RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 ASIC4Q96FT7 647 aa12.72□□□□□ -0.37
TUBE1-201ENST00000368657 CRBNQ96SW2 442 aa12.72□□□□□ -0.37
TUBE1-201ENST00000368657 RAI14Q9P0K7 980 aa12.72□□□□□ -0.37
TUBE1-201ENST00000368657 ADAMTS5Q9UNA0 930 aa12.72□□□□□ -0.37
TUBE1-201ENST00000368657 DNAH14Q0VDD8 3507 aa12.71□□□□□ -0.37
TUBE1-201ENST00000368657 GVINP1Q7Z2Y8 2422 aa12.71□□□□□ -0.37
TUBE1-201ENST00000368657 VAMP4O75379 141 aa12.71□□□□□ -0.37
TUBE1-201ENST00000368657 GJB5O95377 273 aa12.71□□□□□ -0.37
TUBE1-201ENST00000368657 CHRM1P11229 460 aaPredicted RBP12.71□□□□□ -0.37
TUBE1-201ENST00000368657 CYP2C9P11712 490 aa12.71□□□□□ -0.37
TUBE1-201ENST00000368657 LTBRP36941 435 aa12.71□□□□□ -0.37
TUBE1-201ENST00000368657 RFX5P48382 616 aaPredicted RBP12.71□□□□□ -0.37
TUBE1-201ENST00000368657 WDR5P61964 334 aaKnown RBP12.71□□□□□ -0.37
TUBE1-201ENST00000368657 TCEAL5Q5H9L2 206 aa12.71□□□□□ -0.37
TUBE1-201ENST00000368657 FRMD5Q7Z6J6 570 aa12.71□□□□□ -0.37
TUBE1-201ENST00000368657 NSUN3Q9H649 340 aaKnown RBP12.71□□□□□ -0.37
TUBE1-201ENST00000368657 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.71□□□□□ -0.37
TUBE1-201ENST00000368657 ACACBO00763 2458 aa12.7□□□□□ -0.38
TUBE1-201ENST00000368657 CDK5RAP2Q96SN8 1893 aa12.7□□□□□ -0.38
TUBE1-201ENST00000368657 VPS13AQ96RL7 3174 aa12.7□□□□□ -0.38
TUBE1-201ENST00000368657 TNFAIP2Q03169 654 aa12.7□□□□□ -0.38
TUBE1-201ENST00000368657 SMAD4Q13485 552 aaKnown RBP12.7□□□□□ -0.38
TUBE1-201ENST00000368657 FSCN1Q16658 493 aaKnown RBP12.7□□□□□ -0.38
TUBE1-201ENST00000368657 CTC1Q2NKJ3 1217 aa12.7□□□□□ -0.38
TUBE1-201ENST00000368657 SAMD11Q96NU1 681 aa12.7□□□□□ -0.38
TUBE1-201ENST00000368657 AP5M1Q9H0R1 490 aa12.7□□□□□ -0.38
TUBE1-201ENST00000368657 AATFQ9NY61 560 aaKnown RBP eCLIP12.7□□□□□ -0.38
TUBE1-201ENST00000368657 SERPINB13Q9UIV8 391 aa12.7□□□□□ -0.38
TUBE1-201ENST00000368657 NCOR2Q9Y618 2525 aa12.7□□□□□ -0.38
TUBE1-201ENST00000368657 DMXL1Q9Y485 3027 aa12.7□□□□□ -0.38
TUBE1-201ENST00000368657 SIP14410 1827 aa12.69□□□□□ -0.38
TUBE1-201ENST00000368657 DNAJC25-GNG10A0A024R161 153 aa12.69□□□□□ -0.38
TUBE1-201ENST00000368657 LOC730098B7Z3J9 87 aa12.69□□□□□ -0.38
TUBE1-201ENST00000368657 ADORA1P30542 326 aa12.69□□□□□ -0.38
TUBE1-201ENST00000368657 CBX2Q14781 532 aaPredicted RBP12.69□□□□□ -0.38
TUBE1-201ENST00000368657 LRRFIP1Q32MZ4 808 aaKnown RBP12.69□□□□□ -0.38
TUBE1-201ENST00000368657 NOL8Q76FK4 1167 aaKnown RBP12.69□□□□□ -0.38
TUBE1-201ENST00000368657 RPAINQ86UA6 219 aa12.69□□□□□ -0.38
TUBE1-201ENST00000368657 EHD4Q9H223 541 aa12.69□□□□□ -0.38
TUBE1-201ENST00000368657 TRMT13Q9NUP7 481 aaKnown RBP12.69□□□□□ -0.38
TUBE1-201ENST00000368657 SAP30BPQ9UHR5 308 aaKnown RBP12.69□□□□□ -0.38
TUBE1-201ENST00000368657 INSL6Q9Y581 213 aa12.69□□□□□ -0.38
TUBE1-201ENST00000368657 SCN5AQ14524 2016 aa12.69□□□□□ -0.38
TUBE1-201ENST00000368657 ZNF292O60281 2723 aa12.68□□□□□ -0.38
TUBE1-201ENST00000368657 A0A1W2PRG0 241 aa12.68□□□□□ -0.38
TUBE1-201ENST00000368657 H3BNC9 293 aa12.68□□□□□ -0.38
TUBE1-201ENST00000368657 IL15P40933 162 aaPredicted RBP12.68□□□□□ -0.38
TUBE1-201ENST00000368657 PSMC6P62333 389 aa12.68□□□□□ -0.38
TUBE1-201ENST00000368657 BFSP2Q13515 415 aa12.68□□□□□ -0.38
TUBE1-201ENST00000368657 CCDC27Q2M243 656 aa12.68□□□□□ -0.38
TUBE1-201ENST00000368657 TBC1D9Q6ZT07 1266 aa12.68□□□□□ -0.38
TUBE1-201ENST00000368657 RIPOR3Q96MK2 946 aa12.68□□□□□ -0.38
TUBE1-201ENST00000368657 C17orf80Q9BSJ5 609 aa12.68□□□□□ -0.38
TUBE1-201ENST00000368657 DLL3Q9NYJ7 618 aa12.68□□□□□ -0.38
TUBE1-201ENST00000368657 LRP2BPQ9P2M1 347 aa12.68□□□□□ -0.38
TUBE1-201ENST00000368657 ABHD14A-ACY1A0A1B0GW23 586 aa12.67□□□□□ -0.38
TUBE1-201ENST00000368657 EFCAB14O75071 495 aa12.67□□□□□ -0.38
TUBE1-201ENST00000368657 GUCY1A2P33402 732 aa12.67□□□□□ -0.38
TUBE1-201ENST00000368657 TIMM10P62072 90 aa12.67□□□□□ -0.38
TUBE1-201ENST00000368657 DDX10Q13206 875 aaKnown RBP12.67□□□□□ -0.38
TUBE1-201ENST00000368657 MVPQ14764 893 aaKnown RBP12.67□□□□□ -0.38
TUBE1-201ENST00000368657 SEPT2Q15019 361 aa12.67□□□□□ -0.38
TUBE1-201ENST00000368657 NAA16Q6N069 864 aaPredicted RBP12.67□□□□□ -0.38
TUBE1-201ENST00000368657 TMCO2Q7Z6W1 182 aaPredicted RBP12.67□□□□□ -0.38
TUBE1-201ENST00000368657 TTC6Q86TZ1 520 aa12.67□□□□□ -0.38
TUBE1-201ENST00000368657 TLK2Q86UE8 772 aa12.67□□□□□ -0.38
TUBE1-201ENST00000368657 SPATA5Q8NB90 893 aa12.67□□□□□ -0.38
TUBE1-201ENST00000368657 HMG20BQ9P0W2 317 aa12.67□□□□□ -0.38
TUBE1-201ENST00000368657 CD207Q9UJ71 328 aa12.67□□□□□ -0.38
TUBE1-201ENST00000368657 GNEQ9Y223 722 aaKnown RBP12.67□□□□□ -0.38
TUBE1-201ENST00000368657 Q9Y3F1 56 aa12.67□□□□□ -0.38
TUBE1-201ENST00000368657 COL11A1P12107 1806 aaPredicted RBP12.67□□□□□ -0.38
TUBE1-201ENST00000368657 WDR87Q6ZQQ6 2873 aa12.67□□□□□ -0.38
TUBE1-201ENST00000368657 ASTN1O14525 1302 aa12.66□□□□□ -0.38
TUBE1-201ENST00000368657 DYNC1LI2O43237 492 aaPredicted RBP12.66□□□□□ -0.38
TUBE1-201ENST00000368657 PARNO95453 639 aaKnown RBP12.66□□□□□ -0.38
TUBE1-201ENST00000368657 MCAMP43121 646 aa12.66□□□□□ -0.38
TUBE1-201ENST00000368657 GPM6BQ13491 265 aa12.66□□□□□ -0.38
TUBE1-201ENST00000368657 CLUL1Q15846 466 aa12.66□□□□□ -0.38
TUBE1-201ENST00000368657 EPC2Q52LR7 807 aa12.66□□□□□ -0.38
TUBE1-201ENST00000368657 ARMCX2Q7L311 632 aa12.66□□□□□ -0.38
TUBE1-201ENST00000368657 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.66□□□□□ -0.38
TUBE1-201ENST00000368657 SEMA4AQ9H3S1 761 aa12.66□□□□□ -0.38
TUBE1-201ENST00000368657 VWA5AO00534 786 aa12.65□□□□□ -0.38
TUBE1-201ENST00000368657 WDR46O15213 610 aaKnown RBP12.65□□□□□ -0.38
TUBE1-201ENST00000368657 IGSF3O75054 1194 aa12.65□□□□□ -0.38
TUBE1-201ENST00000368657 EYA4O95677 639 aa12.65□□□□□ -0.38
TUBE1-201ENST00000368657 DEFB103AP81534 67 aa12.65□□□□□ -0.38
TUBE1-201ENST00000368657 CNKSR3Q6P9H4 555 aa12.65□□□□□ -0.38
TUBE1-201ENST00000368657 KIAA2013Q8IYS2 634 aa12.65□□□□□ -0.38
TUBE1-201ENST00000368657 XAGE2Q96GT9 111 aa12.65□□□□□ -0.38
TUBE1-201ENST00000368657 ZNF214Q9UL59 606 aaPredicted RBP12.65□□□□□ -0.38
TUBE1-201ENST00000368657 AKAP2Q9Y2D5 859 aa12.65□□□□□ -0.38
TUBE1-201ENST00000368657 SEC24BO95487 1268 aa12.64□□□□□ -0.39
TUBE1-201ENST00000368657 ICAM3P32942 547 aa12.64□□□□□ -0.39
TUBE1-201ENST00000368657 DLX2Q07687 328 aaPredicted RBP12.64□□□□□ -0.39
TUBE1-201ENST00000368657 KIAA1755Q5JYT7 1200 aa12.64□□□□□ -0.39
TUBE1-201ENST00000368657 IQSEC1Q6DN90 963 aa12.64□□□□□ -0.39
TUBE1-201ENST00000368657 KATNBL1Q9H079 304 aa12.64□□□□□ -0.39
TUBE1-201ENST00000368657 SH2D4AQ9H788 454 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms