RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 PTPROQ16827 1216 aa11.31□□□□□ -0.6
HLA-DOA-202ENST00000374813 LRRFIP1Q32MZ4 808 aaKnown RBP11.31□□□□□ -0.6
HLA-DOA-202ENST00000374813 FAM83BQ5T0W9 1011 aa11.31□□□□□ -0.6
HLA-DOA-202ENST00000374813 ERMP1Q7Z2K6 904 aa11.31□□□□□ -0.6
HLA-DOA-202ENST00000374813 ADHFE1Q8IWW8 467 aa11.31□□□□□ -0.6
HLA-DOA-202ENST00000374813 RAD9AQ99638 391 aa11.31□□□□□ -0.6
HLA-DOA-202ENST00000374813 RIOK1Q9BRS2 568 aaKnown RBP11.31□□□□□ -0.6
HLA-DOA-202ENST00000374813 MRS2Q9HD23 443 aa11.31□□□□□ -0.6
HLA-DOA-202ENST00000374813 TRMT13Q9NUP7 481 aaKnown RBP11.31□□□□□ -0.6
HLA-DOA-202ENST00000374813 WDR87Q6ZQQ6 2873 aa11.3□□□□□ -0.6
HLA-DOA-202ENST00000374813 TET1Q8NFU7 2136 aa11.3□□□□□ -0.6
HLA-DOA-202ENST00000374813 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.3□□□□□ -0.6
HLA-DOA-202ENST00000374813 USP17L12C9JPN9 530 aa11.3□□□□□ -0.6
HLA-DOA-202ENST00000374813 USP17L21D6R901 530 aa11.3□□□□□ -0.6
HLA-DOA-202ENST00000374813 AKR1B1P15121 316 aa11.3□□□□□ -0.6
HLA-DOA-202ENST00000374813 HERC4Q5GLZ8 1057 aaPredicted RBP11.3□□□□□ -0.6
HLA-DOA-202ENST00000374813 CPXCR1Q8N123 301 aa11.3□□□□□ -0.6
HLA-DOA-202ENST00000374813 PRSS33Q8NF86 280 aa11.3□□□□□ -0.6
HLA-DOA-202ENST00000374813 POP1Q99575 1024 aaKnown RBP11.3□□□□□ -0.6
HLA-DOA-202ENST00000374813 GPHNQ9NQX3 736 aaPredicted RBP11.3□□□□□ -0.6
HLA-DOA-202ENST00000374813 POLR3EQ9NVU0 708 aa11.3□□□□□ -0.6
HLA-DOA-202ENST00000374813 NOB1Q9ULX3 412 aaKnown RBP11.3□□□□□ -0.6
HLA-DOA-202ENST00000374813 VPS13AQ96RL7 3174 aa11.3□□□□□ -0.6
HLA-DOA-202ENST00000374813 TECTAO75443 2155 aa11.3□□□□□ -0.6
HLA-DOA-202ENST00000374813 FAM186AA6NE01 2351 aa11.3□□□□□ -0.6
HLA-DOA-202ENST00000374813 LCHNA4D1U4 455 aa11.29□□□□□ -0.6
HLA-DOA-202ENST00000374813 E9PSI1 815 aa11.29□□□□□ -0.6
HLA-DOA-202ENST00000374813 H3BQ06 376 aaPredicted RBP11.29□□□□□ -0.6
HLA-DOA-202ENST00000374813 NCK2O43639 380 aa11.29□□□□□ -0.6
HLA-DOA-202ENST00000374813 GNAI2P04899 355 aa11.29□□□□□ -0.6
HLA-DOA-202ENST00000374813 SMPD1P17405 629 aa11.29□□□□□ -0.6
HLA-DOA-202ENST00000374813 OAZ1P54368 228 aa11.29□□□□□ -0.6
HLA-DOA-202ENST00000374813 SPRED2Q7Z698 418 aa11.29□□□□□ -0.6
HLA-DOA-202ENST00000374813 CLEC10AQ8IUN9 316 aa11.29□□□□□ -0.6
HLA-DOA-202ENST00000374813 SUGP1Q8IWZ8 645 aaKnown RBP11.29□□□□□ -0.6
HLA-DOA-202ENST00000374813 AMOTL1Q8IY63 956 aa11.29□□□□□ -0.6
HLA-DOA-202ENST00000374813 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.29□□□□□ -0.6
HLA-DOA-202ENST00000374813 EDAQ92838 391 aa11.29□□□□□ -0.6
HLA-DOA-202ENST00000374813 PBXIP1Q96AQ6 731 aa11.29□□□□□ -0.6
HLA-DOA-202ENST00000374813 FGD4Q96M96 766 aa11.29□□□□□ -0.6
HLA-DOA-202ENST00000374813 CRBNQ96SW2 442 aa11.29□□□□□ -0.6
HLA-DOA-202ENST00000374813 DCP1AQ9NPI6 582 aaPredicted RBP11.29□□□□□ -0.6
HLA-DOA-202ENST00000374813 MTUS1Q9ULD2 1270 aa11.29□□□□□ -0.6
HLA-DOA-202ENST00000374813 TRIP12Q14669 1992 aaPredicted RBP11.28□□□□□ -0.6
HLA-DOA-202ENST00000374813 COL4A4P53420 1690 aaPredicted RBP11.28□□□□□ -0.6
HLA-DOA-202ENST00000374813 EFCAB14O75071 495 aa11.28□□□□□ -0.6
HLA-DOA-202ENST00000374813 GJB5O95377 273 aa11.28□□□□□ -0.6
HLA-DOA-202ENST00000374813 PARNO95453 639 aaKnown RBP11.28□□□□□ -0.6
HLA-DOA-202ENST00000374813 WDR5P61964 334 aaKnown RBP11.28□□□□□ -0.6
HLA-DOA-202ENST00000374813 OS9Q13438 667 aaPredicted RBP11.28□□□□□ -0.6
HLA-DOA-202ENST00000374813 BRDTQ58F21 947 aaPredicted RBP11.28□□□□□ -0.6
HLA-DOA-202ENST00000374813 NFRKBQ6P4R8 1299 aa11.28□□□□□ -0.6
HLA-DOA-202ENST00000374813 CCDC155Q8N6L0 562 aa11.28□□□□□ -0.6
HLA-DOA-202ENST00000374813 FAM133AQ8N9E0 248 aa11.28□□□□□ -0.6
HLA-DOA-202ENST00000374813 ANKS1AQ92625 1134 aa11.28□□□□□ -0.6
HLA-DOA-202ENST00000374813 PABPC5Q96DU9 382 aaKnown RBP11.28□□□□□ -0.6
HLA-DOA-202ENST00000374813 MRPL38Q96DV4 380 aaKnown RBP11.28□□□□□ -0.6
HLA-DOA-202ENST00000374813 DYNLL2Q96FJ2 89 aa11.28□□□□□ -0.6
HLA-DOA-202ENST00000374813 SLC38A10Q9HBR0 1119 aa11.28□□□□□ -0.6
HLA-DOA-202ENST00000374813 COG6Q9Y2V7 657 aa11.28□□□□□ -0.6
HLA-DOA-202ENST00000374813 CACNA1BQ00975 2339 aa11.27□□□□□ -0.6
HLA-DOA-202ENST00000374813 LINC01553A4QN01 128 aa11.27□□□□□ -0.61
HLA-DOA-202ENST00000374813 FDX1P10109 184 aa11.27□□□□□ -0.61
HLA-DOA-202ENST00000374813 IRS1P35568 1242 aa11.27□□□□□ -0.61
HLA-DOA-202ENST00000374813 CDK8P49336 464 aa11.27□□□□□ -0.61
HLA-DOA-202ENST00000374813 CPT1AP50416 773 aa11.27□□□□□ -0.61
HLA-DOA-202ENST00000374813 CNTN2Q02246 1040 aa11.27□□□□□ -0.61
HLA-DOA-202ENST00000374813 EVX2Q03828 476 aa11.27□□□□□ -0.61
HLA-DOA-202ENST00000374813 PTPN11Q06124 597 aaPredicted RBP11.27□□□□□ -0.61
HLA-DOA-202ENST00000374813 TTF1Q15361 905 aaPredicted RBP11.27□□□□□ -0.61
HLA-DOA-202ENST00000374813 TIGD5Q53EQ6 642 aa11.27□□□□□ -0.61
HLA-DOA-202ENST00000374813 IER5LQ5T953 404 aa11.27□□□□□ -0.61
HLA-DOA-202ENST00000374813 FBXO22Q8NEZ5 403 aa11.27□□□□□ -0.61
HLA-DOA-202ENST00000374813 MTG1Q9BT17 334 aaPredicted RBP11.27□□□□□ -0.61
HLA-DOA-202ENST00000374813 RAVER2Q9HCJ3 691 aaKnown RBP11.27□□□□□ -0.61
HLA-DOA-202ENST00000374813 ATP8A2Q9NTI2 1148 aa11.27□□□□□ -0.61
HLA-DOA-202ENST00000374813 NOD1Q9Y239 953 aa11.27□□□□□ -0.61
HLA-DOA-202ENST00000374813 INSL6Q9Y581 213 aa11.27□□□□□ -0.61
HLA-DOA-202ENST00000374813 NAV1Q8NEY1 1877 aa11.27□□□□□ -0.61
HLA-DOA-202ENST00000374813 SIP14410 1827 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 PNMA6EA0A0J9YXQ4 647 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 ABHD14A-ACY1A0A1B0GW23 586 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 F5H6K3 240 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 KPNA6O60684 536 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 PURAQ00577 322 aaKnown RBP11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 KLRC3Q07444 240 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 TCF15Q12870 199 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 DUSP28Q4G0W2 176 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 FAM47CQ5HY64 1035 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 SLC9C2Q5TAH2 1124 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 TAPT1Q6NXT6 567 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 EP400NLQ6ZTU2 488 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 KIAA1211Q6ZU35 1233 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 BANK1Q8NDB2 785 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 CAGE1Q8TC20 777 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 SDR42E1Q8WUS8 393 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 DDRGK1Q96HY6 314 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 ACAD9Q9H845 621 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 MUTYHQ9UIF7 546 aa11.26□□□□□ -0.61
HLA-DOA-202ENST00000374813 DBNLQ9UJU6 430 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms