RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 STK4Q13043 487 aa26.78■■□□□ 1.88
CDK9-201ENST00000373264 SOGA3Q5TF21 947 aa26.78■■□□□ 1.88
CDK9-201ENST00000373264 PROM2Q8N271 834 aa26.78■■□□□ 1.88
CDK9-201ENST00000373264 ITIH6Q6UXX5 1313 aa26.78■■□□□ 1.88
CDK9-201ENST00000373264 SLC37A4O43826 429 aa26.78■■□□□ 1.88
CDK9-201ENST00000373264 SHROOM1Q2M3G4 852 aaPredicted RBP26.78■■□□□ 1.88
CDK9-201ENST00000373264 TTBK2Q6IQ55 1244 aa26.78■■□□□ 1.88
CDK9-201ENST00000373264 CNGA4Q8IV77 575 aa26.78■■□□□ 1.88
CDK9-201ENST00000373264 KCNQ5Q9NR82 932 aa26.78■■□□□ 1.88
CDK9-201ENST00000373264 PCDHAC2Q9Y5I4 1007 aa26.78■■□□□ 1.88
CDK9-201ENST00000373264 GOLGA6L9A6NEM1 432 aa26.77■■□□□ 1.88
CDK9-201ENST00000373264 ONECUT3O60422 494 aaPredicted RBP26.77■■□□□ 1.88
CDK9-201ENST00000373264 TDP2O95551 362 aa26.77■■□□□ 1.88
CDK9-201ENST00000373264 REXO1Q8N1G1 1221 aaKnown RBP26.77■■□□□ 1.88
CDK9-201ENST00000373264 GIMAP8Q8ND71 665 aaPredicted RBP26.77■■□□□ 1.88
CDK9-201ENST00000373264 TRIM47Q96LD4 638 aa26.77■■□□□ 1.88
CDK9-201ENST00000373264 RHOBTB3O94955 611 aa26.77■■□□□ 1.88
CDK9-201ENST00000373264 KRT9P35527 623 aa26.77■■□□□ 1.88
CDK9-201ENST00000373264 PRPHP41219 470 aa26.77■■□□□ 1.88
CDK9-201ENST00000373264 TRIM9Q9C026 710 aa26.77■■□□□ 1.88
CDK9-201ENST00000373264 TTF2Q9UNY4 1162 aaKnown RBP26.77■■□□□ 1.88
CDK9-201ENST00000373264 TFR2Q9UP52 801 aa26.77■■□□□ 1.88
CDK9-201ENST00000373264 SEC31AO94979 1220 aaKnown RBP26.76■■□□□ 1.87
CDK9-201ENST00000373264 SLC16A2P36021 539 aa26.76■■□□□ 1.87
CDK9-201ENST00000373264 KLK7P49862 253 aa26.76■■□□□ 1.87
CDK9-201ENST00000373264 PPP2R3AQ06190 1150 aa26.76■■□□□ 1.87
CDK9-201ENST00000373264 GABPAQ06546 454 aa26.76■■□□□ 1.87
CDK9-201ENST00000373264 TTI2Q6NXR4 508 aa26.76■■□□□ 1.87
CDK9-201ENST00000373264 TBC1D22AQ8WUA7 517 aa26.76■■□□□ 1.87
CDK9-201ENST00000373264 DUSP9Q99956 384 aaKnown RBP26.76■■□□□ 1.87
CDK9-201ENST00000373264 RIOX1Q9H6W3 641 aa26.76■■□□□ 1.87
CDK9-201ENST00000373264 GNA11P29992 359 aa26.76■■□□□ 1.87
CDK9-201ENST00000373264 SLF1Q9BQI6 1058 aa26.76■■□□□ 1.87
CDK9-201ENST00000373264 TTC26A0AVF1 554 aa26.75■■□□□ 1.87
CDK9-201ENST00000373264 H7C1D1 291 aa26.75■■□□□ 1.87
CDK9-201ENST00000373264 PPP1R11O60927 126 aaPredicted RBP26.75■■□□□ 1.87
CDK9-201ENST00000373264 NOVP48745 357 aa26.75■■□□□ 1.87
CDK9-201ENST00000373264 ASIC1P78348 528 aa26.75■■□□□ 1.87
CDK9-201ENST00000373264 PDE4DQ08499 809 aa26.75■■□□□ 1.87
CDK9-201ENST00000373264 KCNB1Q14721 858 aa26.75■■□□□ 1.87
CDK9-201ENST00000373264 UBE2SQ16763 222 aa26.75■■□□□ 1.87
CDK9-201ENST00000373264 TEX35Q5T0J7 233 aa26.75■■□□□ 1.87
CDK9-201ENST00000373264 ZFPM1Q8IX07 1006 aa26.75■■□□□ 1.87
CDK9-201ENST00000373264 CRAMP1Q96RY5 1269 aa26.75■■□□□ 1.87
CDK9-201ENST00000373264 NAA15Q9BXJ9 866 aaKnown RBP26.75■■□□□ 1.87
CDK9-201ENST00000373264 FAM196BA6NMK8 535 aa26.75■■□□□ 1.87
CDK9-201ENST00000373264 LAD1O00515 517 aa26.75■■□□□ 1.87
CDK9-201ENST00000373264 NT5C2P49902 561 aa26.75■■□□□ 1.87
CDK9-201ENST00000373264 ATP2B2Q01814 1243 aa26.75■■□□□ 1.87
CDK9-201ENST00000373264 SPAG1Q07617 926 aa26.75■■□□□ 1.87
CDK9-201ENST00000373264 ZNF569Q5MCW4 686 aa26.75■■□□□ 1.87
CDK9-201ENST00000373264 NUDT12Q9BQG2 462 aa26.75■■□□□ 1.87
CDK9-201ENST00000373264 TRIM10Q9UDY6 481 aa26.75■■□□□ 1.87
CDK9-201ENST00000373264 LTBP1Q14766 1721 aa26.74■■□□□ 1.87
CDK9-201ENST00000373264 B4DLN1 442 aa26.74■■□□□ 1.87
CDK9-201ENST00000373264 CACNB3P54284 484 aa26.74■■□□□ 1.87
CDK9-201ENST00000373264 NFIAQ12857 509 aa26.74■■□□□ 1.87
CDK9-201ENST00000373264 ANKRD40Q6AI12 368 aa26.74■■□□□ 1.87
CDK9-201ENST00000373264 USP40Q9NVE5 1235 aa26.74■■□□□ 1.87
CDK9-201ENST00000373264 POTEMA6NI47 508 aa26.74■■□□□ 1.87
CDK9-201ENST00000373264 MB21D1Q8N884 522 aa26.74■■□□□ 1.87
CDK9-201ENST00000373264 EFCAB8A8MWE9 144 aa26.73■■□□□ 1.87
CDK9-201ENST00000373264 FECHP22830 423 aa26.73■■□□□ 1.87
CDK9-201ENST00000373264 SLF2Q8IX21 1173 aa26.73■■□□□ 1.87
CDK9-201ENST00000373264 ANKRD20A12PQ8NF67 263 aa26.73■■□□□ 1.87
CDK9-201ENST00000373264 CERS3Q8IU89 383 aa26.73■■□□□ 1.87
CDK9-201ENST00000373264 ZNF507Q8TCN5 953 aa26.73■■□□□ 1.87
CDK9-201ENST00000373264 PSMA7O14818 248 aa26.72■■□□□ 1.87
CDK9-201ENST00000373264 KCTD1Q719H9 257 aa26.72■■□□□ 1.87
CDK9-201ENST00000373264 SP8Q8IXZ3 490 aa26.72■■□□□ 1.87
CDK9-201ENST00000373264 CSGALNACT2Q8N6G5 542 aa26.72■■□□□ 1.87
CDK9-201ENST00000373264 REXO2Q9Y3B8 237 aaKnown RBP26.72■■□□□ 1.87
CDK9-201ENST00000373264 FHOD1Q9Y613 1164 aa26.72■■□□□ 1.87
CDK9-201ENST00000373264 FOCADQ5VW36 1801 aa26.72■■□□□ 1.87
CDK9-201ENST00000373264 KLRG2A4D1S0 409 aaPredicted RBP26.72■■□□□ 1.87
CDK9-201ENST00000373264 TPM1P09493 284 aa26.72■■□□□ 1.87
CDK9-201ENST00000373264 GRB10Q13322 594 aa26.72■■□□□ 1.87
CDK9-201ENST00000373264 SLC35F6Q8N357 371 aa26.72■■□□□ 1.87
CDK9-201ENST00000373264 JMJD4Q9H9V9 463 aa26.72■■□□□ 1.87
CDK9-201ENST00000373264 SLC39A2Q9NP94 309 aa26.72■■□□□ 1.87
CDK9-201ENST00000373264 PUF60Q9UHX1 559 aaKnown RBP26.72■■□□□ 1.87
CDK9-201ENST00000373264 ATP6V0A2Q9Y487 856 aa26.72■■□□□ 1.87
CDK9-201ENST00000373264 LGALS16A8MUM7 142 aa26.71■■□□□ 1.87
CDK9-201ENST00000373264 SHMT1P34896 483 aa26.71■■□□□ 1.87
CDK9-201ENST00000373264 HSPA1LP34931 641 aa26.71■■□□□ 1.87
CDK9-201ENST00000373264 ARHGAP25P42331 645 aa26.71■■□□□ 1.87
CDK9-201ENST00000373264 MCM6Q14566 821 aa26.71■■□□□ 1.87
CDK9-201ENST00000373264 ADGRF4Q8IZF3 695 aa26.71■■□□□ 1.87
CDK9-201ENST00000373264 KIAA0895Q8NCT3 520 aa26.71■■□□□ 1.87
CDK9-201ENST00000373264 MTMR9Q96QG7 549 aa26.71■■□□□ 1.87
CDK9-201ENST00000373264 FAM53CQ9NYF3 392 aa26.71■■□□□ 1.87
CDK9-201ENST00000373264 IGKV6D-41A0A0C4DH26 115 aa26.71■■□□□ 1.87
CDK9-201ENST00000373264 MPHOSPH10O00566 681 aaKnown RBP26.71■■□□□ 1.87
CDK9-201ENST00000373264 ERCC3P19447 782 aa26.71■■□□□ 1.87
CDK9-201ENST00000373264 TNNI2P48788 182 aa26.71■■□□□ 1.87
CDK9-201ENST00000373264 DYMQ7RTS9 669 aa26.71■■□□□ 1.87
CDK9-201ENST00000373264 AK8Q96MA6 479 aa26.71■■□□□ 1.87
CDK9-201ENST00000373264 PNMA5Q96PV4 448 aa26.71■■□□□ 1.87
CDK9-201ENST00000373264 ZC3H12CQ9C0D7 883 aaKnown RBP26.71■■□□□ 1.87
CDK9-201ENST00000373264 BLOC1S4Q9NUP1 217 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms