RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 GNGT1P63211 74 aa17.15■□□□□ 0.34
SEMA6C-202ENST00000368912 SSRP1Q08945 709 aaKnown RBP17.15■□□□□ 0.34
SEMA6C-202ENST00000368912 CCDC40Q4G0X9 1142 aa17.15■□□□□ 0.34
SEMA6C-202ENST00000368912 B4GALNT2Q8NHY0 566 aa17.15■□□□□ 0.34
SEMA6C-202ENST00000368912 RIN2Q8WYP3 895 aaPredicted RBP17.15■□□□□ 0.34
SEMA6C-202ENST00000368912 CNNM2Q9H8M5 875 aa17.15■□□□□ 0.34
SEMA6C-202ENST00000368912 UBR2Q8IWV8 1755 aa17.15■□□□□ 0.34
SEMA6C-202ENST00000368912 ICA1Q05084 483 aa17.15■□□□□ 0.34
SEMA6C-202ENST00000368912 STX1AQ16623 288 aa17.15■□□□□ 0.34
SEMA6C-202ENST00000368912 APOA5Q6Q788 366 aa17.15■□□□□ 0.34
SEMA6C-202ENST00000368912 MB21D2Q8IYB1 491 aaPredicted RBP17.15■□□□□ 0.34
SEMA6C-202ENST00000368912 TBC1D31Q96DN5 1066 aa17.15■□□□□ 0.34
SEMA6C-202ENST00000368912 UBA5Q9GZZ9 404 aa17.15■□□□□ 0.34
SEMA6C-202ENST00000368912 ATP2C2O75185 946 aa17.15■□□□□ 0.34
SEMA6C-202ENST00000368912 CDKL5O76039 1030 aa17.15■□□□□ 0.34
SEMA6C-202ENST00000368912 PDHBP11177 359 aa17.15■□□□□ 0.34
SEMA6C-202ENST00000368912 CDC27P30260 824 aa17.15■□□□□ 0.34
SEMA6C-202ENST00000368912 CCDC84Q86UT8 332 aaPredicted RBP17.15■□□□□ 0.34
SEMA6C-202ENST00000368912 IGSF22Q8N9C0 903 aa17.15■□□□□ 0.34
SEMA6C-202ENST00000368912 TCHHQ07283 1943 aa17.14■□□□□ 0.34
SEMA6C-202ENST00000368912 FRMPD2Q68DX3 1309 aaPredicted RBP17.14■□□□□ 0.33
SEMA6C-202ENST00000368912 TPP2P29144 1249 aaPredicted RBP17.14■□□□□ 0.33
SEMA6C-202ENST00000368912 CRKP46108 304 aa17.14■□□□□ 0.33
SEMA6C-202ENST00000368912 STK38Q15208 465 aa17.14■□□□□ 0.33
SEMA6C-202ENST00000368912 ZNF654Q8IZM8 581 aa17.14■□□□□ 0.33
SEMA6C-202ENST00000368912 DDX20Q9UHI6 824 aaKnown RBP17.14■□□□□ 0.33
SEMA6C-202ENST00000368912 POTEB2H3BUK9 544 aa17.14■□□□□ 0.33
SEMA6C-202ENST00000368912 RTN2O75298 545 aa17.14■□□□□ 0.33
SEMA6C-202ENST00000368912 B4GALNT4Q76KP1 1039 aa17.14■□□□□ 0.33
SEMA6C-202ENST00000368912 NLGN2Q8NFZ4 835 aa17.14■□□□□ 0.33
SEMA6C-202ENST00000368912 MTMR6Q9Y217 621 aa17.14■□□□□ 0.33
SEMA6C-202ENST00000368912 TACC3Q9Y6A5 838 aa17.14■□□□□ 0.33
SEMA6C-202ENST00000368912 SEMA3EO15041 775 aa17.14■□□□□ 0.33
SEMA6C-202ENST00000368912 HOXA10P31260 410 aaPredicted RBP17.14■□□□□ 0.33
SEMA6C-202ENST00000368912 GNPTABQ3T906 1256 aa17.14■□□□□ 0.33
SEMA6C-202ENST00000368912 TBC1D10BQ4KMP7 808 aaPredicted RBP17.14■□□□□ 0.33
SEMA6C-202ENST00000368912 ZFPM1Q8IX07 1006 aa17.14■□□□□ 0.33
SEMA6C-202ENST00000368912 ZNF512BQ96KM6 892 aaPredicted RBP17.14■□□□□ 0.33
SEMA6C-202ENST00000368912 VPS54Q9P1Q0 977 aa17.14■□□□□ 0.33
SEMA6C-202ENST00000368912 ZEB2O60315 1214 aa17.13■□□□□ 0.33
SEMA6C-202ENST00000368912 DLGAP5Q15398 846 aa17.13■□□□□ 0.33
SEMA6C-202ENST00000368912 SAFBQ15424 915 aaKnown RBP eCLIP17.13■□□□□ 0.33
SEMA6C-202ENST00000368912 ARMCX5Q6P1M9 558 aa17.13■□□□□ 0.33
SEMA6C-202ENST00000368912 SPICE1Q8N0Z3 855 aa17.13■□□□□ 0.33
SEMA6C-202ENST00000368912 NSUN7Q8NE18 718 aaKnown RBP17.13■□□□□ 0.33
SEMA6C-202ENST00000368912 XPO4Q9C0E2 1151 aaKnown RBP17.13■□□□□ 0.33
SEMA6C-202ENST00000368912 COL4A1P02462 1669 aa17.13■□□□□ 0.33
SEMA6C-202ENST00000368912 SARM1Q6SZW1 724 aa17.13■□□□□ 0.33
SEMA6C-202ENST00000368912 WDR24Q96S15 920 aa17.13■□□□□ 0.33
SEMA6C-202ENST00000368912 GOLGA6CA6NDK9 693 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 GOLGA6DP0CG33 693 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 ARHGAP25P42331 645 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 RAB27AP51159 221 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 ZSCAN10Q96SZ4 725 aaPredicted RBP17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 GOLGA6AQ9NYA3 693 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 C4BP0C0L5 1744 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 HLA-DOAP06340 250 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 MYBL1P10243 752 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 CDC25CP30307 473 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 CFAP100Q494V2 611 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 SPECC1Q5M775 1068 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 DRAXINQ8NBI3 349 aaPredicted RBP17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 RASSF8Q8NHQ8 419 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 MROH7-TTC4A0A0A0MT08 1334 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 GOLGA6L7A0A1B0GV03 622 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 PSMD14O00487 310 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 PLEKHA8P1O95397 391 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 EXOSC10Q01780 885 aaKnown RBP17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 GOLGA8FQ08AF8 430 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 GOLGA8DPQ0D2H9 430 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 MICALCLQ6ZW33 695 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 CAPS2Q9BXY5 557 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 L1RE1Q9UN81 338 aa17.12■□□□□ 0.33
SEMA6C-202ENST00000368912 RTL9Q8NET4 1388 aa17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 OATP04181 439 aa17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 IRAK1P51617 712 aa17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 KIF4BQ2VIQ3 1234 aa17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 TSGA10Q9BZW7 698 aa17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 ZCWPW1Q9H0M4 648 aa17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 FZD1Q9UP38 647 aa17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 SH2B2O14492 632 aaPredicted RBP17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 PYGBP11216 843 aa17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 SHROOM1Q2M3G4 852 aaPredicted RBP17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 EZH1Q92800 747 aaPredicted RBP17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 GPKOWQ92917 476 aaPredicted RBP eCLIP17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 ANO10Q9NW15 660 aa17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 COL1A1P02452 1464 aaPredicted RBP17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 PFKFB2O60825 505 aa17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 GUCY1A2P33402 732 aa17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 SNAP25P60880 206 aa17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 SLC30A9Q6PML9 568 aa17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 HEATR3Q7Z4Q2 680 aa17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 TRIM4Q9C037 500 aa17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 TAOK3Q9H2K8 898 aa17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 LMCD1Q9NZU5 365 aa17.11■□□□□ 0.33
SEMA6C-202ENST00000368912 BUB1BO60566 1050 aaPredicted RBP17.1■□□□□ 0.33
SEMA6C-202ENST00000368912 USP17L2Q6R6M4 530 aa17.1■□□□□ 0.33
SEMA6C-202ENST00000368912 RINLQ6ZS11 566 aa17.1■□□□□ 0.33
SEMA6C-202ENST00000368912 RSRC2Q7L4I2 434 aaKnown RBP17.1■□□□□ 0.33
SEMA6C-202ENST00000368912 ENAHQ8N8S7 591 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms