RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 PTPRAP18433 802 aa14.75□□□□□ -0.05
LDB3-203ENST00000372056 MRPL12P52815 198 aaKnown RBP14.75□□□□□ -0.05
LDB3-203ENST00000372056 IKQ13123 557 aaPredicted RBP14.75□□□□□ -0.05
LDB3-203ENST00000372056 PTGDRQ13258 359 aa14.75□□□□□ -0.05
LDB3-203ENST00000372056 ZRSR1Q15695 479 aaKnown RBP14.75□□□□□ -0.05
LDB3-203ENST00000372056 DPCR1Q3MIW9 517 aa14.75□□□□□ -0.05
LDB3-203ENST00000372056 SYDE2Q5VT97 1194 aa14.75□□□□□ -0.05
LDB3-203ENST00000372056 LDHDQ86WU2 507 aa14.75□□□□□ -0.05
LDB3-203ENST00000372056 SAMD3Q8N6K7 520 aa14.75□□□□□ -0.05
LDB3-203ENST00000372056 NAT10Q9H0A0 1025 aaKnown RBP14.75□□□□□ -0.05
LDB3-203ENST00000372056 JMJD4Q9H9V9 463 aa14.75□□□□□ -0.05
LDB3-203ENST00000372056 RAD21O60216 631 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 PTMAP06454 111 aaKnown RBP14.74□□□□□ -0.05
LDB3-203ENST00000372056 NAPAP54920 295 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 BACE1P56817 501 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 ORC2Q13416 577 aaPredicted RBP14.74□□□□□ -0.05
LDB3-203ENST00000372056 EAPPQ56P03 285 aaPredicted RBP14.74□□□□□ -0.05
LDB3-203ENST00000372056 USP49Q70CQ1 688 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 HOMER1Q86YM7 354 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 CDAN1Q8IWY9 1227 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 CNNM3Q8NE01 707 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 RASGRP4Q8TDF6 673 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 PIGSQ96S52 555 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 AMNQ9BXJ7 453 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 UBA5Q9GZZ9 404 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 PCDHA6Q9UN73 950 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 PCDHA8Q9Y5H6 950 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 FRMPD2Q68DX3 1309 aaPredicted RBP14.74□□□□□ -0.05
LDB3-203ENST00000372056 TMEM232C9JQI7 657 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 POLR2DO15514 142 aaKnown RBP14.74□□□□□ -0.05
LDB3-203ENST00000372056 NLRP12P59046 1061 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 JAG1P78504 1218 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 MDM2Q00987 491 aaPredicted RBP14.74□□□□□ -0.05
LDB3-203ENST00000372056 PPATQ06203 517 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 PNOCQ13519 176 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 KCTD1Q719H9 257 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 KRT25Q7Z3Z0 450 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 DHX40Q8IX18 779 aaKnown RBP14.74□□□□□ -0.05
LDB3-203ENST00000372056 PRPF38AQ8NAV1 312 aaKnown RBP14.74□□□□□ -0.05
LDB3-203ENST00000372056 CDCA5Q96FF9 252 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 BPIFA3Q9BQP9 254 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 TMOD4Q9NZQ9 345 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 CLEC11AQ9Y240 323 aa14.74□□□□□ -0.05
LDB3-203ENST00000372056 POLR2AP24928 1970 aaKnown RBP14.73□□□□□ -0.05
LDB3-203ENST00000372056 CCDC194A0A1B0GVG4 234 aa14.73□□□□□ -0.05
LDB3-203ENST00000372056 POTECB2RU33 542 aa14.73□□□□□ -0.05
LDB3-203ENST00000372056 GOLGA6L19H0YKK7 550 aa14.73□□□□□ -0.05
LDB3-203ENST00000372056 BIN1O00499 593 aa14.73□□□□□ -0.05
LDB3-203ENST00000372056 INPP5BP32019 993 aa14.73□□□□□ -0.05
LDB3-203ENST00000372056 MCM7P33993 719 aa14.73□□□□□ -0.05
LDB3-203ENST00000372056 SH3D19Q5HYK7 790 aa14.73□□□□□ -0.05
LDB3-203ENST00000372056 ACER1Q8TDN7 264 aa14.73□□□□□ -0.05
LDB3-203ENST00000372056 NAP1L4Q99733 375 aaKnown RBP14.73□□□□□ -0.05
LDB3-203ENST00000372056 VAT1LQ9HCJ6 419 aa14.73□□□□□ -0.05
LDB3-203ENST00000372056 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.73□□□□□ -0.05
LDB3-203ENST00000372056 MYPNQ86TC9 1320 aa14.72□□□□□ -0.05
LDB3-203ENST00000372056 CXCL11O14625 94 aa14.72□□□□□ -0.05
LDB3-203ENST00000372056 ACTN4O43707 911 aaKnown RBP14.72□□□□□ -0.05
LDB3-203ENST00000372056 CLCN1P35523 988 aa14.72□□□□□ -0.05
LDB3-203ENST00000372056 ECE1P42892 770 aa14.72□□□□□ -0.05
LDB3-203ENST00000372056 SHROOM1Q2M3G4 852 aaPredicted RBP14.72□□□□□ -0.05
LDB3-203ENST00000372056 ERO1BQ86YB8 467 aa14.72□□□□□ -0.05
LDB3-203ENST00000372056 EPSTI1Q96J88 318 aa14.72□□□□□ -0.05
LDB3-203ENST00000372056 HOOK1Q9UJC3 728 aaKnown RBP14.72□□□□□ -0.05
LDB3-203ENST00000372056 ZKSCAN5Q9Y2L8 839 aa14.72□□□□□ -0.05
LDB3-203ENST00000372056 SMCO2A6NFE2 343 aa14.72□□□□□ -0.05
LDB3-203ENST00000372056 BECN2A8MW95 431 aa14.72□□□□□ -0.05
LDB3-203ENST00000372056 ARL6IP4Q66PJ3 421 aaKnown RBP14.72□□□□□ -0.05
LDB3-203ENST00000372056 SARM1Q6SZW1 724 aa14.72□□□□□ -0.05
LDB3-203ENST00000372056 FBXO11Q86XK2 927 aa14.72□□□□□ -0.05
LDB3-203ENST00000372056 PLA2G4DQ86XP0 818 aa14.72□□□□□ -0.05
LDB3-203ENST00000372056 C4orf32Q8N8J7 132 aa14.72□□□□□ -0.05
LDB3-203ENST00000372056 SYMPKQ92797 1274 aaKnown RBP14.72□□□□□ -0.05
LDB3-203ENST00000372056 CUL5Q93034 780 aa14.72□□□□□ -0.05
LDB3-203ENST00000372056 SERTAD1Q9UHV2 236 aa14.72□□□□□ -0.05
LDB3-203ENST00000372056 ZHX2Q9Y6X8 837 aa14.72□□□□□ -0.05
LDB3-203ENST00000372056 VWA3AA6NCI4 1184 aa14.71□□□□□ -0.05
LDB3-203ENST00000372056 FOXN1O15353 648 aa14.71□□□□□ -0.05
LDB3-203ENST00000372056 ZNF75DP51815 510 aa14.71□□□□□ -0.05
LDB3-203ENST00000372056 ADCY7P51828 1080 aa14.71□□□□□ -0.05
LDB3-203ENST00000372056 POSTNQ15063 836 aa14.71□□□□□ -0.05
LDB3-203ENST00000372056 CDC37Q16543 378 aaPredicted RBP14.71□□□□□ -0.05
LDB3-203ENST00000372056 KANK3Q6NY19 840 aa14.71□□□□□ -0.05
LDB3-203ENST00000372056 AOPEPQ8N6M6 819 aa14.71□□□□□ -0.05
LDB3-203ENST00000372056 PDILTQ8N807 584 aa14.71□□□□□ -0.05
LDB3-203ENST00000372056 RIC8AQ9NPQ8 531 aa14.71□□□□□ -0.05
LDB3-203ENST00000372056 MAP3K20Q9NYL2 800 aaKnown RBP14.71□□□□□ -0.05
LDB3-203ENST00000372056 PRR12Q9ULL5 1215 aa14.71□□□□□ -0.05
LDB3-203ENST00000372056 AFG3L2Q9Y4W6 797 aa14.71□□□□□ -0.05
LDB3-203ENST00000372056 PCDHA5Q9Y5H7 936 aa14.71□□□□□ -0.05
LDB3-203ENST00000372056 A0A087X0B3 334 aa14.7□□□□□ -0.06
LDB3-203ENST00000372056 ADM5C9JUS6 153 aa14.7□□□□□ -0.06
LDB3-203ENST00000372056 FOSP01100 380 aaPredicted RBP14.7□□□□□ -0.06
LDB3-203ENST00000372056 MSNP26038 577 aaKnown RBP14.7□□□□□ -0.06
LDB3-203ENST00000372056 SPP2Q13103 211 aa14.7□□□□□ -0.06
LDB3-203ENST00000372056 IL17AQ16552 155 aa14.7□□□□□ -0.06
LDB3-203ENST00000372056 INF2Q27J81 1249 aa14.7□□□□□ -0.06
LDB3-203ENST00000372056 FAM83BQ5T0W9 1011 aa14.7□□□□□ -0.06
LDB3-203ENST00000372056 NT5DC1Q5TFE4 455 aa14.7□□□□□ -0.06
LDB3-203ENST00000372056 TTBK2Q6IQ55 1244 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms