RNA–Protein interactions for RNA: ENST00000374461.1

SVEP1-201, Transcript of sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SVEP1, Length 3,257 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVEP1-201ENST00000374461 EEF2KMTQ96G04 330 aa13.62□□□□□ -0.23
SVEP1-201ENST00000374461 RNF216Q9NWF9 866 aaPredicted RBP13.62□□□□□ -0.23
SVEP1-201ENST00000374461 PCDHA6Q9UN73 950 aa13.62□□□□□ -0.23
SVEP1-201ENST00000374461 PCDHA8Q9Y5H6 950 aa13.62□□□□□ -0.23
SVEP1-201ENST00000374461 LAMB1P07942 1786 aa13.62□□□□□ -0.23
SVEP1-201ENST00000374461 H7C1D1 291 aa13.62□□□□□ -0.23
SVEP1-201ENST00000374461 CCNT1O60563 726 aaKnown RBP13.62□□□□□ -0.23
SVEP1-201ENST00000374461 PPP6R2O75170 966 aa13.62□□□□□ -0.23
SVEP1-201ENST00000374461 TERF1P54274 439 aa13.62□□□□□ -0.23
SVEP1-201ENST00000374461 DHX58Q96C10 678 aa13.62□□□□□ -0.23
SVEP1-201ENST00000374461 NAT10Q9H0A0 1025 aaKnown RBP13.62□□□□□ -0.23
SVEP1-201ENST00000374461 TPM3P06753 285 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 KARSQ15046 597 aaKnown RBP13.61□□□□□ -0.23
SVEP1-201ENST00000374461 KIF4BQ2VIQ3 1234 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 ANGEL2Q5VTE6 544 aaKnown RBP13.61□□□□□ -0.23
SVEP1-201ENST00000374461 REXO1Q8N1G1 1221 aaKnown RBP13.61□□□□□ -0.23
SVEP1-201ENST00000374461 DEFB129Q9H1M3 183 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 CNTNAP1P78357 1384 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 DDNO94850 711 aaPredicted RBP13.61□□□□□ -0.23
SVEP1-201ENST00000374461 GNA11P29992 359 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 AFMP43652 599 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 GPATCH4Q5T3I0 446 aaKnown RBP13.61□□□□□ -0.23
SVEP1-201ENST00000374461 CCDC12Q8WUD4 166 aaPredicted RBP13.61□□□□□ -0.23
SVEP1-201ENST00000374461 KIFC2Q96AC6 838 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 HERC5Q9UII4 1024 aaKnown RBP13.61□□□□□ -0.23
SVEP1-201ENST00000374461 FBXO2Q9UK22 296 aaPredicted RBP13.61□□□□□ -0.23
SVEP1-201ENST00000374461 PCDHA1Q9Y5I3 950 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 USP17L15C9J2P7 530 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 USP17L13C9JLJ4 530 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 USP17L11C9JVI0 530 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 USP17L18D6R9N7 530 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 USP17L22D6RA61 530 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 USP17L17D6RBQ6 530 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 USP17L19D6RCP7 530 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 USP17L20D6RJB6 530 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 CUTAO60888 179 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 EPS15P42566 896 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 NT5C2P49902 561 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 USP17L24Q0WX57 530 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 USP17L6PQ6QN14 398 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 MNS1Q8NEH6 495 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 SPTLC3Q9NUV7 552 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 ZBTB21Q9ULJ3 1066 aa13.61□□□□□ -0.23
SVEP1-201ENST00000374461 PTPREP23469 700 aa13.6□□□□□ -0.23
SVEP1-201ENST00000374461 FAM83BQ5T0W9 1011 aa13.6□□□□□ -0.23
SVEP1-201ENST00000374461 NBPF12Q5TAG4 269 aaPredicted RBP13.6□□□□□ -0.23
SVEP1-201ENST00000374461 KIF18AQ8NI77 898 aa13.6□□□□□ -0.23
SVEP1-201ENST00000374461 TBCKQ8TEA7 893 aa13.6□□□□□ -0.23
SVEP1-201ENST00000374461 DESI2Q9BSY9 194 aa13.6□□□□□ -0.23
SVEP1-201ENST00000374461 RIOX1Q9H6W3 641 aa13.6□□□□□ -0.23
SVEP1-201ENST00000374461 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.6□□□□□ -0.23
SVEP1-201ENST00000374461 RNF181Q9P0P0 153 aa13.6□□□□□ -0.23
SVEP1-201ENST00000374461 CDK5RAP2Q96SN8 1893 aa13.6□□□□□ -0.23
SVEP1-201ENST00000374461 PPP1R11O60927 126 aaPredicted RBP13.6□□□□□ -0.23
SVEP1-201ENST00000374461 TPM4P67936 248 aa13.6□□□□□ -0.23
SVEP1-201ENST00000374461 CDC37Q16543 378 aaPredicted RBP13.6□□□□□ -0.23
SVEP1-201ENST00000374461 QRICH1Q2TAL8 776 aa13.6□□□□□ -0.23
SVEP1-201ENST00000374461 CCDC174Q6PII3 467 aa13.6□□□□□ -0.23
SVEP1-201ENST00000374461 TRPM4Q8TD43 1214 aa13.6□□□□□ -0.23
SVEP1-201ENST00000374461 SYMPKQ92797 1274 aaKnown RBP13.6□□□□□ -0.23
SVEP1-201ENST00000374461 TNFRSF25Q93038 417 aa13.6□□□□□ -0.23
SVEP1-201ENST00000374461 VPS33BQ9H267 617 aa13.6□□□□□ -0.23
SVEP1-201ENST00000374461 NYAP2Q9P242 653 aa13.6□□□□□ -0.23
SVEP1-201ENST00000374461 NRDCO43847 1150 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 BMP3P12645 472 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 ADCY7P51828 1080 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 UBASH3AP57075 661 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 HINFPQ9BQA5 517 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 SYT17Q9BSW7 474 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 ARHGEF10LQ9HCE6 1279 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 PP2D1A8MPX8 630 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 ZBTB5O15062 677 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 ADKP55263 362 aaKnown RBP13.59□□□□□ -0.23
SVEP1-201ENST00000374461 IQCB1Q15051 598 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 KIAA1755Q5JYT7 1200 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 RESP18Q5W5W9 173 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 PLA2G4DQ86XP0 818 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 DPF2Q92785 391 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 GJA10Q969M2 543 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 CCDC34Q96HJ3 373 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 ZNF341Q9BYN7 854 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 FBXO28Q9NVF7 368 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 SERTAD1Q9UHV2 236 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 PNMA6FA0A0J9YX94 578 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 SMTNL1A8MU46 457 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 MARCH6O60337 910 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 SNHG28P0DPA3 235 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 TEX35Q5T0J7 233 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 DHX40Q8IX18 779 aaKnown RBP13.59□□□□□ -0.23
SVEP1-201ENST00000374461 ZMYND12Q9H0C1 365 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 TMEM60Q9H2L4 133 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 PSTPIP2Q9H939 334 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 MAPK8IP1Q9UQF2 711 aa13.59□□□□□ -0.23
SVEP1-201ENST00000374461 SRPRBQ9Y5M8 271 aaKnown RBP13.59□□□□□ -0.23
SVEP1-201ENST00000374461 PLIN4Q96Q06 1357 aa13.58□□□□□ -0.23
SVEP1-201ENST00000374461 FZD9O00144 591 aa13.58□□□□□ -0.24
SVEP1-201ENST00000374461 ZSCAN20P17040 1043 aaPredicted RBP13.58□□□□□ -0.24
SVEP1-201ENST00000374461 INPP5BP32019 993 aa13.58□□□□□ -0.24
SVEP1-201ENST00000374461 TNFAIP1Q13829 316 aa13.58□□□□□ -0.24
SVEP1-201ENST00000374461 NONOQ15233 471 aaKnown RBP eCLIP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms