RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 NELFCDQ8IXH7 590 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 SPATA5Q8NB90 893 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 CPVLQ9H3G5 476 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 RBM12Q9NTZ6 932 aaKnown RBP11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 STIM2Q9P246 746 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 PTPRUQ92729 1446 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 GCKP35557 465 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 DNM2P50570 870 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 PMS1P54277 932 aaKnown RBP11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 MAP2K1Q02750 393 aaPredicted RBP11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 TEX2Q8IWB9 1127 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 TMTC2Q8N394 836 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 FERMT2Q96AC1 680 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 THOC1Q96FV9 657 aaKnown RBP11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 KLC4Q9NSK0 619 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 HAUS2Q9NVX0 235 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 HYOU1Q9Y4L1 999 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 MEFVO15553 781 aaPredicted RBP11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 PDHBP11177 359 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 TXKP42681 527 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 EPHB4P54760 987 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 FAM133BQ5BKY9 247 aaKnown RBP11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 TRMT1LQ7Z2T5 733 aaKnown RBP11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 CCDC25Q86WR0 208 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 DCAF5Q96JK2 942 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 NOX5Q96PH1 765 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 CCT8L2Q96SF2 557 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 PRDM11Q9NQV5 511 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 FAM217BQ9NTX9 383 aaPredicted RBP11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 NOVA2Q9UNW9 492 aaKnown RBP11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 PCDHA13Q9Y5I0 950 aa11.55□□□□□ -0.56
PRPF38B-201ENST00000370021 CEMIPQ8WUJ3 1361 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 TRAF5O00463 557 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 GTPBP6O43824 516 aaPredicted RBP11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 GOLGA8HP0CJ92 632 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 LSP1P33241 339 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 ADCY1Q08828 1119 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 PAK2Q13177 524 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 NEDD9Q14511 834 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 NTRK3Q16288 839 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 RABL6Q3YEC7 729 aaPredicted RBP11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 OSBPL9Q96SU4 736 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 RWDD2AQ9UIY3 292 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 FAM153BP0C7A2 387 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 TRADDQ15628 312 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 SNCBQ16143 134 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 FAM153CQ494X1 144 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 ZNF658Q5TYW1 1059 aaPredicted RBP11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 WDR93Q6P2C0 686 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 DNAJC10Q8IXB1 793 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 TEX11Q8IYF3 940 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 CCDC155Q8N6L0 562 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 RPGRIP1Q96KN7 1286 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 FAM153AQ9UHL3 310 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 PLAAQ9Y263 795 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 REXO2Q9Y3B8 237 aaKnown RBP11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 CD2APQ9Y5K6 639 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 PALLDQ8WX93 1383 aa11.54□□□□□ -0.56
PRPF38B-201ENST00000370021 TECP42680 631 aa11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 KIF11P52732 1056 aa11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 SPAG5Q96R06 1193 aa11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 MKNK2Q9HBH9 465 aa11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 PXDNLA1KZ92 1463 aa11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 USP17L12C9JPN9 530 aa11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 USP17L21D6R901 530 aa11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 FCER1AP12319 257 aa11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 TBC1D1Q86TI0 1168 aaPredicted RBP11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 LUC7LQ9NQ29 371 aaKnown RBP11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 AATFQ9NY61 560 aaKnown RBP eCLIP11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 KDM3BQ7LBC6 1761 aa11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 MAGEB6P1A0A0J9YX57 407 aa11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 PHF20L1A8MW92 1017 aa11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 CHUKO15111 745 aa11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 CYP27B1O15528 508 aa11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 MYBL1P10243 752 aa11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 SARSP49591 514 aaKnown RBP11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 DYNLL1P63167 89 aaKnown RBP11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 KIAA0753Q2KHM9 967 aa11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 LRCH2Q5VUJ6 765 aa11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 NLRP14Q86W24 1093 aa11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 ZNF473Q8WTR7 871 aaKnown RBP11.53□□□□□ -0.56
PRPF38B-201ENST00000370021 A0A1B0GUA9 196 aa11.52□□□□□ -0.56
PRPF38B-201ENST00000370021 SLCO1A2P46721 670 aa11.52□□□□□ -0.56
PRPF38B-201ENST00000370021 MKRN4PQ13434 485 aaPredicted RBP11.52□□□□□ -0.56
PRPF38B-201ENST00000370021 PAIP2Q9BPZ3 127 aaKnown RBP11.52□□□□□ -0.56
PRPF38B-201ENST00000370021 YY1AP1Q9H869 796 aa11.52□□□□□ -0.56
PRPF38B-201ENST00000370021 AGPSO00116 658 aa11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 UTYO14607 1347 aa11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 CLGNO14967 610 aa11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 FOXP2O15409 715 aa11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 CCNT1O60563 726 aaKnown RBP11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 XDHP47989 1333 aa11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 MED1Q15648 1581 aaPredicted RBP11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 CACNA2D3Q8IZS8 1091 aa11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 CEP89Q96ST8 783 aa11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 LBHD1Q9BQE6 289 aaPredicted RBP11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 ADAMTS1Q9UHI8 967 aa11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 LGALS16A8MUM7 142 aa11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 PRPF6O94906 941 aaKnown RBP11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 UQCRFS1P1P0C7P4 283 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms