RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 CCDC174Q6PII3 467 aa11.99□□□□□ -0.49
PDPN-203ENST00000376061 REXO1Q8N1G1 1221 aaKnown RBP11.99□□□□□ -0.49
PDPN-203ENST00000376061 LEO1Q8WVC0 666 aaPredicted RBP11.99□□□□□ -0.49
PDPN-203ENST00000376061 SCAND2PQ9GZW5 306 aaPredicted RBP11.99□□□□□ -0.49
PDPN-203ENST00000376061 GPBP1L1Q9HC44 474 aaPredicted RBP11.99□□□□□ -0.49
PDPN-203ENST00000376061 RIC8AQ9NPQ8 531 aa11.99□□□□□ -0.49
PDPN-203ENST00000376061 PCDHA6Q9UN73 950 aa11.99□□□□□ -0.49
PDPN-203ENST00000376061 PCDHA8Q9Y5H6 950 aa11.99□□□□□ -0.49
PDPN-203ENST00000376061 ZNF536O15090 1300 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 CXCL11O14625 94 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 KIF3CO14782 793 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 PRPF40AO75400 957 aaKnown RBP11.98□□□□□ -0.49
PDPN-203ENST00000376061 PTMSP20962 102 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 NASPP49321 788 aaPredicted RBP11.98□□□□□ -0.49
PDPN-203ENST00000376061 CEBPZQ03701 1054 aaKnown RBP11.98□□□□□ -0.49
PDPN-203ENST00000376061 CSPP1Q1MSJ5 1256 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 TREML2Q5T2D2 321 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 CST9Q5W186 159 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 PIK3AP1Q6ZUJ8 805 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 C2orf69Q8N8R5 385 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 PROCA1Q8NCQ7 364 aaPredicted RBP11.98□□□□□ -0.49
PDPN-203ENST00000376061 BICD2Q8TD16 824 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 SLC39A7Q92504 469 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 CUL5Q93034 780 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 ATG4CQ96DT6 458 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 SLC10A4Q96EP9 437 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 SPATA32Q96LK8 384 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 SLC38A10Q9HBR0 1119 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 POLR3EQ9NVU0 708 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 RTEL1Q9NZ71 1219 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 CFAP45Q9UL16 551 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 CLIC4Q9Y696 253 aa11.98□□□□□ -0.49
PDPN-203ENST00000376061 MYPNQ86TC9 1320 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 PASKQ96RG2 1323 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 USP17L15C9J2P7 530 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 USP17L13C9JLJ4 530 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 USP17L11C9JVI0 530 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 USP17L18D6R9N7 530 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 USP17L22D6RA61 530 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 USP17L17D6RBQ6 530 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 USP17L19D6RCP7 530 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 USP17L20D6RJB6 530 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 OPLAHO14841 1288 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 YEATS4O95619 227 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 ICAM1P05362 532 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 C7P10643 843 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 USP17L24Q0WX57 530 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 TRAF1Q13077 416 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 MOGSQ13724 837 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 UBE2SQ16763 222 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 RILPL1Q5EBL4 403 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 ANO1Q5XXA6 986 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 ASTLQ6HA08 431 aaPredicted RBP11.97□□□□□ -0.49
PDPN-203ENST00000376061 GADL1Q6ZQY3 521 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 CATSPERGQ6ZRH7 1159 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 KRT25Q7Z3Z0 450 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 WNK4Q96J92 1243 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 TMEM260Q9NX78 707 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 RCOR1Q9UKL0 485 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 NOL7Q9UMY1 257 aaKnown RBP11.97□□□□□ -0.49
PDPN-203ENST00000376061 ABCB11O95342 1321 aa11.97□□□□□ -0.49
PDPN-203ENST00000376061 CCDC194A0A1B0GVG4 234 aa11.96□□□□□ -0.49
PDPN-203ENST00000376061 VWA5AO00534 786 aa11.96□□□□□ -0.49
PDPN-203ENST00000376061 WNT7AO00755 349 aa11.96□□□□□ -0.49
PDPN-203ENST00000376061 GADD45BO75293 160 aaPredicted RBP11.96□□□□□ -0.49
PDPN-203ENST00000376061 CLK2P49760 499 aaKnown RBP11.96□□□□□ -0.49
PDPN-203ENST00000376061 MRPL12P52815 198 aaKnown RBP11.96□□□□□ -0.49
PDPN-203ENST00000376061 MAMSTRQ6ZN01 415 aa11.96□□□□□ -0.49
PDPN-203ENST00000376061 REPS2Q8NFH8 660 aa11.96□□□□□ -0.49
PDPN-203ENST00000376061 GLT8D2Q9H1C3 349 aa11.96□□□□□ -0.49
PDPN-203ENST00000376061 PSTPIP2Q9H939 334 aa11.96□□□□□ -0.49
PDPN-203ENST00000376061 CCPG1Q9ULG6 757 aa11.96□□□□□ -0.49
PDPN-203ENST00000376061 ADAMTS5Q9UNA0 930 aa11.96□□□□□ -0.49
PDPN-203ENST00000376061 AGTPBP1Q9UPW5 1226 aa11.96□□□□□ -0.49
PDPN-203ENST00000376061 SPDYE16A6NNV3 312 aaPredicted RBP11.95□□□□□ -0.5
PDPN-203ENST00000376061 ATMINO43313 823 aaPredicted RBP11.95□□□□□ -0.5
PDPN-203ENST00000376061 ZBED4O75132 1171 aa11.95□□□□□ -0.5
PDPN-203ENST00000376061 FDX1P10109 184 aa11.95□□□□□ -0.5
PDPN-203ENST00000376061 TRAPPC10P48553 1259 aa11.95□□□□□ -0.5
PDPN-203ENST00000376061 SNAPC2Q13487 334 aa11.95□□□□□ -0.5
PDPN-203ENST00000376061 COG2Q14746 738 aa11.95□□□□□ -0.5
PDPN-203ENST00000376061 STK38Q15208 465 aa11.95□□□□□ -0.5
PDPN-203ENST00000376061 NONOQ15233 471 aaKnown RBP eCLIP11.95□□□□□ -0.5
PDPN-203ENST00000376061 PTPAQ15257 358 aa11.95□□□□□ -0.5
PDPN-203ENST00000376061 SF3A1Q15459 793 aaKnown RBP11.95□□□□□ -0.5
PDPN-203ENST00000376061 TTC38Q5R3I4 469 aa11.95□□□□□ -0.5
PDPN-203ENST00000376061 JAKMIP3Q5VZ66 844 aa11.95□□□□□ -0.5
PDPN-203ENST00000376061 LINC00301Q8NCQ3 95 aa11.95□□□□□ -0.5
PDPN-203ENST00000376061 MS4A3Q96HJ5 214 aa11.95□□□□□ -0.5
PDPN-203ENST00000376061 AGBL1Q96MI9 1066 aa11.95□□□□□ -0.5
PDPN-203ENST00000376061 RAVER2Q9HCJ3 691 aaKnown RBP11.95□□□□□ -0.5
PDPN-203ENST00000376061 BIN2Q9UBW5 565 aaPredicted RBP11.95□□□□□ -0.5
PDPN-203ENST00000376061 PCDHB6Q9Y5E3 794 aa11.95□□□□□ -0.5
PDPN-203ENST00000376061 LCTP09848 1927 aa11.95□□□□□ -0.5
PDPN-203ENST00000376061 MEIS2O14770 477 aa11.94□□□□□ -0.5
PDPN-203ENST00000376061 ATP2B1P20020 1258 aa11.94□□□□□ -0.5
PDPN-203ENST00000376061 HOXA7P31268 230 aaPredicted RBP11.94□□□□□ -0.5
PDPN-203ENST00000376061 HUNKP57058 714 aa11.94□□□□□ -0.5
PDPN-203ENST00000376061 UBE2HP62256 183 aa11.94□□□□□ -0.5
PDPN-203ENST00000376061 SLC39A14Q15043 492 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms