RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 FOXN1O15353 648 aa19.91■□□□□ 0.78
SSBP3-203ENST00000371319 DCAF15Q66K64 600 aa19.91■□□□□ 0.78
SSBP3-203ENST00000371319 LUZP1Q86V48 1076 aa19.91■□□□□ 0.78
SSBP3-203ENST00000371319 PDILTQ8N807 584 aa19.91■□□□□ 0.78
SSBP3-203ENST00000371319 SSC5DA1L4H1 1573 aa19.91■□□□□ 0.78
SSBP3-203ENST00000371319 INPP5BP32019 993 aa19.91■□□□□ 0.78
SSBP3-203ENST00000371319 ZNF165P49910 485 aa19.91■□□□□ 0.78
SSBP3-203ENST00000371319 NLRP12P59046 1061 aa19.91■□□□□ 0.78
SSBP3-203ENST00000371319 DTHD1Q6ZMT9 781 aa19.91■□□□□ 0.78
SSBP3-203ENST00000371319 RANBP17Q9H2T7 1088 aaKnown RBP19.91■□□□□ 0.78
SSBP3-203ENST00000371319 PPP2R3BQ9Y5P8 575 aa19.91■□□□□ 0.78
SSBP3-203ENST00000371319 NEMFO60524 1076 aa19.9■□□□□ 0.78
SSBP3-203ENST00000371319 OR52Z1P0C646 297 aa19.9■□□□□ 0.78
SSBP3-203ENST00000371319 TAL1P17542 331 aaPredicted RBP19.9■□□□□ 0.78
SSBP3-203ENST00000371319 IQCB1Q15051 598 aa19.9■□□□□ 0.78
SSBP3-203ENST00000371319 PRAMEF18Q5VWM3 479 aa19.9■□□□□ 0.78
SSBP3-203ENST00000371319 FAM160B2Q86V87 743 aa19.9■□□□□ 0.78
SSBP3-203ENST00000371319 CHURC1Q8WUH1 139 aa19.9■□□□□ 0.78
SSBP3-203ENST00000371319 DHX58Q96C10 678 aa19.9■□□□□ 0.78
SSBP3-203ENST00000371319 POLR2AP24928 1970 aaKnown RBP19.9■□□□□ 0.78
SSBP3-203ENST00000371319 PHIPQ8WWQ0 1821 aa19.89■□□□□ 0.77
SSBP3-203ENST00000371319 USP17L15C9J2P7 530 aa19.89■□□□□ 0.77
SSBP3-203ENST00000371319 USP17L13C9JLJ4 530 aa19.89■□□□□ 0.77
SSBP3-203ENST00000371319 USP17L11C9JVI0 530 aa19.89■□□□□ 0.77
SSBP3-203ENST00000371319 USP17L18D6R9N7 530 aa19.89■□□□□ 0.77
SSBP3-203ENST00000371319 USP17L22D6RA61 530 aa19.89■□□□□ 0.77
SSBP3-203ENST00000371319 USP17L17D6RBQ6 530 aa19.89■□□□□ 0.77
SSBP3-203ENST00000371319 USP17L19D6RCP7 530 aa19.89■□□□□ 0.77
SSBP3-203ENST00000371319 USP17L20D6RJB6 530 aa19.89■□□□□ 0.77
SSBP3-203ENST00000371319 AP5Z1O43299 807 aa19.89■□□□□ 0.77
SSBP3-203ENST00000371319 PRR29P0C7W0 189 aa19.89■□□□□ 0.77
SSBP3-203ENST00000371319 USP17L24Q0WX57 530 aa19.89■□□□□ 0.77
SSBP3-203ENST00000371319 C9orf131Q5VYM1 1079 aa19.89■□□□□ 0.77
SSBP3-203ENST00000371319 USP17L6PQ6QN14 398 aa19.89■□□□□ 0.77
SSBP3-203ENST00000371319 SH3RF1Q7Z6J0 888 aa19.89■□□□□ 0.77
SSBP3-203ENST00000371319 HOOK2Q96ED9 719 aa19.89■□□□□ 0.77
SSBP3-203ENST00000371319 KIAA1683Q9H0B3 1180 aa19.89■□□□□ 0.77
SSBP3-203ENST00000371319 USP25Q9UHP3 1055 aa19.89■□□□□ 0.77
SSBP3-203ENST00000371319 FEM1BQ9UK73 627 aa19.89■□□□□ 0.77
SSBP3-203ENST00000371319 BIN1O00499 593 aa19.88■□□□□ 0.77
SSBP3-203ENST00000371319 MEIS2O14770 477 aa19.88■□□□□ 0.77
SSBP3-203ENST00000371319 OPLAHO14841 1288 aa19.88■□□□□ 0.77
SSBP3-203ENST00000371319 POSTNQ15063 836 aa19.88■□□□□ 0.77
SSBP3-203ENST00000371319 E2F4Q16254 413 aa19.88■□□□□ 0.77
SSBP3-203ENST00000371319 DPCR1Q3MIW9 517 aa19.88■□□□□ 0.77
SSBP3-203ENST00000371319 USH1GQ495M9 461 aa19.88■□□□□ 0.77
SSBP3-203ENST00000371319 KANK3Q6NY19 840 aa19.88■□□□□ 0.77
SSBP3-203ENST00000371319 ILDR2Q71H61 639 aa19.88■□□□□ 0.77
SSBP3-203ENST00000371319 POTEDQ86YR6 584 aa19.88■□□□□ 0.77
SSBP3-203ENST00000371319 GRAMD1CQ8IYS0 662 aa19.88■□□□□ 0.77
SSBP3-203ENST00000371319 SCYL3Q8IZE3 742 aa19.88■□□□□ 0.77
SSBP3-203ENST00000371319 FEZ1Q99689 392 aa19.88■□□□□ 0.77
SSBP3-203ENST00000371319 PITPNM2Q9BZ72 1349 aa19.88■□□□□ 0.77
SSBP3-203ENST00000371319 TDP2O95551 362 aa19.87■□□□□ 0.77
SSBP3-203ENST00000371319 SLFN14P0C7P3 912 aa19.87■□□□□ 0.77
SSBP3-203ENST00000371319 CEP57L1Q8IYX8 460 aa19.87■□□□□ 0.77
SSBP3-203ENST00000371319 KIFC2Q96AC6 838 aa19.87■□□□□ 0.77
SSBP3-203ENST00000371319 MTMR9Q96QG7 549 aa19.87■□□□□ 0.77
SSBP3-203ENST00000371319 P2RX7Q99572 595 aaKnown RBP19.87■□□□□ 0.77
SSBP3-203ENST00000371319 ANO3Q9BYT9 981 aa19.87■□□□□ 0.77
SSBP3-203ENST00000371319 ADARB2Q9NS39 739 aaKnown RBP19.87■□□□□ 0.77
SSBP3-203ENST00000371319 HOOK1Q9UJC3 728 aaKnown RBP19.87■□□□□ 0.77
SSBP3-203ENST00000371319 PCDHA5Q9Y5H7 936 aa19.87■□□□□ 0.77
SSBP3-203ENST00000371319 SMCHD1A6NHR9 2005 aa19.87■□□□□ 0.77
SSBP3-203ENST00000371319 SLC37A4O43826 429 aa19.87■□□□□ 0.77
SSBP3-203ENST00000371319 SARSP49591 514 aaKnown RBP19.87■□□□□ 0.77
SSBP3-203ENST00000371319 NT5DC1Q5TFE4 455 aa19.87■□□□□ 0.77
SSBP3-203ENST00000371319 PPP4R3AQ6IN85 833 aa19.87■□□□□ 0.77
SSBP3-203ENST00000371319 DHX40Q8IX18 779 aaKnown RBP19.87■□□□□ 0.77
SSBP3-203ENST00000371319 PAGE5Q96GU1 130 aa19.87■□□□□ 0.77
SSBP3-203ENST00000371319 FBXO28Q9NVF7 368 aa19.87■□□□□ 0.77
SSBP3-203ENST00000371319 PP2D1A8MPX8 630 aa19.86■□□□□ 0.77
SSBP3-203ENST00000371319 WDR46O15213 610 aaKnown RBP19.86■□□□□ 0.77
SSBP3-203ENST00000371319 LMOD1P29536 600 aaPredicted RBP19.86■□□□□ 0.77
SSBP3-203ENST00000371319 AP3B2Q13367 1082 aa19.86■□□□□ 0.77
SSBP3-203ENST00000371319 PDXDC2PQ6P474 469 aa19.86■□□□□ 0.77
SSBP3-203ENST00000371319 LPAR1Q92633 364 aa19.86■□□□□ 0.77
SSBP3-203ENST00000371319 BPIFA3Q9BQP9 254 aa19.86■□□□□ 0.77
SSBP3-203ENST00000371319 PYM1Q9BRP8 204 aaKnown RBP19.86■□□□□ 0.77
SSBP3-203ENST00000371319 WDR18Q9BV38 432 aa19.86■□□□□ 0.77
SSBP3-203ENST00000371319 CCSER1Q9C0I3 900 aa19.86■□□□□ 0.77
SSBP3-203ENST00000371319 FZD1Q9UP38 647 aa19.86■□□□□ 0.77
SSBP3-203ENST00000371319 ADCY5O95622 1261 aa19.85■□□□□ 0.77
SSBP3-203ENST00000371319 DGKZQ13574 1117 aa19.85■□□□□ 0.77
SSBP3-203ENST00000371319 ZRSR1Q15695 479 aaKnown RBP19.85■□□□□ 0.77
SSBP3-203ENST00000371319 CALCRLQ16602 461 aa19.85■□□□□ 0.77
SSBP3-203ENST00000371319 MCTP2Q6DN12 878 aa19.85■□□□□ 0.77
SSBP3-203ENST00000371319 ISM2Q6H9L7 571 aa19.85■□□□□ 0.77
SSBP3-203ENST00000371319 CCDC174Q6PII3 467 aa19.85■□□□□ 0.77
SSBP3-203ENST00000371319 IQUBQ8NA54 791 aa19.85■□□□□ 0.77
SSBP3-203ENST00000371319 ZKSCAN4Q969J2 545 aaPredicted RBP19.85■□□□□ 0.77
SSBP3-203ENST00000371319 WRNIP1Q96S55 665 aa19.85■□□□□ 0.77
SSBP3-203ENST00000371319 MAN1B1Q9UKM7 699 aa19.85■□□□□ 0.77
SSBP3-203ENST00000371319 PAPPA2Q9BXP8 1791 aa19.85■□□□□ 0.77
SSBP3-203ENST00000371319 PARP14Q460N5 1801 aa19.85■□□□□ 0.77
SSBP3-203ENST00000371319 CDC25AP30304 524 aa19.84■□□□□ 0.77
SSBP3-203ENST00000371319 TRAF1Q13077 416 aa19.84■□□□□ 0.77
SSBP3-203ENST00000371319 SPATA20Q8TB22 786 aa19.84■□□□□ 0.77
SSBP3-203ENST00000371319 CRYGNQ8WXF5 182 aa19.84■□□□□ 0.77
SSBP3-203ENST00000371319 KLRG1Q96E93 195 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms