RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 SLF1Q9BQI6 1058 aa21.08■□□□□ 0.96
H2AFX-201ENST00000375167 IRF2BPLQ9H1B7 796 aa21.08■□□□□ 0.96
H2AFX-201ENST00000375167 AKR1B1P15121 316 aa21.07■□□□□ 0.96
H2AFX-201ENST00000375167 EVX2Q03828 476 aa21.07■□□□□ 0.96
H2AFX-201ENST00000375167 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.07■□□□□ 0.963e-6■□□□□ 11.1
H2AFX-201ENST00000375167 PBXIP1Q96AQ6 731 aa21.07■□□□□ 0.96
H2AFX-201ENST00000375167 ZNF512BQ96KM6 892 aaPredicted RBP21.07■□□□□ 0.96
H2AFX-201ENST00000375167 CRBNQ96SW2 442 aa21.07■□□□□ 0.96
H2AFX-201ENST00000375167 DBNDD2Q9BQY9 259 aa21.07■□□□□ 0.96
H2AFX-201ENST00000375167 FBXO40Q9UH90 709 aa21.07■□□□□ 0.96
H2AFX-201ENST00000375167 CTNNA3Q9UI47 895 aa21.07■□□□□ 0.96
H2AFX-201ENST00000375167 KMT2EQ8IZD2 1858 aa21.07■□□□□ 0.96
H2AFX-201ENST00000375167 WDR5P61964 334 aaKnown RBP21.06■□□□□ 0.96
H2AFX-201ENST00000375167 TIGD5Q53EQ6 642 aa21.06■□□□□ 0.96
H2AFX-201ENST00000375167 TMED8Q6PL24 325 aaPredicted RBP21.06■□□□□ 0.96
H2AFX-201ENST00000375167 EP400NLQ6ZTU2 488 aa21.06■□□□□ 0.96
H2AFX-201ENST00000375167 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.06■□□□□ 0.96
H2AFX-201ENST00000375167 CTDP1Q9Y5B0 961 aaPredicted RBP21.06■□□□□ 0.96
H2AFX-201ENST00000375167 TRIOO75962 3097 aa21.05■□□□□ 0.96
H2AFX-201ENST00000375167 LINC01553A4QN01 128 aa21.05■□□□□ 0.96
H2AFX-201ENST00000375167 PTPROQ16827 1216 aa21.05■□□□□ 0.96
H2AFX-201ENST00000375167 CPXCR1Q8N123 301 aa21.05■□□□□ 0.96
H2AFX-201ENST00000375167 FBXO22Q8NEZ5 403 aa21.05■□□□□ 0.96
H2AFX-201ENST00000375167 EDAQ92838 391 aa21.05■□□□□ 0.96
H2AFX-201ENST00000375167 PABPC5Q96DU9 382 aaKnown RBP21.05■□□□□ 0.96
H2AFX-201ENST00000375167 MRPL38Q96DV4 380 aaKnown RBP21.05■□□□□ 0.96
H2AFX-201ENST00000375167 RAD9AQ99638 391 aa21.05■□□□□ 0.96
H2AFX-201ENST00000375167 CRNKL1Q9BZJ0 848 aaKnown RBP21.05■□□□□ 0.96
H2AFX-201ENST00000375167 CACNA1BQ00975 2339 aa21.04■□□□□ 0.96
H2AFX-201ENST00000375167 ATP2A1O14983 1001 aa21.04■□□□□ 0.96
H2AFX-201ENST00000375167 EEF2P13639 858 aaKnown RBP21.04■□□□□ 0.96
H2AFX-201ENST00000375167 SMPD1P17405 629 aa21.04■□□□□ 0.96
H2AFX-201ENST00000375167 TMCO2Q7Z6W1 182 aaPredicted RBP21.04■□□□□ 0.96
H2AFX-201ENST00000375167 ATOH1Q92858 354 aaPredicted RBP21.04■□□□□ 0.96
H2AFX-201ENST00000375167 CCDC17Q96LX7 622 aa21.04■□□□□ 0.96
H2AFX-201ENST00000375167 RIOK1Q9BRS2 568 aaKnown RBP21.04■□□□□ 0.96
H2AFX-201ENST00000375167 GPR108Q9NPR9 543 aa21.04■□□□□ 0.96
H2AFX-201ENST00000375167 Q9Y3F1 56 aa21.04■□□□□ 0.96
H2AFX-201ENST00000375167 C5orf42Q9H799 3197 aa21.04■□□□□ 0.96
H2AFX-201ENST00000375167 TMEM221A6NGB7 291 aa21.03■□□□□ 0.96
H2AFX-201ENST00000375167 M0R296 226 aa21.03■□□□□ 0.96
H2AFX-201ENST00000375167 BFSP2Q13515 415 aa21.03■□□□□ 0.96
H2AFX-201ENST00000375167 TNNI3KQ59H18 835 aa21.03■□□□□ 0.96
H2AFX-201ENST00000375167 FAM47CQ5HY64 1035 aa21.03■□□□□ 0.96
H2AFX-201ENST00000375167 CHST13Q8NET6 341 aa21.03■□□□□ 0.96
H2AFX-201ENST00000375167 SMC4Q9NTJ3 1288 aa21.03■□□□□ 0.96
H2AFX-201ENST00000375167 POLR3EQ9NVU0 708 aa21.03■□□□□ 0.96
H2AFX-201ENST00000375167 FPGT-TNNI3KV9GXZ4 949 aa21.03■□□□□ 0.96
H2AFX-201ENST00000375167 MAGEB6P1A0A0J9YX57 407 aa21.02■□□□□ 0.96
H2AFX-201ENST00000375167 ASB14A6NK59 587 aa21.02■□□□□ 0.96
H2AFX-201ENST00000375167 ZBED4O75132 1171 aa21.02■□□□□ 0.96
H2AFX-201ENST00000375167 GJB5O95377 273 aa21.02■□□□□ 0.96
H2AFX-201ENST00000375167 GNAI3P08754 354 aa21.02■□□□□ 0.96
H2AFX-201ENST00000375167 PTGS1P23219 599 aa21.02■□□□□ 0.96
H2AFX-201ENST00000375167 RNF135Q8IUD6 432 aa21.02■□□□□ 0.96
H2AFX-201ENST00000375167 DEFB103AP81534 67 aa21.01■□□□□ 0.95
H2AFX-201ENST00000375167 CNTN2Q02246 1040 aa21.01■□□□□ 0.95
H2AFX-201ENST00000375167 LRRFIP1Q32MZ4 808 aaKnown RBP21.01■□□□□ 0.95
H2AFX-201ENST00000375167 ALDH1L2Q3SY69 923 aa21.01■□□□□ 0.95
H2AFX-201ENST00000375167 TRIM67Q6ZTA4 783 aa21.01■□□□□ 0.95
H2AFX-201ENST00000375167 PRPF38AQ8NAV1 312 aaKnown RBP21.01■□□□□ 0.95
H2AFX-201ENST00000375167 DYNLL2Q96FJ2 89 aa21.01■□□□□ 0.95
H2AFX-201ENST00000375167 KANSL2Q9H9L4 492 aa21.01■□□□□ 0.95
H2AFX-201ENST00000375167 PLXNA3P51805 1871 aa21■□□□□ 0.95
H2AFX-201ENST00000375167 CYP2D6P10635 497 aa21■□□□□ 0.95
H2AFX-201ENST00000375167 IQSEC1Q6DN90 963 aa21■□□□□ 0.95
H2AFX-201ENST00000375167 FBXL6Q8N531 539 aa21■□□□□ 0.95
H2AFX-201ENST00000375167 BANK1Q8NDB2 785 aa21■□□□□ 0.95
H2AFX-201ENST00000375167 RAVER2Q9HCJ3 691 aaKnown RBP21■□□□□ 0.95
H2AFX-201ENST00000375167 FAM186AA6NE01 2351 aa21■□□□□ 0.95
H2AFX-201ENST00000375167 RIF1Q5UIP0 2472 aaKnown RBP20.99■□□□□ 0.95
H2AFX-201ENST00000375167 SMAD2Q15796 467 aaKnown RBP20.99■□□□□ 0.95
H2AFX-201ENST00000375167 CCDC155Q8N6L0 562 aa20.99■□□□□ 0.95
H2AFX-201ENST00000375167 FAM133AQ8N9E0 248 aa20.99■□□□□ 0.95
H2AFX-201ENST00000375167 NUP88Q99567 741 aaPredicted RBP20.99■□□□□ 0.95
H2AFX-201ENST00000375167 GPHNQ9NQX3 736 aaPredicted RBP20.99■□□□□ 0.95
H2AFX-201ENST00000375167 NOD1Q9Y239 953 aa20.99■□□□□ 0.95
H2AFX-201ENST00000375167 SCN10AQ9Y5Y9 1956 aa20.99■□□□□ 0.95
H2AFX-201ENST00000375167 ID4P47928 161 aa20.98■□□□□ 0.95
H2AFX-201ENST00000375167 PURAQ00577 322 aaKnown RBP20.98■□□□□ 0.95
H2AFX-201ENST00000375167 COL19A1Q14993 1142 aa20.98■□□□□ 0.95
H2AFX-201ENST00000375167 TCEAL5Q5H9L2 206 aa20.98■□□□□ 0.95
H2AFX-201ENST00000375167 C17orf80Q9BSJ5 609 aa20.98■□□□□ 0.95
H2AFX-201ENST00000375167 API5Q9BZZ5 524 aaKnown RBP20.98■□□□□ 0.95
H2AFX-201ENST00000375167 DCP1AQ9NPI6 582 aaPredicted RBP20.98■□□□□ 0.95
H2AFX-201ENST00000375167 CLDND1Q9NY35 253 aa20.98■□□□□ 0.95
H2AFX-201ENST00000375167 TRIP12Q14669 1992 aaPredicted RBP20.98■□□□□ 0.95
H2AFX-201ENST00000375167 MYL3P08590 195 aa20.97■□□□□ 0.95
H2AFX-201ENST00000375167 CNKSR3Q6P9H4 555 aa20.97■□□□□ 0.95
H2AFX-201ENST00000375167 FBXO16Q8IX29 292 aaPredicted RBP20.97■□□□□ 0.95
H2AFX-201ENST00000375167 SDR42E1Q8WUS8 393 aa20.97■□□□□ 0.95
H2AFX-201ENST00000375167 MTG1Q9BT17 334 aaPredicted RBP20.97■□□□□ 0.95
H2AFX-201ENST00000375167 PDGFCQ9NRA1 345 aa20.97■□□□□ 0.95
H2AFX-201ENST00000375167 HOMER2Q9NSB8 354 aa20.97■□□□□ 0.95
H2AFX-201ENST00000375167 USP17L12C9JPN9 530 aa20.97■□□□□ 0.95
H2AFX-201ENST00000375167 USP17L21D6R901 530 aa20.97■□□□□ 0.95
H2AFX-201ENST00000375167 CPT1AP50416 773 aa20.97■□□□□ 0.95
H2AFX-201ENST00000375167 OS9Q13438 667 aaPredicted RBP20.97■□□□□ 0.95
H2AFX-201ENST00000375167 NFRKBQ6P4R8 1299 aa20.97■□□□□ 0.95
H2AFX-201ENST00000375167 NSUN3Q9H649 340 aaKnown RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms