RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 VPS16Q9H269 839 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 IFT122Q9HBG6 1241 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 MRFAP1Q9Y605 127 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 FAM169AQ9Y6X4 670 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 LRRC7Q96NW7 1537 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 MGEA5O60502 916 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 GGPS1O95749 300 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 H2AFZP0C0S5 128 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 CALCRLQ16602 461 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 ANKRD20A4Q4UJ75 823 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 ANKRD20A8PQ5CZ79 823 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 ANKRD20A2Q5SQ80 823 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 ANKRD20A1Q5TYW2 823 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 H2AFVQ71UI9 128 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 LRRC8CQ8TDW0 803 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 KLHL29Q96CT2 875 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 HOOK2Q96ED9 719 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 PYCARDQ9ULZ3 195 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 MAPK13O15264 365 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 EEF2P13639 858 aaKnown RBP9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 RHOT2Q8IXI1 618 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 CDCA7Q9BWT1 371 aaPredicted RBP9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 GSTA2P09210 222 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 HNRNPH2P55795 449 aaKnown RBP9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 KCTD17Q8N5Z5 321 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 SRRM3A6NNA2 597 aaPredicted RBP9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 NDUFA8P51970 172 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 GCKRQ14397 625 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 SRRM1Q8IYB3 904 aaKnown RBP9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 TBC1D22AQ8WUA7 517 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 LPIN2Q92539 896 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 PDE4DIPQ5VU43 2346 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 GIPC1O14908 333 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 KIF11P52732 1056 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 STX17P56962 302 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 HOMEZQ8IX15 550 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 MTMR7Q9Y216 660 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 UBN2Q6ZU65 1347 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 TSPYL6Q8N831 410 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 RNF8O76064 485 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 IFNAR1P17181 557 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 TCEANC2Q96MN5 208 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 SLITRK6Q9H5Y7 841 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 SH3GLB2Q9NR46 395 aa9.64□□□□□ -0.87
SHROOM4-202ENST00000376020 SLC4A8Q2Y0W8 1093 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 TUBGCP2Q9BSJ2 902 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 DNM3Q9UQ16 869 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 MRPS35P82673 323 aaKnown RBP9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 RCSD1Q6JBY9 416 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 RPGRQ92834 1020 aaKnown RBP9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 AATFQ9NY61 560 aaKnown RBP eCLIP9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 ITIH6Q6UXX5 1313 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 GFPT2O94808 682 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 KPNA2P52292 529 aaKnown RBP9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 ZNF658Q5TYW1 1059 aaPredicted RBP9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 ZNF449Q6P9G9 518 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 TMEM60Q9H2L4 133 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 MLH3Q9UHC1 1453 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 PFASO15067 1338 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 ATXN2Q99700 1313 aaKnown RBP9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 E7ENQ6 273 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 DDX54Q8TDD1 881 aaKnown RBP9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 SDCCAG3Q96C92 435 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 CCDC124Q96CT7 223 aaKnown RBP9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 NDUFA13Q9P0J0 144 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 SCINQ9Y6U3 715 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 MFAP3LO75121 409 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 ADKP55263 362 aaKnown RBP9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 TFCP2Q12800 502 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 ZSCAN29Q8IWY8 852 aaPredicted RBP9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 ANKARQ7Z5J8 1434 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 ABCA6Q8N139 1617 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 MTHFSDQ2M296 383 aaKnown RBP9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 KMT5BQ4FZB7 885 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 MAP3K7O43318 606 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 TPD52P55327 224 aaPredicted RBP9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 GUCY2DQ02846 1103 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 TEX2Q8IWB9 1127 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 LRRC2Q9BYS8 371 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 TMX1Q9H3N1 280 aa9.63□□□□□ -0.87
SHROOM4-202ENST00000376020 CHD2O14647 1828 aaKnown RBP9.62□□□□□ -0.87
SHROOM4-202ENST00000376020 TTI1O43156 1089 aa9.62□□□□□ -0.87
SHROOM4-202ENST00000376020 NLRP7Q8WX94 980 aa9.62□□□□□ -0.87
SHROOM4-202ENST00000376020 LRWD1Q9UFC0 647 aa9.62□□□□□ -0.87
SHROOM4-202ENST00000376020 POLR2BP30876 1174 aaKnown RBP9.62□□□□□ -0.87
SHROOM4-202ENST00000376020 HSPA1LP34931 641 aa9.62□□□□□ -0.87
SHROOM4-202ENST00000376020 PLEKHG3A1L390 1219 aa9.62□□□□□ -0.87
SHROOM4-202ENST00000376020 RRAGAQ7L523 313 aa9.62□□□□□ -0.87
SHROOM4-202ENST00000376020 KCND1Q9NSA2 647 aa9.62□□□□□ -0.87
SHROOM4-202ENST00000376020 PPLO60437 1756 aa9.62□□□□□ -0.87
SHROOM4-202ENST00000376020 MEFVO15553 781 aaPredicted RBP9.62□□□□□ -0.87
SHROOM4-202ENST00000376020 RPN1P04843 607 aaKnown RBP9.62□□□□□ -0.87
SHROOM4-202ENST00000376020 P4HA1P13674 534 aa9.62□□□□□ -0.87
SHROOM4-202ENST00000376020 GAP43P17677 238 aa9.62□□□□□ -0.87
SHROOM4-202ENST00000376020 ARID5AQ03989 594 aa9.62□□□□□ -0.87
SHROOM4-202ENST00000376020 ZNF790Q6PG37 636 aa9.62□□□□□ -0.87
SHROOM4-202ENST00000376020 COG7P83436 770 aa9.62□□□□□ -0.87
SHROOM4-202ENST00000376020 FAF1Q9UNN5 650 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms