RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 Q3C1V9 767 aa16.25■□□□□ 0.19
NDC1-201ENST00000371429 PPP1R21Q6ZMI0 780 aa16.25■□□□□ 0.19
NDC1-201ENST00000371429 MYO1AQ9UBC5 1043 aa16.25■□□□□ 0.19
NDC1-201ENST00000371429 TULP4Q9NRJ4 1543 aa16.25■□□□□ 0.19
NDC1-201ENST00000371429 HNRNPDLO14979 420 aaKnown RBP16.25■□□□□ 0.19
NDC1-201ENST00000371429 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.25■□□□□ 0.19
NDC1-201ENST00000371429 POMGNT1Q8WZA1 660 aa16.25■□□□□ 0.19
NDC1-201ENST00000371429 NUB1Q9Y5A7 615 aa16.25■□□□□ 0.19
NDC1-201ENST00000371429 INO80B-WBP1J3KQ70 363 aa16.25■□□□□ 0.19
NDC1-201ENST00000371429 N4BP1O75113 896 aaKnown RBP16.25■□□□□ 0.19
NDC1-201ENST00000371429 ZNF75DP51815 510 aa16.25■□□□□ 0.19
NDC1-201ENST00000371429 KRBA2Q6ZNG9 492 aa16.25■□□□□ 0.19
NDC1-201ENST00000371429 SH3RF3Q8TEJ3 882 aaPredicted RBP16.25■□□□□ 0.19
NDC1-201ENST00000371429 GJA10Q969M2 543 aa16.25■□□□□ 0.19
NDC1-201ENST00000371429 STRBPQ96SI9 672 aaKnown RBP16.25■□□□□ 0.19
NDC1-201ENST00000371429 NAPGQ99747 312 aaPredicted RBP16.25■□□□□ 0.19
NDC1-201ENST00000371429 APOL6Q9BWW8 343 aa16.25■□□□□ 0.19
NDC1-201ENST00000371429 LSM14BQ9BX40 385 aaKnown RBP16.25■□□□□ 0.19
NDC1-201ENST00000371429 INO80BQ9C086 356 aaPredicted RBP16.25■□□□□ 0.19
NDC1-201ENST00000371429 ADGRB3O60242 1522 aa16.24■□□□□ 0.19
NDC1-201ENST00000371429 MYCP01106 439 aaPredicted RBP16.24■□□□□ 0.19
NDC1-201ENST00000371429 CCND2P30279 289 aa16.24■□□□□ 0.19
NDC1-201ENST00000371429 HS1BP3Q53T59 392 aa16.24■□□□□ 0.19
NDC1-201ENST00000371429 LMBRD1Q9NUN5 540 aa16.24■□□□□ 0.19
NDC1-201ENST00000371429 HESX1Q9UBX0 185 aa16.24■□□□□ 0.19
NDC1-201ENST00000371429 CD2APQ9Y5K6 639 aa16.24■□□□□ 0.19
NDC1-201ENST00000371429 CLTCL1P53675 1640 aa16.24■□□□□ 0.19
NDC1-201ENST00000371429 RNF17Q9BXT8 1623 aaKnown RBP16.24■□□□□ 0.19
NDC1-201ENST00000371429 CDC42BPAQ5VT25 1732 aa16.24■□□□□ 0.19
NDC1-201ENST00000371429 ADAM9Q13443 819 aa16.24■□□□□ 0.19
NDC1-201ENST00000371429 MIS18BP1Q6P0N0 1132 aa16.24■□□□□ 0.19
NDC1-201ENST00000371429 IQCDQ96DY2 449 aa16.24■□□□□ 0.19
NDC1-201ENST00000371429 NSRP1Q9H0G5 558 aaKnown RBP16.24■□□□□ 0.19
NDC1-201ENST00000371429 METTL14Q9HCE5 456 aaKnown RBP16.24■□□□□ 0.19
NDC1-201ENST00000371429 RGS12O14924 1447 aa16.24■□□□□ 0.19
NDC1-201ENST00000371429 SH2B2O14492 632 aaPredicted RBP16.24■□□□□ 0.19
NDC1-201ENST00000371429 ZEB2O60315 1214 aa16.24■□□□□ 0.19
NDC1-201ENST00000371429 ABL1P00519 1130 aa16.24■□□□□ 0.19
NDC1-201ENST00000371429 CDC37Q16543 378 aaPredicted RBP16.24■□□□□ 0.19
NDC1-201ENST00000371429 RAB3IL1Q8TBN0 382 aa16.24■□□□□ 0.19
NDC1-201ENST00000371429 PRKAG2Q9UGJ0 569 aa16.24■□□□□ 0.19
NDC1-201ENST00000371429 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.24■□□□□ 0.192e-6■■■■□ 21.7
NDC1-201ENST00000371429 USP31Q70CQ4 1352 aa16.24■□□□□ 0.19
NDC1-201ENST00000371429 TUBBP07437 444 aa16.24■□□□□ 0.19
NDC1-201ENST00000371429 ZNF827Q17R98 1081 aa16.24■□□□□ 0.19
NDC1-201ENST00000371429 KCNJ18B7U540 433 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 ZBTB24O43167 697 aaPredicted RBP16.23■□□□□ 0.19
NDC1-201ENST00000371429 ACTN4O43707 911 aaKnown RBP16.23■□□□□ 0.19
NDC1-201ENST00000371429 IFNAR1P17181 557 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 KCNJ12Q14500 433 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 C6orf163Q5TEZ5 329 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 TTC14Q96N46 770 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 WRNIP1Q96S55 665 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 SELENOSQ9BQE4 189 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 CLIC4Q9Y696 253 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 RPAP1Q9BWH6 1393 aaPredicted RBP16.23■□□□□ 0.19
NDC1-201ENST00000371429 DYNC1I1O14576 645 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 MTX1Q13505 466 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 GBP6Q6ZN66 633 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 DGKHQ86XP1 1220 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 ISCA1Q9BUE6 129 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 RPN1P04843 607 aaKnown RBP16.23■□□□□ 0.19
NDC1-201ENST00000371429 MORC3Q14149 939 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 TYW1BQ6NUM6 668 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 CEP170P1Q96L14 293 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 ZHX2Q9Y6X8 837 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 NT5C2P49902 561 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 TRIML1Q8N9V2 468 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 NSUN7Q8NE18 718 aaKnown RBP16.23■□□□□ 0.19
NDC1-201ENST00000371429 LARP4BQ92615 738 aaKnown RBP16.23■□□□□ 0.19
NDC1-201ENST00000371429 IMPACTQ9P2X3 320 aa16.23■□□□□ 0.19
NDC1-201ENST00000371429 CAPN9O14815 690 aa16.22■□□□□ 0.19
NDC1-201ENST00000371429 ARHGAP6O43182 974 aa16.22■□□□□ 0.19
NDC1-201ENST00000371429 XPOTO43592 962 aaKnown RBP16.22■□□□□ 0.19
NDC1-201ENST00000371429 RRP9O43818 475 aaKnown RBP16.22■□□□□ 0.19
NDC1-201ENST00000371429 CEP104O60308 925 aa16.22■□□□□ 0.19
NDC1-201ENST00000371429 LIFRP42702 1097 aa16.22■□□□□ 0.19
NDC1-201ENST00000371429 SIRT2Q8IXJ6 389 aa16.22■□□□□ 0.19
NDC1-201ENST00000371429 PLEKHG2Q9H7P9 1386 aa16.22■□□□□ 0.19
NDC1-201ENST00000371429 EIF2AK2P19525 551 aaKnown RBP16.22■□□□□ 0.19
NDC1-201ENST00000371429 UAP1Q16222 522 aaPredicted RBP16.22■□□□□ 0.19
NDC1-201ENST00000371429 TMED8Q6PL24 325 aaPredicted RBP16.22■□□□□ 0.19
NDC1-201ENST00000371429 PPM1KQ8N3J5 372 aa16.22■□□□□ 0.19
NDC1-201ENST00000371429 ATRIPQ8WXE1 791 aa16.22■□□□□ 0.19
NDC1-201ENST00000371429 SLF1Q9BQI6 1058 aa16.22■□□□□ 0.19
NDC1-201ENST00000371429 MAGEF1Q9HAY2 307 aa16.22■□□□□ 0.19
NDC1-201ENST00000371429 TTLL3Q9Y4R7 772 aa16.22■□□□□ 0.19
NDC1-201ENST00000371429 ZBTB16Q05516 673 aa16.22■□□□□ 0.19
NDC1-201ENST00000371429 LONRF3Q496Y0 759 aa16.22■□□□□ 0.19
NDC1-201ENST00000371429 AK8Q96MA6 479 aa16.22■□□□□ 0.19
NDC1-201ENST00000371429 SETD1BQ9UPS6 1966 aaKnown RBP16.22■□□□□ 0.19
NDC1-201ENST00000371429 EXOC8Q8IYI6 725 aa16.22■□□□□ 0.19
NDC1-201ENST00000371429 SYCE1Q8N0S2 351 aa16.22■□□□□ 0.19
NDC1-201ENST00000371429 GABPB2Q8TAK5 448 aaPredicted RBP16.22■□□□□ 0.19
NDC1-201ENST00000371429 HAUS2Q9NVX0 235 aa16.22■□□□□ 0.19
NDC1-201ENST00000371429 PTCH1Q13635 1447 aa16.21■□□□□ 0.19
NDC1-201ENST00000371429 GTF2F1P35269 517 aaKnown RBP eCLIP16.21■□□□□ 0.19
NDC1-201ENST00000371429 SLC39A14Q15043 492 aa16.21■□□□□ 0.19
NDC1-201ENST00000371429 PEX26Q7Z412 305 aa16.21■□□□□ 0.19
NDC1-201ENST00000371429 U2AF1L4Q8WU68 220 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms