RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 GDAQ9Y2T3 454 aa11.92□□□□□ -0.5
EBF3-202ENST00000368648 M0R2C6 588 aa11.92□□□□□ -0.5
EBF3-202ENST00000368648 CCNT1O60563 726 aaKnown RBP11.92□□□□□ -0.5
EBF3-202ENST00000368648 CTNND1O60716 968 aaKnown RBP11.92□□□□□ -0.5
EBF3-202ENST00000368648 PEX26Q7Z412 305 aa11.92□□□□□ -0.5
EBF3-202ENST00000368648 PYM1Q9BRP8 204 aaKnown RBP11.92□□□□□ -0.5
EBF3-202ENST00000368648 FUCA2Q9BTY2 467 aa11.92□□□□□ -0.5
EBF3-202ENST00000368648 YIPF3Q9GZM5 350 aa11.92□□□□□ -0.5
EBF3-202ENST00000368648 NOVA2Q9UNW9 492 aaKnown RBP11.92□□□□□ -0.5
EBF3-202ENST00000368648 ATP8A1Q9Y2Q0 1164 aa11.92□□□□□ -0.5
EBF3-202ENST00000368648 ZBTB12Q9Y330 459 aaPredicted RBP11.92□□□□□ -0.5
EBF3-202ENST00000368648 HYOU1Q9Y4L1 999 aa11.92□□□□□ -0.5
EBF3-202ENST00000368648 CDK12Q9NYV4 1490 aaPredicted RBP11.92□□□□□ -0.5
EBF3-202ENST00000368648 TRIM49BA6NDI0 452 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 CALCOCO2Q13137 446 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 EPHA10Q5JZY3 1008 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 KRT79Q5XKE5 535 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 CCDC26Q8TAB7 109 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 GPKOWQ92917 476 aaPredicted RBP eCLIP11.91□□□□□ -0.5
EBF3-202ENST00000368648 CHP1Q99653 195 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 HAUS7Q99871 368 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 MLXIPLQ9NP71 852 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 UTP11Q9Y3A2 253 aaKnown RBP11.91□□□□□ -0.5
EBF3-202ENST00000368648 SNAP23O00161 211 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 KRIT1O00522 736 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 RGS16O15492 202 aaPredicted RBP11.91□□□□□ -0.5
EBF3-202ENST00000368648 NCK2O43639 380 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 SASH3O75995 380 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 EEF2P13639 858 aaKnown RBP11.91□□□□□ -0.5
EBF3-202ENST00000368648 NR1D1P20393 614 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 GNAQP50148 359 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 ERFP50548 548 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 SP4Q02446 784 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 ZNF654Q8IZM8 581 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 TUBGCP2Q9BSJ2 902 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 KRT26Q7Z3Y9 468 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 RDH13Q8NBN7 331 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 KCNV2Q8TDN2 545 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 CNKSR1Q969H4 720 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 PNKPQ96T60 521 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.91□□□□□ -0.5
EBF3-202ENST00000368648 PUS7LQ9H0K6 701 aaKnown RBP11.91□□□□□ -0.5
EBF3-202ENST00000368648 HOMER2Q9NSB8 354 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 SUFUQ9UMX1 484 aa11.91□□□□□ -0.5
EBF3-202ENST00000368648 PARP1P09874 1014 aaKnown RBP11.9□□□□□ -0.5
EBF3-202ENST00000368648 H2AFXP16104 143 aaPredicted RBP11.9□□□□□ -0.5
EBF3-202ENST00000368648 SEC24CP53992 1094 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 MYO1EQ12965 1108 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 AP1M1Q9BXS5 423 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 MTRF1LQ9UGC7 380 aaKnown RBP11.9□□□□□ -0.5
EBF3-202ENST00000368648 USH1CQ9Y6N9 552 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 PTCH1Q13635 1447 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 ENO4A6NNW6 628 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 KIF28PB7ZC32 967 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 PDE8BO95263 885 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 KRT31Q15323 416 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 TAB3Q8N5C8 712 aaPredicted RBP11.9□□□□□ -0.5
EBF3-202ENST00000368648 DBNDD1Q9H9R9 158 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 FAM114A2Q9NRY5 505 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 NKIRAS1Q9NYS0 192 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 ATP6V0A2Q9Y487 856 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 VWDEQ8N2E2 1590 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 MFAP3LO75121 409 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 POLR2FP61218 127 aaKnown RBP11.9□□□□□ -0.5
EBF3-202ENST00000368648 EN1Q05925 392 aaPredicted RBP11.9□□□□□ -0.5
EBF3-202ENST00000368648 LRRC41Q15345 812 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 STOX1Q6ZVD7 989 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 PPP1R14CQ8TAE6 165 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 ENOX1Q8TC92 643 aaKnown RBP11.9□□□□□ -0.5
EBF3-202ENST00000368648 FUT8Q9BYC5 575 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 RASAL2Q9UJF2 1139 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 SPATA31A6Q5VVP1 1343 aa11.9□□□□□ -0.5
EBF3-202ENST00000368648 H0Y3Z8 333 aa11.9□□□□□ -0.51
EBF3-202ENST00000368648 TXNDC9O14530 226 aa11.9□□□□□ -0.51
EBF3-202ENST00000368648 SMIM24O75264 130 aa11.9□□□□□ -0.51
EBF3-202ENST00000368648 KRT14P02533 472 aa11.9□□□□□ -0.51
EBF3-202ENST00000368648 ATP1A1P05023 1023 aaKnown RBP11.9□□□□□ -0.51
EBF3-202ENST00000368648 ERCC5P28715 1186 aaPredicted RBP11.9□□□□□ -0.51
EBF3-202ENST00000368648 INF2Q27J81 1249 aa11.9□□□□□ -0.51
EBF3-202ENST00000368648 HERC4Q5GLZ8 1057 aaPredicted RBP11.9□□□□□ -0.51
EBF3-202ENST00000368648 SUSD4Q5VX71 490 aa11.9□□□□□ -0.51
EBF3-202ENST00000368648 USP49Q70CQ1 688 aa11.9□□□□□ -0.51
EBF3-202ENST00000368648 SV2BQ7L1I2 683 aa11.9□□□□□ -0.51
EBF3-202ENST00000368648 LMNTD2Q8IXW0 634 aa11.9□□□□□ -0.51
EBF3-202ENST00000368648 MMS19Q96T76 1030 aa11.9□□□□□ -0.51
EBF3-202ENST00000368648 EHMT1Q9H9B1 1298 aa11.9□□□□□ -0.51
EBF3-202ENST00000368648 CD248Q9HCU0 757 aa11.9□□□□□ -0.51
EBF3-202ENST00000368648 MYO3AQ8NEV4 1616 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 USP17L12C9JPN9 530 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 USP17L21D6R901 530 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 FMR1Q06787 632 aaKnown RBP eCLIP11.89□□□□□ -0.51
EBF3-202ENST00000368648 CCDC38Q502W7 563 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 RAD9BQ6WBX8 426 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 SUPT20HQ8NEM7 779 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 CCDC51Q96ER9 411 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 MLXIPQ9HAP2 919 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 USP40Q9NVE5 1235 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 DNAJC17Q9NVM6 304 aaKnown RBP11.89□□□□□ -0.51
EBF3-202ENST00000368648 STIM2Q9P246 746 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 ASIC3Q9UHC3 531 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms