RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 IFIT3O14879 490 aaKnown RBP13.55□□□□□ -0.24
C9orf3-203ENST00000375315 NPR1P16066 1061 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 NR1I3Q14994 352 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 FAM47AQ5JRC9 791 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 CCDC51Q96ER9 411 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 SLC40A1Q9NP59 571 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 RREB1Q92766 1687 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 SLURP2P0DP57 97 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 ATP2B4P23634 1241 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 GBP2P32456 591 aaPredicted RBP13.54□□□□□ -0.24
C9orf3-203ENST00000375315 GCKP35557 465 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 CCNHP51946 323 aaPredicted RBP13.54□□□□□ -0.24
C9orf3-203ENST00000375315 ANTXR2P58335 489 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 CCNI2Q6ZMN8 369 aaPredicted RBP13.54□□□□□ -0.24
C9orf3-203ENST00000375315 CNGA4Q8IV77 575 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 CCDC13Q8IYE1 715 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 CPLX3Q8WVH0 158 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 ATP6V0A4Q9HBG4 840 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 DDX20Q9UHI6 824 aaKnown RBP13.54□□□□□ -0.24
C9orf3-203ENST00000375315 PCDHA5Q9Y5H7 936 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 MROH7-TTC4A0A0A0MT08 1334 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 UBR3Q6ZT12 1888 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 SCN7AQ01118 1682 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 ZEB2O60315 1214 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 SLC8A1P32418 973 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 SLC8A3P57103 927 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 PDE4BQ07343 736 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 ADCY2Q08462 1091 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 RBL2Q08999 1139 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 TMEM67Q5HYA8 995 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 KIAA0825Q8IV33 1275 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 SH3RF3Q8TEJ3 882 aaPredicted RBP13.54□□□□□ -0.24
C9orf3-203ENST00000375315 MASTLQ96GX5 879 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 ZSWIM5Q9P217 1185 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 FAM184BQ9ULE4 1060 aa13.54□□□□□ -0.24
C9orf3-203ENST00000375315 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.54□□□□□ -0.24
C9orf3-203ENST00000375315 CPLX1O14810 134 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 MARCKSP29966 332 aaPredicted RBP13.53□□□□□ -0.24
C9orf3-203ENST00000375315 CACNB3P54284 484 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 NAP1L1P55209 391 aaKnown RBP13.53□□□□□ -0.24
C9orf3-203ENST00000375315 ICA1Q05084 483 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 SEMA3FQ13275 785 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 PDCLQ13371 301 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 TMTC1Q8IUR5 882 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 PARP9Q8IXQ6 854 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 ZNF483Q8TF39 744 aaPredicted RBP13.53□□□□□ -0.24
C9orf3-203ENST00000375315 DYNLL2Q96FJ2 89 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 ACTR5Q9H9F9 607 aaPredicted RBP13.53□□□□□ -0.24
C9orf3-203ENST00000375315 HPSEQ9Y251 543 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 ANKRD33BA6NCL7 494 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 MFAP3LO75121 409 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 ALDH1B1P30837 517 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 SLC39A14Q15043 492 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 TRAPPC11Q7Z392 1133 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 MLKLQ8NB16 471 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 ACRBPQ8NEB7 543 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 ZNF274Q96GC6 653 aaPredicted RBP13.53□□□□□ -0.24
C9orf3-203ENST00000375315 CCDC114Q96M63 670 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 ATP6V0A2Q9Y487 856 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 PCDHAC2Q9Y5I4 1007 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 RFX7Q2KHR2 1363 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 A0A1B0GTH6 734 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 hCG_1642624A0A1W2PR95 340 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 FRMD3A2A2Y4 597 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 UBE2Q2LH0YL09 131 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 NMT2O60551 498 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 INHBEP58166 350 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 PPARAQ07869 468 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 AOC3Q16853 763 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 NBPF9Q3BBW0 867 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 RCSD1Q6JBY9 416 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.53□□□□□ -0.24
C9orf3-203ENST00000375315 KIAA1328Q86T90 577 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 SLC44A5Q8NCS7 719 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 RSRC1Q96IZ7 334 aaKnown RBP13.53□□□□□ -0.24
C9orf3-203ENST00000375315 CRAMP1Q96RY5 1269 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 ETAA1Q9NY74 926 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 GGA2Q9UJY4 613 aa13.53□□□□□ -0.24
C9orf3-203ENST00000375315 EPB41P11171 864 aaKnown RBP13.52□□□□□ -0.24
C9orf3-203ENST00000375315 METTL16Q86W50 562 aaKnown RBP13.52□□□□□ -0.24
C9orf3-203ENST00000375315 PHKBQ93100 1093 aa13.52□□□□□ -0.24
C9orf3-203ENST00000375315 RIOK1Q9BRS2 568 aaKnown RBP13.52□□□□□ -0.24
C9orf3-203ENST00000375315 MPHOSPH10O00566 681 aaKnown RBP13.52□□□□□ -0.25
C9orf3-203ENST00000375315 ZMYND10O75800 440 aa13.52□□□□□ -0.25
C9orf3-203ENST00000375315 PDIA3P30101 505 aaKnown RBP13.52□□□□□ -0.25
C9orf3-203ENST00000375315 EXOSC10Q01780 885 aaKnown RBP13.52□□□□□ -0.25
C9orf3-203ENST00000375315 NAA35Q5VZE5 725 aa13.52□□□□□ -0.25
C9orf3-203ENST00000375315 IQCEQ6IPM2 695 aa13.52□□□□□ -0.25
C9orf3-203ENST00000375315 SND1Q7KZF4 910 aaKnown RBP eCLIP13.52□□□□□ -0.25
C9orf3-203ENST00000375315 SP8Q8IXZ3 490 aa13.52□□□□□ -0.25
C9orf3-203ENST00000375315 GSPT2Q8IYD1 628 aaKnown RBP13.52□□□□□ -0.25
C9orf3-203ENST00000375315 SCLT1Q96NL6 688 aa13.52□□□□□ -0.25
C9orf3-203ENST00000375315 SAR1BQ9Y6B6 198 aa13.52□□□□□ -0.25
C9orf3-203ENST00000375315 CDC27P30260 824 aa13.51□□□□□ -0.25
C9orf3-203ENST00000375315 HOXA10P31260 410 aaPredicted RBP13.51□□□□□ -0.25
C9orf3-203ENST00000375315 WDR66Q8TBY9 1149 aa13.51□□□□□ -0.25
C9orf3-203ENST00000375315 CAGE1Q8TC20 777 aa13.51□□□□□ -0.25
C9orf3-203ENST00000375315 MMS19Q96T76 1030 aa13.51□□□□□ -0.25
C9orf3-203ENST00000375315 AGXT2Q9BYV1 514 aa13.51□□□□□ -0.25
C9orf3-203ENST00000375315 EPN3Q9H201 632 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms