENST00000376610 ITGA7Q13683 1181 aa21.72■■□□□ 1.07
HDAC6-202ENST00000376610 B4GALNT3Q6L9W6 998 aa21.72■■□□□ 1.07
HDAC6-202ENST00000376610 MORC4Q8TE76 937 aa21.72■■□□□ 1.07
HDAC6-202ENST00000376610 ESR2Q92731 530 aa21.72■■□□□ 1.07
HDAC6-202ENST00000376610 MTIF3Q9H2K0 278 aaKnown RBP21.72■■□□□ 1.07
HDAC6-202ENST00000376610 DDX49Q9Y6V7 483 aaKnown RBP21.72■■□□□ 1.07
HDAC6-202ENST00000376610 CDH23Q9H251 3354 aa21.72■■□□□ 1.07
HDAC6-202ENST00000376610 LCTP09848 1927 aa21.72■■□□□ 1.07
HDAC6-202ENST00000376610 NFIBO00712 420 aa21.71■■□□□ 1.07
HDAC6-202ENST00000376610 CD4P01730 458 aa21.71■■□□□ 1.07
HDAC6-202ENST00000376610 CALML3P27482 149 aa21.71■■□□□ 1.07
HDAC6-202ENST00000376610 TMEM240Q5SV17 173 aa21.71■■□□□ 1.07
HDAC6-202ENST00000376610 SLC43A3Q8NBI5 491 aa21.71■■□□□ 1.07
HDAC6-202ENST00000376610 HIPK3Q9H422 1215 aa21.71■■□□□ 1.07
HDAC6-202ENST00000376610 B4DLN1 442 aa21.7■■□□□ 1.06
HDAC6-202ENST00000376610 ZNF213O14771 459 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms