RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 COA7Q96BR5 231 aa20.46■□□□□ 0.87
C6orf48-204ENST00000375639 TRERF1Q96PN7 1200 aa20.46■□□□□ 0.87
C6orf48-204ENST00000375639 LLPHQ9BRT6 129 aaKnown RBP20.46■□□□□ 0.87
C6orf48-204ENST00000375639 EFCC1Q9HA90 598 aa20.46■□□□□ 0.87
C6orf48-204ENST00000375639 PCDHA1Q9Y5I3 950 aa20.46■□□□□ 0.87
C6orf48-204ENST00000375639 MYH6P13533 1939 aa20.46■□□□□ 0.87
C6orf48-204ENST00000375639 PTPDC1A2A3K4 754 aa20.45■□□□□ 0.86
C6orf48-204ENST00000375639 JAK2O60674 1132 aa20.45■□□□□ 0.86
C6orf48-204ENST00000375639 FKTNO75072 461 aa20.45■□□□□ 0.86
C6orf48-204ENST00000375639 COPB2P35606 906 aa20.45■□□□□ 0.86
C6orf48-204ENST00000375639 KIF22Q14807 665 aa20.45■□□□□ 0.86
C6orf48-204ENST00000375639 TKFCQ3LXA3 575 aa20.45■□□□□ 0.86
C6orf48-204ENST00000375639 SHCBP1Q8NEM2 672 aa20.45■□□□□ 0.86
C6orf48-204ENST00000375639 DDX11Q96FC9 970 aa20.45■□□□□ 0.86
C6orf48-204ENST00000375639 MROH8Q9H579 483 aa20.45■□□□□ 0.86
C6orf48-204ENST00000375639 RNF146Q9NTX7 359 aa20.45■□□□□ 0.86
C6orf48-204ENST00000375639 ORC3Q9UBD5 711 aaPredicted RBP20.45■□□□□ 0.86
C6orf48-204ENST00000375639 DEXIO95424 95 aa20.44■□□□□ 0.86
C6orf48-204ENST00000375639 SCG2P13521 617 aa20.44■□□□□ 0.86
C6orf48-204ENST00000375639 MAPK4P31152 587 aa20.44■□□□□ 0.86
C6orf48-204ENST00000375639 LACTBP83111 547 aaPredicted RBP20.44■□□□□ 0.86
C6orf48-204ENST00000375639 PKN1Q16512 942 aa20.44■□□□□ 0.86
C6orf48-204ENST00000375639 PFKFB3Q16875 520 aaPredicted RBP20.44■□□□□ 0.86
C6orf48-204ENST00000375639 NOM1Q5C9Z4 860 aaKnown RBP20.44■□□□□ 0.86
C6orf48-204ENST00000375639 CHST13Q8NET6 341 aa20.44■□□□□ 0.86
C6orf48-204ENST00000375639 ZNF296Q8WUU4 475 aaPredicted RBP20.44■□□□□ 0.86
C6orf48-204ENST00000375639 GPKOWQ92917 476 aaPredicted RBP eCLIP20.44■□□□□ 0.865e-16■■□□□ 13.4
C6orf48-204ENST00000375639 MRPL11Q9Y3B7 192 aaKnown RBP20.44■□□□□ 0.86
C6orf48-204ENST00000375639 ABCB11O95342 1321 aa20.44■□□□□ 0.86
C6orf48-204ENST00000375639 MUM1L1Q5H9M0 696 aa20.43■□□□□ 0.86
C6orf48-204ENST00000375639 WWC2Q6AWC2 1192 aa20.43■□□□□ 0.86
C6orf48-204ENST00000375639 CD99L2Q8TCZ2 262 aa20.43■□□□□ 0.86
C6orf48-204ENST00000375639 ACAD9Q9H845 621 aa20.43■□□□□ 0.86
C6orf48-204ENST00000375639 FBXO40Q9UH90 709 aa20.43■□□□□ 0.86
C6orf48-204ENST00000375639 STK36Q9NRP7 1315 aa20.43■□□□□ 0.86
C6orf48-204ENST00000375639 SMCHD1A6NHR9 2005 aa20.43■□□□□ 0.86
C6orf48-204ENST00000375639 TNPO2O14787 897 aaKnown RBP20.42■□□□□ 0.86
C6orf48-204ENST00000375639 PSMC4P43686 418 aa20.42■□□□□ 0.86
C6orf48-204ENST00000375639 FCGRTP55899 365 aa20.42■□□□□ 0.86
C6orf48-204ENST00000375639 CUL4AQ13619 759 aa20.42■□□□□ 0.86
C6orf48-204ENST00000375639 PLEKHH3Q7Z736 793 aa20.42■□□□□ 0.86
C6orf48-204ENST00000375639 SMARCC2Q8TAQ2 1214 aa20.42■□□□□ 0.86
C6orf48-204ENST00000375639 ERO1AQ96HE7 468 aa20.42■□□□□ 0.86
C6orf48-204ENST00000375639 ARHGAP39Q9C0H5 1083 aa20.42■□□□□ 0.86
C6orf48-204ENST00000375639 IVNS1ABPQ9Y6Y0 642 aa20.42■□□□□ 0.86
C6orf48-204ENST00000375639 hCG_1984214I3L0E3 225 aa20.41■□□□□ 0.86
C6orf48-204ENST00000375639 FDPSP14324 419 aaKnown RBP20.41■□□□□ 0.86
C6orf48-204ENST00000375639 NAPAP54920 295 aa20.41■□□□□ 0.86
C6orf48-204ENST00000375639 HMGN5P82970 282 aaKnown RBP20.41■□□□□ 0.86
C6orf48-204ENST00000375639 NSMFQ6X4W1 530 aa20.41■□□□□ 0.86
C6orf48-204ENST00000375639 GPR142Q7Z601 462 aa20.41■□□□□ 0.86
C6orf48-204ENST00000375639 ZNF713Q8N859 430 aaPredicted RBP20.41■□□□□ 0.86
C6orf48-204ENST00000375639 CLEC4DQ8WXI8 215 aa20.41■□□□□ 0.86
C6orf48-204ENST00000375639 WASF1Q92558 559 aa20.41■□□□□ 0.86
C6orf48-204ENST00000375639 AIFM3Q96NN9 605 aa20.41■□□□□ 0.86
C6orf48-204ENST00000375639 BARHL2Q9NY43 387 aa20.41■□□□□ 0.86
C6orf48-204ENST00000375639 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.41■□□□□ 0.86
C6orf48-204ENST00000375639 STXBP3O00186 592 aa20.4■□□□□ 0.86
C6orf48-204ENST00000375639 NFIBO00712 420 aa20.4■□□□□ 0.86
C6orf48-204ENST00000375639 FCER1AP12319 257 aa20.4■□□□□ 0.86
C6orf48-204ENST00000375639 CTGFP29279 349 aa20.4■□□□□ 0.86
C6orf48-204ENST00000375639 BECN1Q14457 450 aa20.4■□□□□ 0.86
C6orf48-204ENST00000375639 ANKRD35Q8N283 1001 aa20.4■□□□□ 0.86
C6orf48-204ENST00000375639 FAM184AQ8NB25 1140 aa20.4■□□□□ 0.86
C6orf48-204ENST00000375639 TRIM47Q96LD4 638 aa20.4■□□□□ 0.86
C6orf48-204ENST00000375639 MMP19Q99542 508 aa20.4■□□□□ 0.86
C6orf48-204ENST00000375639 ALG1Q9BT22 464 aa20.4■□□□□ 0.86
C6orf48-204ENST00000375639 FOXD4L1Q9NU39 408 aa20.4■□□□□ 0.86
C6orf48-204ENST00000375639 SMC3Q9UQE7 1217 aa20.4■□□□□ 0.86
C6orf48-204ENST00000375639 STRNO43815 780 aa20.39■□□□□ 0.85
C6orf48-204ENST00000375639 HSP90AA1P07900 732 aaKnown RBP20.39■□□□□ 0.85
C6orf48-204ENST00000375639 PTPREP23469 700 aa20.39■□□□□ 0.85
C6orf48-204ENST00000375639 KCTD2Q14681 263 aa20.39■□□□□ 0.85
C6orf48-204ENST00000375639 TYW1BQ6NUM6 668 aa20.39■□□□□ 0.85
C6orf48-204ENST00000375639 MCF2L2Q86YR7 1114 aa20.39■□□□□ 0.85
C6orf48-204ENST00000375639 TSHZ2Q9NRE2 1034 aa20.39■□□□□ 0.85
C6orf48-204ENST00000375639 VPS54Q9P1Q0 977 aa20.39■□□□□ 0.85
C6orf48-204ENST00000375639 FOSBP53539 338 aa20.38■□□□□ 0.85
C6orf48-204ENST00000375639 CAP1Q01518 475 aa20.38■□□□□ 0.85
C6orf48-204ENST00000375639 ARHGEF6Q15052 776 aa20.38■□□□□ 0.85
C6orf48-204ENST00000375639 PPP1R18Q6NYC8 613 aa20.38■□□□□ 0.85
C6orf48-204ENST00000375639 CCDC12Q8WUD4 166 aaPredicted RBP20.38■□□□□ 0.85
C6orf48-204ENST00000375639 TBC1D5Q92609 795 aa20.38■□□□□ 0.85
C6orf48-204ENST00000375639 A1CFQ9NQ94 594 aaKnown RBP20.38■□□□□ 0.85
C6orf48-204ENST00000375639 SMCO2A6NFE2 343 aa20.37■□□□□ 0.85
C6orf48-204ENST00000375639 CFBP00751 764 aa20.37■□□□□ 0.85
C6orf48-204ENST00000375639 XBP1P17861 261 aa20.37■□□□□ 0.85
C6orf48-204ENST00000375639 GJB2P29033 226 aa20.37■□□□□ 0.85
C6orf48-204ENST00000375639 ANP32AP39687 249 aaKnown RBP20.37■□□□□ 0.85
C6orf48-204ENST00000375639 BAATQ14032 418 aaPredicted RBP20.37■□□□□ 0.85
C6orf48-204ENST00000375639 RNF207Q6ZRF8 634 aa20.37■□□□□ 0.85
C6orf48-204ENST00000375639 CCDC148Q8NFR7 591 aa20.37■□□□□ 0.85
C6orf48-204ENST00000375639 INTS4Q96HW7 963 aaKnown RBP20.37■□□□□ 0.85
C6orf48-204ENST00000375639 PSTPIP2Q9H939 334 aa20.37■□□□□ 0.85
C6orf48-204ENST00000375639 SH3GLB2Q9NR46 395 aa20.37■□□□□ 0.85
C6orf48-204ENST00000375639 KIF3AQ9Y496 699 aa20.37■□□□□ 0.85
C6orf48-204ENST00000375639 MGAMO43451 1857 aa20.37■□□□□ 0.85
C6orf48-204ENST00000375639 ZSWIM8A7E2V4 1837 aa20.37■□□□□ 0.85
C6orf48-204ENST00000375639 SLC15A5A6NIM6 579 aa20.36■□□□□ 0.85
C6orf48-204ENST00000375639 OPLAHO14841 1288 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 580.6 ms