RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 PPFIA1Q13136 1202 aa12.1□□□□□ -0.47
MDC1-201ENST00000376406 NLRP10Q86W26 655 aa12.1□□□□□ -0.47
MDC1-201ENST00000376406 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.1□□□□□ -0.47
MDC1-201ENST00000376406 CLIC6Q96NY7 704 aa12.1□□□□□ -0.47
MDC1-201ENST00000376406 PANK4Q9NVE7 773 aa12.1□□□□□ -0.47
MDC1-201ENST00000376406 IQGAP1P46940 1657 aa12.1□□□□□ -0.47
MDC1-201ENST00000376406 RNF26Q9BY78 433 aaPredicted RBP12.1□□□□□ -0.47
MDC1-201ENST00000376406 TRIM7Q9C029 511 aa12.1□□□□□ -0.47
MDC1-201ENST00000376406 RASSF4Q9H2L5 321 aa12.1□□□□□ -0.47
MDC1-201ENST00000376406 CUEDC2Q9H467 287 aa12.1□□□□□ -0.47
MDC1-201ENST00000376406 FANCLQ9NW38 375 aa12.1□□□□□ -0.47
MDC1-201ENST00000376406 PARP2Q9UGN5 583 aa12.1□□□□□ -0.47
MDC1-201ENST00000376406 DDX25Q9UHL0 483 aaKnown RBP12.1□□□□□ -0.47
MDC1-201ENST00000376406 PRR36Q9H6K5 1346 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 N4BP1O75113 896 aaKnown RBP12.09□□□□□ -0.47
MDC1-201ENST00000376406 PEX26Q7Z412 305 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 CSRNP1Q96S65 589 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 IKBKBO14920 756 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 PPP2R5AQ15172 486 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 POTEDQ86YR6 584 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 FAM207AQ9NSI2 230 aaPredicted RBP12.09□□□□□ -0.47
MDC1-201ENST00000376406 NRBP2Q9NSY0 501 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 BSDC1Q9NW68 430 aaPredicted RBP12.09□□□□□ -0.47
MDC1-201ENST00000376406 RNASE9P60153 205 aaKnown RBP12.09□□□□□ -0.47
MDC1-201ENST00000376406 GPBP1Q86WP2 473 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 NELFCDQ8IXH7 590 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 PAGR1Q9BTK6 254 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 NARFQ9UHQ1 456 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 EXOC3O60645 756 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 ERFEQ4G0M1 354 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 PPP1R13BQ96KQ4 1090 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 FAM81BQ96LP2 452 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 RAB17Q9H0T7 212 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 SUGT1Q9Y2Z0 365 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 NCOA3Q9Y6Q9 1424 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 CEP104O60308 925 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 XRCC5P13010 732 aaKnown RBP12.09□□□□□ -0.47
MDC1-201ENST00000376406 PHKA1P46020 1223 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 YARSP54577 528 aaKnown RBP12.09□□□□□ -0.47
MDC1-201ENST00000376406 MAIP1Q8WWC4 291 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 CTTNBP2NLQ9P2B4 639 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 USP32Q8NFA0 1604 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 BTBD18B2RXH4 712 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 INF2Q27J81 1249 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 FAM160B2Q86V87 743 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 RETREG2Q8NC44 543 aa12.09□□□□□ -0.47
MDC1-201ENST00000376406 FAM193BQ96PV7 902 aaPredicted RBP12.09□□□□□ -0.47
MDC1-201ENST00000376406 ABT1Q9ULW3 272 aaKnown RBP12.09□□□□□ -0.47
MDC1-201ENST00000376406 FRMPD2Q68DX3 1309 aaPredicted RBP12.08□□□□□ -0.47
MDC1-201ENST00000376406 DDX39AO00148 427 aaKnown RBP12.08□□□□□ -0.48
MDC1-201ENST00000376406 DOK7Q18PE1 504 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 PHLPP2Q6ZVD8 1323 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 GRIN3BO60391 1043 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 TFDP1Q14186 410 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 DEPTORQ8TB45 409 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 PUS3Q9BZE2 481 aaKnown RBP12.08□□□□□ -0.48
MDC1-201ENST00000376406 CCPG1Q9ULG6 757 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 TCP10L2B9ZVM9 353 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 PTGDRQ13258 359 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 MKRN1Q9UHC7 482 aaKnown RBP12.08□□□□□ -0.48
MDC1-201ENST00000376406 PCDHA4Q9UN74 947 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 PRPF6O94906 941 aaKnown RBP12.08□□□□□ -0.48
MDC1-201ENST00000376406 MMP10P09238 476 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 FYB2Q5VWT5 728 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 ZNF365Q70YC5 407 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 GIMAP8Q8ND71 665 aaPredicted RBP12.08□□□□□ -0.48
MDC1-201ENST00000376406 SLC10A4Q96EP9 437 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 ZNF215Q9UL58 517 aaPredicted RBP12.08□□□□□ -0.48
MDC1-201ENST00000376406 SOS2Q07890 1332 aaPredicted RBP12.08□□□□□ -0.48
MDC1-201ENST00000376406 VIMP08670 466 aaKnown RBP12.08□□□□□ -0.48
MDC1-201ENST00000376406 LRMPQ12912 555 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 INTS8Q75QN2 995 aaKnown RBP12.08□□□□□ -0.48
MDC1-201ENST00000376406 AMNQ9BXJ7 453 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 KLRF2D3W0D1 207 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 DMP1Q13316 513 aaPredicted RBP12.08□□□□□ -0.48
MDC1-201ENST00000376406 VPS72Q15906 364 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 MIER3Q7Z3K6 550 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 DAAM2Q86T65 1068 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 GSDMAQ96QA5 445 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 TEKT3Q9BXF9 490 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 SERPINB13Q9UIV8 391 aa12.08□□□□□ -0.48
MDC1-201ENST00000376406 ASNSP08243 561 aa12.07□□□□□ -0.48
MDC1-201ENST00000376406 APOA5Q6Q788 366 aa12.07□□□□□ -0.48
MDC1-201ENST00000376406 NCAPG2Q86XI2 1143 aa12.07□□□□□ -0.48
MDC1-201ENST00000376406 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.07□□□□□ -0.48
MDC1-201ENST00000376406 PCDHA12Q9UN75 941 aa12.07□□□□□ -0.48
MDC1-201ENST00000376406 NDUFAB1O14561 156 aa12.07□□□□□ -0.48
MDC1-201ENST00000376406 STAT2P52630 851 aa12.07□□□□□ -0.48
MDC1-201ENST00000376406 FOXP4Q8IVH2 680 aaPredicted RBP12.07□□□□□ -0.48
MDC1-201ENST00000376406 ZBTB9Q96C00 473 aa12.07□□□□□ -0.48
MDC1-201ENST00000376406 RIOK1Q9BRS2 568 aaKnown RBP12.07□□□□□ -0.48
MDC1-201ENST00000376406 AMFRQ9UKV5 643 aa12.07□□□□□ -0.48
MDC1-201ENST00000376406 TRPC6Q9Y210 931 aa12.07□□□□□ -0.48
MDC1-201ENST00000376406 HYOU1Q9Y4L1 999 aa12.07□□□□□ -0.48
MDC1-201ENST00000376406 SH2B2O14492 632 aaPredicted RBP12.07□□□□□ -0.48
MDC1-201ENST00000376406 GCFC2P16383 781 aaKnown RBP12.07□□□□□ -0.48
MDC1-201ENST00000376406 PRKG1Q13976 671 aa12.07□□□□□ -0.48
MDC1-201ENST00000376406 KLHL7Q8IXQ5 586 aa12.07□□□□□ -0.48
MDC1-201ENST00000376406 C10orf67Q8IYJ2 551 aa12.07□□□□□ -0.48
MDC1-201ENST00000376406 GPKOWQ92917 476 aaPredicted RBP eCLIP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms