RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 TXNRD1Q16881 649 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 RETREG2Q8NC44 543 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 RASSF8Q8NHQ8 419 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 C7orf25Q9BPX7 421 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 LZTS2Q9BRK4 669 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 SPZ1Q9BXG8 430 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 SRP68Q9UHB9 627 aaKnown RBP14.28□□□□□ -0.12
CTPS1-202ENST00000372621 LDHBP07195 334 aaKnown RBP14.28□□□□□ -0.12
CTPS1-202ENST00000372621 CCNE1P24864 410 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 GRIK5Q16478 980 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 COBLL1Q53SF7 1204 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 MUM1L1Q5H9M0 696 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 ZSCAN29Q8IWY8 852 aaPredicted RBP14.28□□□□□ -0.12
CTPS1-202ENST00000372621 CSGALNACT2Q8N6G5 542 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 SLC44A5Q8NCS7 719 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 P2RX5Q93086 422 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 MAGEC2Q9UBF1 373 aaPredicted RBP14.28□□□□□ -0.12
CTPS1-202ENST00000372621 TFR2Q9UP52 801 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 SNED1Q8TER0 1413 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 ATP1A1P05023 1023 aaKnown RBP14.28□□□□□ -0.12
CTPS1-202ENST00000372621 GPS2Q13227 327 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 MIIPQ5JXC2 388 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 ANKRD40Q6AI12 368 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 CABP7Q86V35 215 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 WDR66Q8TBY9 1149 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 NUP58Q9BVL2 599 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 HDAC6Q9UBN7 1215 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 KDM4FA0A1W2PPD8 638 aa14.27□□□□□ -0.12
CTPS1-202ENST00000372621 OR52Z1P0C646 297 aa14.27□□□□□ -0.12
CTPS1-202ENST00000372621 KRT83P78385 493 aa14.27□□□□□ -0.12
CTPS1-202ENST00000372621 STK4Q13043 487 aa14.27□□□□□ -0.12
CTPS1-202ENST00000372621 CASP8Q14790 479 aa14.27□□□□□ -0.12
CTPS1-202ENST00000372621 RC3H1Q5TC82 1133 aaKnown RBP14.27□□□□□ -0.12
CTPS1-202ENST00000372621 CCDC24Q8N4L8 307 aa14.27□□□□□ -0.12
CTPS1-202ENST00000372621 GBP3Q9H0R5 595 aa14.27□□□□□ -0.12
CTPS1-202ENST00000372621 RCCD1A6NED2 376 aa14.27□□□□□ -0.13
CTPS1-202ENST00000372621 KLRF2D3W0D1 207 aa14.27□□□□□ -0.13
CTPS1-202ENST00000372621 ENC1O14682 589 aa14.27□□□□□ -0.13
CTPS1-202ENST00000372621 KLK7P49862 253 aa14.27□□□□□ -0.13
CTPS1-202ENST00000372621 DIXDC1Q155Q3 683 aa14.27□□□□□ -0.13
CTPS1-202ENST00000372621 CCDC122Q5T0U0 273 aa14.27□□□□□ -0.13
CTPS1-202ENST00000372621 TPTE2Q6XPS3 522 aa14.27□□□□□ -0.13
CTPS1-202ENST00000372621 ZNF444Q8N0Y2 327 aaPredicted RBP14.27□□□□□ -0.13
CTPS1-202ENST00000372621 PURBQ96QR8 312 aaKnown RBP14.27□□□□□ -0.13
CTPS1-202ENST00000372621 MMTAG2Q9BU76 263 aaKnown RBP14.27□□□□□ -0.13
CTPS1-202ENST00000372621 BICDL2A1A5D9 508 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 EIF3CLB5ME19 914 aaKnown RBP14.26□□□□□ -0.13
CTPS1-202ENST00000372621 RPS6KA4O75676 772 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 GOLGA8HP0CJ92 632 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 ZBED6P86452 979 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 FIGNQ5HY92 759 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 KRT25Q7Z3Z0 450 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 SLC51AQ86UW1 340 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 CCDC170Q8IYT3 715 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 TGFBRAP1Q8WUH2 860 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 EIF3CQ99613 913 aaKnown RBP14.26□□□□□ -0.13
CTPS1-202ENST00000372621 TULP2O00295 520 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 N4BP1O75113 896 aaKnown RBP14.26□□□□□ -0.13
CTPS1-202ENST00000372621 USP14P54578 494 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 CDK17Q00537 523 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 PDE4DQ08499 809 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 TSR1Q2NL82 804 aaKnown RBP14.26□□□□□ -0.13
CTPS1-202ENST00000372621 CNOT6LQ96LI5 555 aaKnown RBP14.26□□□□□ -0.13
CTPS1-202ENST00000372621 ERGIC2Q96RQ1 377 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 MMS19Q96T76 1030 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 LACRTQ9GZZ8 138 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 NHEJ1Q9H9Q4 299 aaPredicted RBP14.26□□□□□ -0.13
CTPS1-202ENST00000372621 STX8Q9UNK0 236 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 SAR1BQ9Y6B6 198 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 A0A1W2PQJ5 194 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 PES1O00541 588 aaKnown RBP14.26□□□□□ -0.13
CTPS1-202ENST00000372621 NKRFO15226 690 aaKnown RBP eCLIP14.26□□□□□ -0.13
CTPS1-202ENST00000372621 EIF3JO75822 258 aaKnown RBP14.26□□□□□ -0.13
CTPS1-202ENST00000372621 BAG3O95817 575 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 GSTO1P78417 241 aa14.26□□□□□ -0.13
CTPS1-202ENST00000372621 LRRIQ3A6PVS8 624 aaPredicted RBP14.25□□□□□ -0.13
CTPS1-202ENST00000372621 CCNT1O60563 726 aaKnown RBP14.25□□□□□ -0.13
CTPS1-202ENST00000372621 FCER1AP12319 257 aa14.25□□□□□ -0.13
CTPS1-202ENST00000372621 PPP1R2P41236 205 aa14.25□□□□□ -0.13
CTPS1-202ENST00000372621 TBC1D8BQ0IIM8 1120 aa14.25□□□□□ -0.13
CTPS1-202ENST00000372621 NONOQ15233 471 aaKnown RBP eCLIP14.25□□□□□ -0.135e-6■□□□□ 8.7
CTPS1-202ENST00000372621 KIAA0895Q8NCT3 520 aa14.25□□□□□ -0.13
CTPS1-202ENST00000372621 EHBP1Q8NDI1 1231 aa14.25□□□□□ -0.13
CTPS1-202ENST00000372621 RTFDC1Q9BY42 306 aaPredicted RBP14.25□□□□□ -0.13
CTPS1-202ENST00000372621 CPVLQ9H3G5 476 aa14.25□□□□□ -0.13
CTPS1-202ENST00000372621 KRT86O43790 486 aa14.25□□□□□ -0.13
CTPS1-202ENST00000372621 TRIM21P19474 475 aaKnown RBP14.25□□□□□ -0.13
CTPS1-202ENST00000372621 CYLC1P35663 651 aaPredicted RBP14.25□□□□□ -0.13
CTPS1-202ENST00000372621 LETM2Q2VYF4 491 aa14.25□□□□□ -0.13
CTPS1-202ENST00000372621 FAM114A1Q8IWE2 563 aa14.25□□□□□ -0.13
CTPS1-202ENST00000372621 AMOTL1Q8IY63 956 aa14.25□□□□□ -0.13
CTPS1-202ENST00000372621 JAKMIP2Q96AA8 810 aa14.25□□□□□ -0.13
CTPS1-202ENST00000372621 EEF2KMTQ96G04 330 aa14.25□□□□□ -0.13
CTPS1-202ENST00000372621 SMCO2A6NFE2 343 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 SMARCA1P28370 1054 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 NAPAP54920 295 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 C16orf86Q6ZW13 317 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 PTF1AQ7RTS3 328 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 NEK8Q86SG6 692 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 VPS18Q9P253 973 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms