RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 BAG2O95816 211 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 FOSP01100 380 aaPredicted RBP12.61□□□□□ -0.39
VCL-202ENST00000372755 RPN1P04843 607 aaKnown RBP12.61□□□□□ -0.39
VCL-202ENST00000372755 PCP11498 1178 aaKnown RBP12.61□□□□□ -0.39
VCL-202ENST00000372755 PIK3CAP42336 1068 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 POLGP54098 1239 aaPredicted RBP12.61□□□□□ -0.39
VCL-202ENST00000372755 MMEL1Q495T6 779 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 CERKLQ49MI3 558 aaPredicted RBP12.61□□□□□ -0.39
VCL-202ENST00000372755 SPATA1Q5VX52 437 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 PPM1KQ8N3J5 372 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 PNMA1Q8ND90 353 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 CFAP61Q8NHU2 1237 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 CAPN7Q9Y6W3 813 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 SOS2Q07890 1332 aaPredicted RBP12.6□□□□□ -0.39
VCL-202ENST00000372755 SMIM24O75264 130 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 PTPREP23469 700 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 ECE1P42892 770 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 ASPHQ12797 758 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 TMCO4Q5TGY1 634 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 GDAP1L1Q96MZ0 367 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 ZNF148Q9UQR1 794 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 GPC4O75487 556 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 DLATP10515 647 aaKnown RBP12.6□□□□□ -0.39
VCL-202ENST00000372755 EAPPQ56P03 285 aaPredicted RBP12.6□□□□□ -0.39
VCL-202ENST00000372755 ANKRD35Q8N283 1001 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 TSPYL2Q9H2G4 693 aaPredicted RBP12.6□□□□□ -0.39
VCL-202ENST00000372755 SLC8A1P32418 973 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 PTK2Q05397 1052 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 FAM26FQ5R3K3 315 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 FLAD1Q8NFF5 587 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 TACO1Q9BSH4 297 aaKnown RBP12.6□□□□□ -0.39
VCL-202ENST00000372755 KIAA0232Q92628 1395 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 MED23Q9ULK4 1368 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 KLRF2D3W0D1 207 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 H7C0C1 242 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 SART1O43290 800 aaKnown RBP12.6□□□□□ -0.39
VCL-202ENST00000372755 ATP5OP48047 213 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 VPS41P49754 854 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 MED4Q9NPJ6 270 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 FAM8A1Q9UBU6 413 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 UGGT2Q9NYU1 1516 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 ABCC10Q5T3U5 1492 aa12.6□□□□□ -0.39
VCL-202ENST00000372755 INPP1P49441 399 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 EIF4A1P60842 406 aaKnown RBP12.59□□□□□ -0.39
VCL-202ENST00000372755 RBM6P78332 1123 aaKnown RBP12.59□□□□□ -0.39
VCL-202ENST00000372755 ICA1Q05084 483 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 PPP2R5AQ15172 486 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 PPP1R2P3Q6NXS1 205 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 POMGNT1Q8WZA1 660 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 TNKSO95271 1327 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 MYL7Q01449 175 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 C4orf50Q6ZRC1 276 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 SUGCTQ9HAC7 445 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 MAD1L1Q9Y6D9 718 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 TYW5A2RUC4 315 aaKnown RBP12.59□□□□□ -0.39
VCL-202ENST00000372755 YWHAGP61981 247 aaKnown RBP eCLIP12.59□□□□□ -0.39
VCL-202ENST00000372755 ZSCAN26Q16670 478 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 TRIM42Q8IWZ5 723 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 CUEDC2Q9H467 287 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 LAD1O00515 517 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 EVI5O60447 810 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 IFRD2Q12894 506 aaPredicted RBP12.59□□□□□ -0.39
VCL-202ENST00000372755 FAM98CQ17RN3 349 aaKnown RBP12.59□□□□□ -0.39
VCL-202ENST00000372755 GADL1Q6ZQY3 521 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 SESTD1Q86VW0 696 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 PDZD8Q8NEN9 1154 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 NLRP7Q8WX94 980 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 RIPOR2Q9Y4F9 1068 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 SKA2Q8WVK7 121 aaPredicted RBP12.59□□□□□ -0.39
VCL-202ENST00000372755 SPZ1Q9BXG8 430 aa12.59□□□□□ -0.39
VCL-202ENST00000372755 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.59□□□□□ -0.39
VCL-202ENST00000372755 LRRIQ4A6NIV6 560 aa12.58□□□□□ -0.39
VCL-202ENST00000372755 IL9RQ01113 521 aa12.58□□□□□ -0.39
VCL-202ENST00000372755 RNASELQ05823 741 aaKnown RBP12.58□□□□□ -0.39
VCL-202ENST00000372755 CAPN12Q6ZSI9 719 aa12.58□□□□□ -0.39
VCL-202ENST00000372755 RFX6Q8HWS3 928 aa12.58□□□□□ -0.39
VCL-202ENST00000372755 RPS6KC1Q96S38 1066 aa12.58□□□□□ -0.39
VCL-202ENST00000372755 DESI2Q9BSY9 194 aa12.58□□□□□ -0.39
VCL-202ENST00000372755 NPC1L1Q9UHC9 1359 aa12.58□□□□□ -0.39
VCL-202ENST00000372755 LUC7L3O95232 432 aaKnown RBP12.58□□□□□ -0.4
VCL-202ENST00000372755 SAT1P21673 171 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 STX1BP61266 288 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 EXOC3L4Q17RC7 722 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 CCDC24Q8N4L8 307 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 FAM81BQ96LP2 452 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 JPH2Q9BR39 696 aaPredicted RBP12.58□□□□□ -0.4
VCL-202ENST00000372755 CCPG1Q9ULG6 757 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 ANGPTL3Q9Y5C1 460 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 INHBAP08476 426 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 MRFAP1L1Q96HT8 127 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 NT5C1BQ96P26 610 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 SERPINB6P35237 376 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 SLFN13Q68D06 897 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 NCAPG2Q86XI2 1143 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 LRRC47Q8N1G4 583 aaKnown RBP12.58□□□□□ -0.4
VCL-202ENST00000372755 PSPC1Q8WXF1 523 aaKnown RBP12.58□□□□□ -0.4
VCL-202ENST00000372755 SLC39A2Q9NP94 309 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 STK17AQ9UEE5 414 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 UHRF1BP1Q6BDS2 1440 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 PDE6AP16499 860 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms