RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 CD44P16070 742 aaKnown RBP19.71■□□□□ 0.75
LMNA-205ENST00000368299 SLFN13Q68D06 897 aa19.71■□□□□ 0.75
LMNA-205ENST00000368299 CABP7Q86V35 215 aa19.71■□□□□ 0.75
LMNA-205ENST00000368299 ZNF710Q8N1W2 664 aa19.71■□□□□ 0.75
LMNA-205ENST00000368299 TMEM260Q9NX78 707 aa19.71■□□□□ 0.75
LMNA-205ENST00000368299 SYNPO2Q9UMS6 1093 aa19.71■□□□□ 0.75
LMNA-205ENST00000368299 PSME4Q14997 1843 aa19.71■□□□□ 0.75
LMNA-205ENST00000368299 FAM196BA6NMK8 535 aa19.71■□□□□ 0.75
LMNA-205ENST00000368299 USP17L10C9JJH3 530 aa19.71■□□□□ 0.75
LMNA-205ENST00000368299 GMCL1P1Q8NEA9 526 aa19.71■□□□□ 0.75
LMNA-205ENST00000368299 CCDC112Q8NEF3 446 aa19.71■□□□□ 0.75
LMNA-205ENST00000368299 KBTBD4Q9NVX7 518 aa19.71■□□□□ 0.75
LMNA-205ENST00000368299 PP2D1A8MPX8 630 aa19.7■□□□□ 0.74
LMNA-205ENST00000368299 PPP1R11O60927 126 aaPredicted RBP19.7■□□□□ 0.74
LMNA-205ENST00000368299 VIL1P09327 827 aaKnown RBP19.7■□□□□ 0.74
LMNA-205ENST00000368299 SLURP2P0DP57 97 aa19.7■□□□□ 0.74
LMNA-205ENST00000368299 SLC16A2P36021 539 aa19.7■□□□□ 0.74
LMNA-205ENST00000368299 CLK2P49760 499 aaKnown RBP19.7■□□□□ 0.74
LMNA-205ENST00000368299 KCNB1Q14721 858 aa19.7■□□□□ 0.74
LMNA-205ENST00000368299 SEPT2Q15019 361 aa19.7■□□□□ 0.74
LMNA-205ENST00000368299 KLHL10Q6JEL2 608 aa19.7■□□□□ 0.74
LMNA-205ENST00000368299 CTAGE1Q96RT6 745 aa19.7■□□□□ 0.74
LMNA-205ENST00000368299 SAMSN1Q9NSI8 373 aaKnown RBP19.7■□□□□ 0.74
LMNA-205ENST00000368299 HERC5Q9UII4 1024 aaKnown RBP19.7■□□□□ 0.74
LMNA-205ENST00000368299 SPDYE2BA6NHP3 402 aa19.69■□□□□ 0.74
LMNA-205ENST00000368299 SPDYE6P0CI01 402 aa19.69■□□□□ 0.74
LMNA-205ENST00000368299 TPD52L1Q16890 204 aaPredicted RBP19.69■□□□□ 0.74
LMNA-205ENST00000368299 RBM26Q5T8P6 1007 aaKnown RBP19.69■□□□□ 0.74
LMNA-205ENST00000368299 LARGE2Q8N3Y3 721 aa19.69■□□□□ 0.74
LMNA-205ENST00000368299 IGSF22Q8N9C0 903 aa19.69■□□□□ 0.74
LMNA-205ENST00000368299 MTMR9Q96QG7 549 aa19.69■□□□□ 0.74
LMNA-205ENST00000368299 NAP1L4Q99733 375 aaKnown RBP19.69■□□□□ 0.74
LMNA-205ENST00000368299 RAB34Q9BZG1 259 aa19.69■□□□□ 0.74
LMNA-205ENST00000368299 RWDD2AQ9UIY3 292 aa19.69■□□□□ 0.74
LMNA-205ENST00000368299 CALCRLQ16602 461 aa19.69■□□□□ 0.74
LMNA-205ENST00000368299 TMEM266Q2M3C6 531 aa19.69■□□□□ 0.74
LMNA-205ENST00000368299 PPP4R3AQ6IN85 833 aa19.69■□□□□ 0.74
LMNA-205ENST00000368299 OGFOD1Q8N543 542 aa19.69■□□□□ 0.74
LMNA-205ENST00000368299 TSC1Q92574 1164 aa19.69■□□□□ 0.74
LMNA-205ENST00000368299 CSRNP1Q96S65 589 aa19.69■□□□□ 0.74
LMNA-205ENST00000368299 PSTPIP2Q9H939 334 aa19.69■□□□□ 0.74
LMNA-205ENST00000368299 RIOK3O14730 519 aaKnown RBP19.68■□□□□ 0.74
LMNA-205ENST00000368299 FXR2P51116 673 aaKnown RBP eCLIP19.68■□□□□ 0.741e-7■■□□□ 13.8
LMNA-205ENST00000368299 CDKAL1Q5VV42 579 aa19.68■□□□□ 0.74
LMNA-205ENST00000368299 POTEDQ86YR6 584 aa19.68■□□□□ 0.74
LMNA-205ENST00000368299 SIAH1Q8IUQ4 282 aa19.68■□□□□ 0.74
LMNA-205ENST00000368299 GMCL1Q96IK5 515 aa19.68■□□□□ 0.74
LMNA-205ENST00000368299 GTPBP4Q9BZE4 634 aaKnown RBP19.68■□□□□ 0.74
LMNA-205ENST00000368299 PDGFDQ9GZP0 370 aaPredicted RBP19.68■□□□□ 0.74
LMNA-205ENST00000368299 INTS13Q9NVM9 706 aa19.68■□□□□ 0.74
LMNA-205ENST00000368299 A0A1B0GTH6 734 aa19.68■□□□□ 0.74
LMNA-205ENST00000368299 TECP42680 631 aa19.68■□□□□ 0.74
LMNA-205ENST00000368299 PAK1Q13153 545 aa19.68■□□□□ 0.74
LMNA-205ENST00000368299 SMYD4Q8IYR2 804 aaPredicted RBP19.68■□□□□ 0.74
LMNA-205ENST00000368299 CALML4Q96GE6 196 aa19.68■□□□□ 0.74
LMNA-205ENST00000368299 GMLQ99445 158 aa19.68■□□□□ 0.74
LMNA-205ENST00000368299 F5H6K3 240 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 RAD21O60216 631 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 GCFC2P16383 781 aaKnown RBP19.67■□□□□ 0.74
LMNA-205ENST00000368299 DPEP1P16444 411 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 TNNI2P48788 182 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 AMPD3Q01432 767 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 KLRC3Q07444 240 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 PDIA5Q14554 519 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 DLGAP5Q15398 846 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 HSP90AA4PQ58FG1 418 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 SPECC1LQ69YQ0 1117 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 CCDC94Q9BW85 323 aaPredicted RBP19.67■□□□□ 0.74
LMNA-205ENST00000368299 TMEM232C9JQI7 657 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 PSMD14O00487 310 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 GDF11O95390 407 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 PLCG1P19174 1290 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 KCNA3P22001 575 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 STX17P56962 302 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 NR1I3Q14994 352 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 QRICH1Q2TAL8 776 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 MCTP2Q6DN12 878 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 CCDC47Q96A33 483 aaKnown RBP19.67■□□□□ 0.74
LMNA-205ENST00000368299 C16orf45Q96MC5 204 aaPredicted RBP19.67■□□□□ 0.74
LMNA-205ENST00000368299 CTNND2Q9UQB3 1225 aa19.67■□□□□ 0.74
LMNA-205ENST00000368299 SPAG1Q07617 926 aa19.66■□□□□ 0.74
LMNA-205ENST00000368299 CCAR2Q8N163 923 aaKnown RBP19.66■□□□□ 0.74
LMNA-205ENST00000368299 FAM151AQ8WW52 585 aa19.66■□□□□ 0.74
LMNA-205ENST00000368299 ZMYND15Q9H091 742 aa19.66■□□□□ 0.74
LMNA-205ENST00000368299 CTIFO43310 598 aaKnown RBP19.65■□□□□ 0.74
LMNA-205ENST00000368299 RAD17O75943 681 aa19.65■□□□□ 0.74
LMNA-205ENST00000368299 RHOBTB3O94955 611 aa19.65■□□□□ 0.74
LMNA-205ENST00000368299 TXKP42681 527 aa19.65■□□□□ 0.74
LMNA-205ENST00000368299 TBX2Q13207 712 aaPredicted RBP19.65■□□□□ 0.74
LMNA-205ENST00000368299 STIM1Q13586 685 aa19.65■□□□□ 0.74
LMNA-205ENST00000368299 CDC37Q16543 378 aaPredicted RBP19.65■□□□□ 0.74
LMNA-205ENST00000368299 FILIP1LQ4L180 1135 aa19.65■□□□□ 0.74
LMNA-205ENST00000368299 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.65■□□□□ 0.741e-6■■■■■ 53.3
LMNA-205ENST00000368299 LRWD1Q9UFC0 647 aa19.65■□□□□ 0.74
LMNA-205ENST00000368299 PCDHA1Q9Y5I3 950 aa19.65■□□□□ 0.74
LMNA-205ENST00000368299 PSDA5PKW4 1024 aaPredicted RBP19.65■□□□□ 0.74
LMNA-205ENST00000368299 GH2P01242 217 aa19.65■□□□□ 0.74
LMNA-205ENST00000368299 TNNT1P13805 278 aa19.65■□□□□ 0.74
LMNA-205ENST00000368299 UBE2SQ16763 222 aa19.65■□□□□ 0.74
LMNA-205ENST00000368299 SHROOM1Q2M3G4 852 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms