RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 DRAXINQ8NBI3 349 aaPredicted RBP11.19□□□□□ -0.62
SCNM1-202ENST00000368905 NLRP3Q96P20 1036 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 EIF2AK1Q9BQI3 630 aaKnown RBP11.19□□□□□ -0.62
SCNM1-202ENST00000368905 FSD1Q9BTV5 496 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 SIL1Q9H173 461 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 CNNM2Q9H8M5 875 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 FANCFQ9NPI8 374 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 ETAA1Q9NY74 926 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 CYP46A1Q9Y6A2 500 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 SLC30A1Q9Y6M5 507 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 CCDC171Q6TFL3 1326 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 UBR2Q8IWV8 1755 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 IMPDH2P12268 514 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 ATP5JP18859 108 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 KRT83P78385 493 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 MRPS35P82673 323 aaKnown RBP11.19□□□□□ -0.62
SCNM1-202ENST00000368905 APBA1Q02410 837 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 VPS53Q5VIR6 699 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 C1orf122Q6ZSJ8 110 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 HOMER1Q86YM7 354 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 ZNF654Q8IZM8 581 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 ZNF710Q8N1W2 664 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 AKT1S1Q96B36 256 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 DNAI2Q9GZS0 605 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 CCDC8Q9H0W5 538 aaPredicted RBP11.19□□□□□ -0.62
SCNM1-202ENST00000368905 LMBRD1Q9NUN5 540 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 SEPT10Q9P0V9 454 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 ATP6V1DQ9Y5K8 247 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 AKAP10O43572 662 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 CDKL5O76039 1030 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 RXRGP48443 463 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 ZBTB17Q13105 803 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 MOGSQ13724 837 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 ANKRD1Q15327 319 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 PACS1Q6VY07 963 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 NEK10Q6ZWH5 1172 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 BEND5Q7L4P6 421 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 TMC4Q7Z404 712 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 SAPCD2Q86UD0 394 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 DCLK2Q8N568 766 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 ZMAT2Q96NC0 199 aaKnown RBP11.18□□□□□ -0.62
SCNM1-202ENST00000368905 DEPDC7Q96QD5 511 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 HMG20BQ9P0W2 317 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 AFG3L2Q9Y4W6 797 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 CCDC66A2RUB6 948 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 NUTM2BA6NNL0 878 aaPredicted RBP11.18□□□□□ -0.62
SCNM1-202ENST00000368905 NUTM2EB1AL46 878 aaPredicted RBP11.18□□□□□ -0.62
SCNM1-202ENST00000368905 H7C1W4 665 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 TMCC2O75069 709 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 CLASP2O75122 1294 aaKnown RBP11.18□□□□□ -0.62
SCNM1-202ENST00000368905 CASTP20810 708 aaKnown RBP11.18□□□□□ -0.62
SCNM1-202ENST00000368905 GUCY2CP25092 1073 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 ZNF445P59923 1031 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 PTPN12Q05209 780 aaKnown RBP11.18□□□□□ -0.62
SCNM1-202ENST00000368905 TNNI3KQ59H18 835 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 LRRC49Q8IUZ0 686 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 NUTM2AQ8IVF1 878 aaPredicted RBP11.18□□□□□ -0.62
SCNM1-202ENST00000368905 CCDC65Q8IXS2 484 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 TRIM22Q8IYM9 498 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 LILRB1Q8NHL6 650 aaPredicted RBP11.18□□□□□ -0.62
SCNM1-202ENST00000368905 IL25Q9H293 177 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 GPR108Q9NPR9 543 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 ZDHHC9Q9Y397 364 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 C2CD2Q9Y426 696 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 FPGT-TNNI3KV9GXZ4 949 aa11.18□□□□□ -0.62
SCNM1-202ENST00000368905 USP17L8P0C7I0 530 aa11.17□□□□□ -0.62
SCNM1-202ENST00000368905 RFX5P48382 616 aaPredicted RBP11.17□□□□□ -0.62
SCNM1-202ENST00000368905 PAK2Q13177 524 aa11.17□□□□□ -0.62
SCNM1-202ENST00000368905 PICALMQ13492 652 aa11.17□□□□□ -0.62
SCNM1-202ENST00000368905 PKP1Q13835 747 aa11.17□□□□□ -0.62
SCNM1-202ENST00000368905 KRT32Q14532 448 aa11.17□□□□□ -0.62
SCNM1-202ENST00000368905 ECM1Q16610 540 aa11.17□□□□□ -0.62
SCNM1-202ENST00000368905 EPHA10Q5JZY3 1008 aa11.17□□□□□ -0.62
SCNM1-202ENST00000368905 PRPF40BQ6NWY9 871 aaKnown RBP11.17□□□□□ -0.62
SCNM1-202ENST00000368905 NCAPG2Q86XI2 1143 aa11.17□□□□□ -0.62
SCNM1-202ENST00000368905 DDX42Q86XP3 938 aaKnown RBP eCLIP11.17□□□□□ -0.62
SCNM1-202ENST00000368905 MYLK4Q86YV6 388 aaPredicted RBP11.17□□□□□ -0.62
SCNM1-202ENST00000368905 MAP4K1Q92918 833 aa11.17□□□□□ -0.62
SCNM1-202ENST00000368905 ARHGEF2Q92974 986 aaKnown RBP11.17□□□□□ -0.62
SCNM1-202ENST00000368905 C1orf74Q96LT6 269 aa11.17□□□□□ -0.62
SCNM1-202ENST00000368905 HAUS7Q99871 368 aa11.17□□□□□ -0.62
SCNM1-202ENST00000368905 BOLA2Q9H3K6 86 aa11.17□□□□□ -0.62
SCNM1-202ENST00000368905 TCF7L2Q9NQB0 619 aa11.17□□□□□ -0.62
SCNM1-202ENST00000368905 RRAGDQ9NQL2 400 aaPredicted RBP11.17□□□□□ -0.62
SCNM1-202ENST00000368905 PAPPAQ13219 1627 aa11.16□□□□□ -0.62
SCNM1-202ENST00000368905 ATP5J2-PTCD1G3V325 749 aa11.16□□□□□ -0.62
SCNM1-202ENST00000368905 RTCAO00442 366 aaKnown RBP11.16□□□□□ -0.62
SCNM1-202ENST00000368905 PTCD1O75127 700 aaKnown RBP11.16□□□□□ -0.62
SCNM1-202ENST00000368905 RASGRP1O95267 797 aa11.16□□□□□ -0.62
SCNM1-202ENST00000368905 PYGBP11216 843 aa11.16□□□□□ -0.62
SCNM1-202ENST00000368905 AK2P54819 239 aa11.16□□□□□ -0.62
SCNM1-202ENST00000368905 CASP7P55210 303 aa11.16□□□□□ -0.62
SCNM1-202ENST00000368905 NMIQ13287 307 aaPredicted RBP11.16□□□□□ -0.62
SCNM1-202ENST00000368905 NECTIN1Q15223 517 aa11.16□□□□□ -0.62
SCNM1-202ENST00000368905 SHROOM1Q2M3G4 852 aaPredicted RBP11.16□□□□□ -0.62
SCNM1-202ENST00000368905 MAP7D1Q3KQU3 841 aa11.16□□□□□ -0.62
SCNM1-202ENST00000368905 RRP12Q5JTH9 1297 aaKnown RBP11.16□□□□□ -0.62
SCNM1-202ENST00000368905 SPATA18Q8TC71 538 aa11.16□□□□□ -0.62
SCNM1-202ENST00000368905 BICD2Q8TD16 824 aa11.16□□□□□ -0.62
SCNM1-202ENST00000368905 MGARPQ8TDB4 240 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms