RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 CA12O43570 354 aa20.28■□□□□ 0.84
VPS37B-202ENST00000371248 PDCP20941 246 aa20.28■□□□□ 0.84
VPS37B-202ENST00000371248 ERVK-9P63128 1117 aa20.28■□□□□ 0.84
VPS37B-202ENST00000371248 ERVK-24P63145 666 aa20.28■□□□□ 0.84
VPS37B-202ENST00000371248 HOMER2Q9NSB8 354 aa20.28■□□□□ 0.84
VPS37B-202ENST00000371248 CPA4Q9UI42 421 aa20.28■□□□□ 0.84
VPS37B-202ENST00000371248 KCNJ14Q9UNX9 436 aa20.28■□□□□ 0.84
VPS37B-202ENST00000371248 ABCB11O95342 1321 aa20.28■□□□□ 0.84
VPS37B-202ENST00000371248 TLR2O60603 784 aa20.28■□□□□ 0.84
VPS37B-202ENST00000371248 SYT1P21579 422 aa20.28■□□□□ 0.84
VPS37B-202ENST00000371248 KRT40Q6A162 431 aa20.28■□□□□ 0.84
VPS37B-202ENST00000371248 GPRC5AQ8NFJ5 357 aa20.28■□□□□ 0.84
VPS37B-202ENST00000371248 CCDC12Q8WUD4 166 aaPredicted RBP20.28■□□□□ 0.84
VPS37B-202ENST00000371248 TRERF1Q96PN7 1200 aa20.28■□□□□ 0.84
VPS37B-202ENST00000371248 ADGRA2Q96PE1 1338 aa20.27■□□□□ 0.84
VPS37B-202ENST00000371248 SMCO2A6NFE2 343 aa20.27■□□□□ 0.84
VPS37B-202ENST00000371248 NLRP5P59047 1200 aa20.27■□□□□ 0.84
VPS37B-202ENST00000371248 CCDC148Q8NFR7 591 aa20.27■□□□□ 0.84
VPS37B-202ENST00000371248 FBXO18Q8NFZ0 1043 aa20.27■□□□□ 0.84
VPS37B-202ENST00000371248 MOV10L1Q9BXT6 1211 aaKnown RBP20.27■□□□□ 0.84
VPS37B-202ENST00000371248 MRPL11Q9Y3B7 192 aaKnown RBP20.27■□□□□ 0.84
VPS37B-202ENST00000371248 H3BQV1 296 aa20.26■□□□□ 0.83
VPS37B-202ENST00000371248 IFFO2Q5TF58 517 aa20.26■□□□□ 0.83
VPS37B-202ENST00000371248 PPP1R18Q6NYC8 613 aa20.26■□□□□ 0.83
VPS37B-202ENST00000371248 RIOX2Q8IUF8 465 aa20.26■□□□□ 0.83
VPS37B-202ENST00000371248 PHF20Q9BVI0 1012 aa20.26■□□□□ 0.83
VPS37B-202ENST00000371248 MORF4L1Q9UBU8 362 aa20.26■□□□□ 0.83
VPS37B-202ENST00000371248 FAM110CQ1W6H9 321 aa20.26■□□□□ 0.83
VPS37B-202ENST00000371248 MUM1L1Q5H9M0 696 aa20.26■□□□□ 0.83
VPS37B-202ENST00000371248 RNF146Q9NTX7 359 aa20.26■□□□□ 0.83
VPS37B-202ENST00000371248 RNF186Q9NXI6 227 aa20.26■□□□□ 0.83
VPS37B-202ENST00000371248 TRPA1O75762 1119 aa20.25■□□□□ 0.83
VPS37B-202ENST00000371248 TKFCQ3LXA3 575 aa20.25■□□□□ 0.83
VPS37B-202ENST00000371248 C17orf99Q6UX52 265 aa20.25■□□□□ 0.83
VPS37B-202ENST00000371248 NCAPG2Q86XI2 1143 aa20.25■□□□□ 0.83
VPS37B-202ENST00000371248 ZMYND12Q9H0C1 365 aa20.25■□□□□ 0.83
VPS37B-202ENST00000371248 R3HDMLQ9H3Y0 253 aa20.25■□□□□ 0.83
VPS37B-202ENST00000371248 C6orf50Q9HD87 102 aa20.25■□□□□ 0.83
VPS37B-202ENST00000371248 RTN4Q9NQC3 1192 aaKnown RBP20.25■□□□□ 0.83
VPS37B-202ENST00000371248 CEP350Q5VT06 3117 aa20.25■□□□□ 0.83
VPS37B-202ENST00000371248 VPS37CA5D8V6 355 aaPredicted RBP20.25■□□□□ 0.83
VPS37B-202ENST00000371248 STX6O43752 255 aa20.25■□□□□ 0.83
VPS37B-202ENST00000371248 TBC1D8O95759 1140 aa20.25■□□□□ 0.83
VPS37B-202ENST00000371248 BCRP11274 1271 aa20.25■□□□□ 0.83
VPS37B-202ENST00000371248 CLEC4DQ8WXI8 215 aa20.25■□□□□ 0.83
VPS37B-202ENST00000371248 PSTPIP2Q9H939 334 aa20.25■□□□□ 0.83
VPS37B-202ENST00000371248 OPLAHO14841 1288 aa20.24■□□□□ 0.83
VPS37B-202ENST00000371248 SLC25A27O95847 323 aa20.24■□□□□ 0.83
VPS37B-202ENST00000371248 MMP1P03956 469 aa20.24■□□□□ 0.83
VPS37B-202ENST00000371248 ERCC3P19447 782 aa20.24■□□□□ 0.83
VPS37B-202ENST00000371248 CCNA1P78396 465 aa20.24■□□□□ 0.83
VPS37B-202ENST00000371248 FAM177A1Q8N128 213 aaPredicted RBP20.24■□□□□ 0.83
VPS37B-202ENST00000371248 ESYT2A0FGR8 921 aa20.23■□□□□ 0.83
VPS37B-202ENST00000371248 NFIBO00712 420 aa20.23■□□□□ 0.83
VPS37B-202ENST00000371248 CALML3P27482 149 aa20.23■□□□□ 0.83
VPS37B-202ENST00000371248 GNA11P29992 359 aa20.23■□□□□ 0.83
VPS37B-202ENST00000371248 ADCY7P51828 1080 aa20.23■□□□□ 0.83
VPS37B-202ENST00000371248 DNAJC5GQ8N7S2 189 aa20.23■□□□□ 0.83
VPS37B-202ENST00000371248 CHST13Q8NET6 341 aa20.23■□□□□ 0.83
VPS37B-202ENST00000371248 TBC1D5Q92609 795 aa20.23■□□□□ 0.83
VPS37B-202ENST00000371248 CUL5Q93034 780 aa20.23■□□□□ 0.83
VPS37B-202ENST00000371248 PORCNQ9H237 461 aa20.23■□□□□ 0.83
VPS37B-202ENST00000371248 ACAD9Q9H845 621 aa20.23■□□□□ 0.83
VPS37B-202ENST00000371248 RBBP6Q7Z6E9 1792 aaKnown RBP20.23■□□□□ 0.83
VPS37B-202ENST00000371248 ADAMTS3O15072 1205 aa20.23■□□□□ 0.83
VPS37B-202ENST00000371248 CFBP00751 764 aa20.23■□□□□ 0.83
VPS37B-202ENST00000371248 DDIT3P35638 169 aa20.23■□□□□ 0.83
VPS37B-202ENST00000371248 WDR78Q5VTH9 848 aa20.23■□□□□ 0.83
VPS37B-202ENST00000371248 RIC8AQ9NPQ8 531 aa20.23■□□□□ 0.83
VPS37B-202ENST00000371248 PCDHA4Q9UN74 947 aa20.23■□□□□ 0.83
VPS37B-202ENST00000371248 ZNFX1Q9P2E3 1918 aaKnown RBP20.23■□□□□ 0.83
VPS37B-202ENST00000371248 COPB2P35606 906 aa20.22■□□□□ 0.83
VPS37B-202ENST00000371248 MRPL12P52815 198 aaKnown RBP20.22■□□□□ 0.83
VPS37B-202ENST00000371248 PKP1Q13835 747 aa20.22■□□□□ 0.83
VPS37B-202ENST00000371248 SAFBQ15424 915 aaKnown RBP eCLIP20.22■□□□□ 0.83
VPS37B-202ENST00000371248 NPY5RQ15761 445 aa20.22■□□□□ 0.83
VPS37B-202ENST00000371248 MCF2L2Q86YR7 1114 aa20.22■□□□□ 0.83
VPS37B-202ENST00000371248 CCAR1Q8IX12 1150 aaKnown RBP20.22■□□□□ 0.83
VPS37B-202ENST00000371248 MROH8Q9H579 483 aa20.22■□□□□ 0.83
VPS37B-202ENST00000371248 EFCC1Q9HA90 598 aa20.22■□□□□ 0.83
VPS37B-202ENST00000371248 MCTP1Q6DN14 999 aa20.22■□□□□ 0.83
VPS37B-202ENST00000371248 GALNT17Q6IS24 598 aa20.22■□□□□ 0.83
VPS37B-202ENST00000371248 USP17L6PQ6QN14 398 aa20.22■□□□□ 0.83
VPS37B-202ENST00000371248 NSMFQ6X4W1 530 aa20.22■□□□□ 0.83
VPS37B-202ENST00000371248 DIS3L2Q8IYB7 885 aaKnown RBP20.22■□□□□ 0.83
VPS37B-202ENST00000371248 BLIDQ8IZY5 108 aa20.22■□□□□ 0.83
VPS37B-202ENST00000371248 RGS22Q8NE09 1264 aa20.22■□□□□ 0.83
VPS37B-202ENST00000371248 SHCBP1Q8NEM2 672 aa20.22■□□□□ 0.83
VPS37B-202ENST00000371248 OXER1Q8TDS5 423 aa20.22■□□□□ 0.83
VPS37B-202ENST00000371248 FBXO40Q9UH90 709 aa20.22■□□□□ 0.83
VPS37B-202ENST00000371248 MTMR6Q9Y217 621 aa20.22■□□□□ 0.83
VPS37B-202ENST00000371248 BTBD18B2RXH4 712 aa20.21■□□□□ 0.83
VPS37B-202ENST00000371248 PDIA4P13667 645 aaKnown RBP20.21■□□□□ 0.83
VPS37B-202ENST00000371248 KRT2P35908 639 aa20.21■□□□□ 0.83
VPS37B-202ENST00000371248 UBE2SQ16763 222 aa20.21■□□□□ 0.83
VPS37B-202ENST00000371248 BICD2Q8TD16 824 aa20.21■□□□□ 0.83
VPS37B-202ENST00000371248 CFHR5Q9BXR6 569 aa20.21■□□□□ 0.83
VPS37B-202ENST00000371248 GLT8D2Q9H1C3 349 aa20.21■□□□□ 0.83
VPS37B-202ENST00000371248 BRMS1Q9HCU9 246 aa20.21■□□□□ 0.83
VPS37B-202ENST00000371248 BIN2Q9UBW5 565 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms