RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 IRX5P78411 483 aaPredicted RBP17.89■□□□□ 0.45
RPF1-202ENST00000370656 TNFAIP2Q03169 654 aa17.89■□□□□ 0.45
RPF1-202ENST00000370656 PLEKHM2Q8IWE5 1019 aa17.89■□□□□ 0.45
RPF1-202ENST00000370656 ADAMTS19Q8TE59 1207 aa17.89■□□□□ 0.45
RPF1-202ENST00000370656 MKL1Q969V6 931 aa17.89■□□□□ 0.45
RPF1-202ENST00000370656 FAM122AQ96E09 287 aa17.89■□□□□ 0.45
RPF1-202ENST00000370656 TRANK1O15050 2925 aa17.88■□□□□ 0.45
RPF1-202ENST00000370656 ZEB2O60315 1214 aa17.88■□□□□ 0.45
RPF1-202ENST00000370656 TTLL1O95922 423 aa17.88■□□□□ 0.45
RPF1-202ENST00000370656 CD4P01730 458 aa17.88■□□□□ 0.45
RPF1-202ENST00000370656 CYP2C18P33260 490 aa17.88■□□□□ 0.45
RPF1-202ENST00000370656 NKX3-2P78367 333 aa17.88■□□□□ 0.45
RPF1-202ENST00000370656 GMCL1P1Q8NEA9 526 aa17.88■□□□□ 0.45
RPF1-202ENST00000370656 FGD4Q96M96 766 aa17.88■□□□□ 0.45
RPF1-202ENST00000370656 AP5M1Q9H0R1 490 aa17.88■□□□□ 0.45
RPF1-202ENST00000370656 HIPK3Q9H422 1215 aa17.88■□□□□ 0.45
RPF1-202ENST00000370656 ACAD9Q9H845 621 aa17.88■□□□□ 0.45
RPF1-202ENST00000370656 HOMER2Q9NSB8 354 aa17.88■□□□□ 0.45
RPF1-202ENST00000370656 TCF20Q9UGU0 1960 aaKnown RBP17.88■□□□□ 0.45
RPF1-202ENST00000370656 ASB14A6NK59 587 aa17.87■□□□□ 0.45
RPF1-202ENST00000370656 GSG1L2A8MUP6 293 aa17.87■□□□□ 0.45
RPF1-202ENST00000370656 GNAT2P19087 354 aa17.87■□□□□ 0.45
RPF1-202ENST00000370656 TDO2P48775 406 aa17.87■□□□□ 0.45
RPF1-202ENST00000370656 CCDC85BQ15834 202 aaPredicted RBP17.87■□□□□ 0.45
RPF1-202ENST00000370656 C8orf34Q49A92 452 aa17.87■□□□□ 0.45
RPF1-202ENST00000370656 BMP2KLQ5H9B9 411 aa17.87■□□□□ 0.45
RPF1-202ENST00000370656 MTMR4Q9NYA4 1195 aa17.87■□□□□ 0.45
RPF1-202ENST00000370656 ISY1Q9ULR0 285 aaKnown RBP17.87■□□□□ 0.45
RPF1-202ENST00000370656 IGKV6D-41A0A0C4DH26 115 aa17.86■□□□□ 0.45
RPF1-202ENST00000370656 APPP05067 770 aa17.86■□□□□ 0.45
RPF1-202ENST00000370656 BMP3P12645 472 aa17.86■□□□□ 0.45
RPF1-202ENST00000370656 BEX3Q00994 111 aa17.86■□□□□ 0.45
RPF1-202ENST00000370656 ITGA7Q13683 1181 aa17.86■□□□□ 0.45
RPF1-202ENST00000370656 CXCL17Q6UXB2 119 aa17.86■□□□□ 0.45
RPF1-202ENST00000370656 TLK2Q86UE8 772 aa17.86■□□□□ 0.45
RPF1-202ENST00000370656 RPUSD2Q8IZ73 545 aaKnown RBP17.86■□□□□ 0.45
RPF1-202ENST00000370656 SLC43A3Q8NBI5 491 aa17.86■□□□□ 0.45
RPF1-202ENST00000370656 CHURC1Q8WUH1 139 aa17.86■□□□□ 0.45
RPF1-202ENST00000370656 CEP95Q96GE4 821 aa17.86■□□□□ 0.45
RPF1-202ENST00000370656 UHRF1Q96T88 793 aaPredicted RBP17.86■□□□□ 0.45
RPF1-202ENST00000370656 KATNBL1Q9H079 304 aa17.86■□□□□ 0.45
RPF1-202ENST00000370656 NKX2-4Q9H2Z4 354 aa17.86■□□□□ 0.45
RPF1-202ENST00000370656 ZBTB47Q9UFB7 747 aaPredicted RBP17.86■□□□□ 0.45
RPF1-202ENST00000370656 REV3LO60673 3130 aa17.85■□□□□ 0.45
RPF1-202ENST00000370656 CTAGE5O15320 804 aa17.85■□□□□ 0.45
RPF1-202ENST00000370656 STAT2P52630 851 aa17.85■□□□□ 0.45
RPF1-202ENST00000370656 CNTN2Q02246 1040 aa17.85■□□□□ 0.45
RPF1-202ENST00000370656 IKQ13123 557 aaPredicted RBP17.85■□□□□ 0.45
RPF1-202ENST00000370656 ADGRE1Q14246 886 aa17.85■□□□□ 0.45
RPF1-202ENST00000370656 FSCN1Q16658 493 aaKnown RBP17.85■□□□□ 0.45
RPF1-202ENST00000370656 TKFCQ3LXA3 575 aa17.85■□□□□ 0.45
RPF1-202ENST00000370656 SLFN13Q68D06 897 aa17.85■□□□□ 0.45
RPF1-202ENST00000370656 OTOP2Q7RTS6 562 aa17.85■□□□□ 0.45
RPF1-202ENST00000370656 LRRC47Q8N1G4 583 aaKnown RBP17.85■□□□□ 0.45
RPF1-202ENST00000370656 FAM133AQ8N9E0 248 aa17.85■□□□□ 0.45
RPF1-202ENST00000370656 KBTBD3Q8NAB2 608 aa17.85■□□□□ 0.45
RPF1-202ENST00000370656 APPBP2Q92624 585 aa17.85■□□□□ 0.45
RPF1-202ENST00000370656 GPATCH3Q96I76 525 aa17.85■□□□□ 0.45
RPF1-202ENST00000370656 ECHDC1Q9NTX5 307 aa17.85■□□□□ 0.45
RPF1-202ENST00000370656 CXXC1Q9P0U4 656 aaPredicted RBP17.85■□□□□ 0.45
RPF1-202ENST00000370656 TMEM232C9JQI7 657 aa17.84■□□□□ 0.45
RPF1-202ENST00000370656 SMARCA5O60264 1052 aaPredicted RBP17.84■□□□□ 0.45
RPF1-202ENST00000370656 PRDM1O75626 825 aa17.84■□□□□ 0.45
RPF1-202ENST00000370656 ZFYP08048 801 aaPredicted RBP17.84■□□□□ 0.45
RPF1-202ENST00000370656 SLC3A2P08195 630 aaKnown RBP17.84■□□□□ 0.45
RPF1-202ENST00000370656 TSPY3P0CV98 308 aa17.84■□□□□ 0.45
RPF1-202ENST00000370656 TSPY8P0CW00 308 aa17.84■□□□□ 0.45
RPF1-202ENST00000370656 PDE4BQ07343 736 aa17.84■□□□□ 0.45
RPF1-202ENST00000370656 LRRFIP1Q32MZ4 808 aaKnown RBP17.84■□□□□ 0.45
RPF1-202ENST00000370656 FAM160B2Q86V87 743 aa17.84■□□□□ 0.45
RPF1-202ENST00000370656 RNF146Q9NTX7 359 aa17.84■□□□□ 0.45
RPF1-202ENST00000370656 GNEQ9Y223 722 aaKnown RBP17.84■□□□□ 0.45
RPF1-202ENST00000370656 SLC4A7Q9Y6M7 1214 aa17.84■□□□□ 0.45
RPF1-202ENST00000370656 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.83■□□□□ 0.44
RPF1-202ENST00000370656 RNF113AO15541 343 aaKnown RBP17.83■□□□□ 0.44
RPF1-202ENST00000370656 AAK1Q2M2I8 961 aa17.83■□□□□ 0.44
RPF1-202ENST00000370656 PPP4R3BQ5MIZ7 849 aa17.83■□□□□ 0.44
RPF1-202ENST00000370656 PPP2R2DQ66LE6 453 aa17.83■□□□□ 0.44
RPF1-202ENST00000370656 IQSEC1Q6DN90 963 aa17.83■□□□□ 0.44
RPF1-202ENST00000370656 PIP4P2Q8N4L2 257 aa17.83■□□□□ 0.44
RPF1-202ENST00000370656 OSBP2Q969R2 916 aa17.83■□□□□ 0.44
RPF1-202ENST00000370656 NACAP1Q9BZK3 213 aa17.83■□□□□ 0.44
RPF1-202ENST00000370656 A1CFQ9NQ94 594 aaKnown RBP17.83■□□□□ 0.44
RPF1-202ENST00000370656 Q9Y3F1 56 aa17.83■□□□□ 0.44
RPF1-202ENST00000370656 PLIN4Q96Q06 1357 aa17.82■□□□□ 0.44
RPF1-202ENST00000370656 ASTN1O14525 1302 aa17.82■□□□□ 0.44
RPF1-202ENST00000370656 LRRC37A2A6NM11 1700 aa17.82■□□□□ 0.44
RPF1-202ENST00000370656 DYNC1LI2O43237 492 aaPredicted RBP17.82■□□□□ 0.44
RPF1-202ENST00000370656 GPAA1O43292 621 aa17.82■□□□□ 0.44
RPF1-202ENST00000370656 SLC1A4P43007 532 aa17.82■□□□□ 0.44
RPF1-202ENST00000370656 PDE1AP54750 535 aa17.82■□□□□ 0.44
RPF1-202ENST00000370656 CCL23P55773 120 aa17.82■□□□□ 0.44
RPF1-202ENST00000370656 NEDD1Q8NHV4 660 aa17.82■□□□□ 0.44
RPF1-202ENST00000370656 STAG1Q8WVM7 1258 aa17.82■□□□□ 0.44
RPF1-202ENST00000370656 GMCL1Q96IK5 515 aa17.82■□□□□ 0.44
RPF1-202ENST00000370656 TRERF1Q96PN7 1200 aa17.82■□□□□ 0.44
RPF1-202ENST00000370656 NOC4LQ9BVI4 516 aaKnown RBP17.82■□□□□ 0.44
RPF1-202ENST00000370656 YBX2Q9Y2T7 364 aaKnown RBP17.82■□□□□ 0.44
RPF1-202ENST00000370656 PCDHA11Q9Y5I1 949 aa17.82■□□□□ 0.44
RPF1-202ENST00000370656 XIRP2A4UGR9 3374 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms