RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 CYP26C1Q6V0L0 522 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 SPATA5Q8NB90 893 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 GPRC5AQ8NFJ5 357 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 GDPD2Q9HCC8 539 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 UTP11Q9Y3A2 253 aaKnown RBP6.94□□□□□ -1.3
PTPN3-202ENST00000374541 ELP1O95163 1332 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 GIPC1O14908 333 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 COPB2P35606 906 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 NUCB1Q02818 461 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 HSP90AA5PQ58FG0 334 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 PGBD3Q8N328 593 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 MAK16Q9BXY0 300 aaKnown RBP6.94□□□□□ -1.3
PTPN3-202ENST00000374541 FBXO40Q9UH90 709 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 CEP152O94986 1710 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 IRS2Q9Y4H2 1338 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 ADCY9O60503 1353 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 PQBP1O60828 265 aaKnown RBP6.94□□□□□ -1.3
PTPN3-202ENST00000374541 ATXN3P54252 364 aaPredicted RBP6.94□□□□□ -1.3
PTPN3-202ENST00000374541 NONOQ15233 471 aaKnown RBP eCLIP6.94□□□□□ -1.3
PTPN3-202ENST00000374541 SYCE1Q8N0S2 351 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 CABS1Q96KC9 395 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 GBP5Q96PP8 586 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 AFMP43652 599 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 PLCD1P51178 756 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 SYT10Q6XYQ8 523 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 P3H4Q92791 437 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 APOL6Q9BWW8 343 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 NUCKS1Q9H1E3 243 aaKnown RBP6.93□□□□□ -1.3
PTPN3-202ENST00000374541 DEFB129Q9H1M3 183 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 MYOM1P52179 1685 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 RNF40O75150 1001 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 ZNF697Q5TEC3 545 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 GLT8D2Q9H1C3 349 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 CACYBPQ9HB71 228 aaKnown RBP6.93□□□□□ -1.3
PTPN3-202ENST00000374541 CLTCL1P53675 1640 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 HEG1Q9ULI3 1381 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 FARP2O94887 1054 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-202ENST00000374541 TRIM27P14373 513 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 KRT2P35908 639 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 MAP2K2P36507 400 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 TBC1D31Q96DN5 1066 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 PANK2Q9BZ23 570 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 PFDN4Q9NQP4 134 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 CYP27B1O15528 508 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 GPSM2P81274 684 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 XAGE2Q96GT9 111 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 EPSTI1Q96J88 318 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 NOX5Q96PH1 765 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 ADPGKQ9BRR6 497 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 STARD7Q9NQZ5 370 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 PAG1Q9NWQ8 432 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 SCAF8Q9UPN6 1271 aaKnown RBP6.93□□□□□ -1.3
PTPN3-202ENST00000374541 NUB1Q9Y5A7 615 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 EIF2AK4Q9P2K8 1649 aaKnown RBP6.93□□□□□ -1.3
PTPN3-202ENST00000374541 SRCAPQ6ZRS2 3230 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 LRRC7Q96NW7 1537 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 RHOXF2BP0C7M4 288 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 PKN2Q16513 984 aaKnown RBP6.93□□□□□ -1.3
PTPN3-202ENST00000374541 MCMDC2Q4G0Z9 681 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 HHATQ5VTY9 493 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 MIER3Q7Z3K6 550 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 TRMT44Q8IYL2 757 aaKnown RBP6.93□□□□□ -1.3
PTPN3-202ENST00000374541 ZFP91Q96JP5 570 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-202ENST00000374541 YME1L1Q96TA2 773 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 RHOXF2Q9BQY4 288 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 ESYT1Q9BSJ8 1104 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 SUDS3Q9H7L9 328 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-202ENST00000374541 SUGCTQ9HAC7 445 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 AAASQ9NRG9 546 aa6.93□□□□□ -1.3
PTPN3-202ENST00000374541 SPHKAPQ2M3C7 1700 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 NBPF26B4DH59 902 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 TMEM232C9JQI7 657 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 YARSP54577 528 aaKnown RBP6.92□□□□□ -1.3
PTPN3-202ENST00000374541 SATB1Q01826 763 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 APBA1Q02410 837 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 ITIH3Q06033 890 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 TMTC1Q8IUR5 882 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 CCDC65Q8IXS2 484 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 ANKRD13CQ8N6S4 541 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 PROCA1Q8NCQ7 364 aaPredicted RBP6.92□□□□□ -1.3
PTPN3-202ENST00000374541 URGCPQ8TCY9 931 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 CAPZA3Q96KX2 299 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 PPP1R12CQ9BZL4 782 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 ARMT1Q9H993 441 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 SLC28A3Q9HAS3 691 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 PA2G4Q9UQ80 394 aaKnown RBP6.92□□□□□ -1.3
PTPN3-202ENST00000374541 PRR36Q9H6K5 1346 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 CPSF1Q10570 1443 aaKnown RBP6.92□□□□□ -1.3
PTPN3-202ENST00000374541 FAM160A1Q05DH4 1040 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 STRN3Q13033 797 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 RHPN1Q8TCX5 695 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 OPTNQ96CV9 577 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 GREM2Q9H772 168 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 SYNMO15061 1565 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 GOLGA6BA6NDN3 693 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 USP17L15C9J2P7 530 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 USP17L13C9JLJ4 530 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 USP17L11C9JVI0 530 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 USP17L18D6R9N7 530 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 USP17L22D6RA61 530 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms