RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 CRISPLD2Q9H0B8 497 aa26.14■■□□□ 1.78
ECHDC1-203ENST00000368291 RIOX1Q9H6W3 641 aa26.14■■□□□ 1.78
ECHDC1-203ENST00000368291 CCDC69A6NI79 296 aa26.13■■□□□ 1.77
ECHDC1-203ENST00000368291 CNTN2Q02246 1040 aa26.13■■□□□ 1.77
ECHDC1-203ENST00000368291 NFXL1Q6ZNB6 911 aa26.13■■□□□ 1.77
ECHDC1-203ENST00000368291 JAKMIP1Q96N16 626 aaKnown RBP26.13■■□□□ 1.77
ECHDC1-203ENST00000368291 TINF2Q9BSI4 451 aa26.13■■□□□ 1.77
ECHDC1-203ENST00000368291 CYP39A1Q9NYL5 469 aa26.13■■□□□ 1.77
ECHDC1-203ENST00000368291 PNMA2Q9UL42 364 aa26.13■■□□□ 1.77
ECHDC1-203ENST00000368291 DHX16O60231 1041 aaKnown RBP26.12■■□□□ 1.77
ECHDC1-203ENST00000368291 HMGB1P09429 215 aaKnown RBP26.12■■□□□ 1.77
ECHDC1-203ENST00000368291 PRAMEF19Q5SWL8 479 aa26.12■■□□□ 1.77
ECHDC1-203ENST00000368291 TNRC18O15417 2968 aaPredicted RBP26.12■■□□□ 1.77
ECHDC1-203ENST00000368291 PFASO15067 1338 aa26.12■■□□□ 1.77
ECHDC1-203ENST00000368291 RXRAP19793 462 aa26.11■■□□□ 1.77
ECHDC1-203ENST00000368291 USH1GQ495M9 461 aa26.11■■□□□ 1.77
ECHDC1-203ENST00000368291 MAMDC4Q6UXC1 1216 aa26.11■■□□□ 1.77
ECHDC1-203ENST00000368291 NSMFQ6X4W1 530 aa26.11■■□□□ 1.77
ECHDC1-203ENST00000368291 ZNF467Q7Z7K2 595 aaPredicted RBP26.11■■□□□ 1.77
ECHDC1-203ENST00000368291 ASTN1O14525 1302 aa26.11■■□□□ 1.77
ECHDC1-203ENST00000368291 SOWAHBA6NEL2 793 aa26.1■■□□□ 1.77
ECHDC1-203ENST00000368291 POTEB2H3BUK9 544 aa26.1■■□□□ 1.77
ECHDC1-203ENST00000368291 PPP1R11O60927 126 aaPredicted RBP26.1■■□□□ 1.77
ECHDC1-203ENST00000368291 MLLT1Q03111 559 aaPredicted RBP26.1■■□□□ 1.77
ECHDC1-203ENST00000368291 LHX8Q68G74 356 aa26.1■■□□□ 1.77
ECHDC1-203ENST00000368291 RAB11FIP4Q86YS3 637 aa26.1■■□□□ 1.77
ECHDC1-203ENST00000368291 BRPF3Q9ULD4 1205 aa26.1■■□□□ 1.77
ECHDC1-203ENST00000368291 SLC12A7Q9Y666 1083 aa26.1■■□□□ 1.77
ECHDC1-203ENST00000368291 LRRC37A2A6NM11 1700 aa26.1■■□□□ 1.77
ECHDC1-203ENST00000368291 SNAI1O95863 264 aaPredicted RBP26.09■■□□□ 1.77
ECHDC1-203ENST00000368291 MSL3Q8N5Y2 521 aaKnown RBP26.09■■□□□ 1.77
ECHDC1-203ENST00000368291 CTCFLQ8NI51 663 aaPredicted RBP26.09■■□□□ 1.77
ECHDC1-203ENST00000368291 PURBQ96QR8 312 aaKnown RBP26.09■■□□□ 1.77
ECHDC1-203ENST00000368291 ZBTB5O15062 677 aa26.08■■□□□ 1.77
ECHDC1-203ENST00000368291 BAATQ14032 418 aaPredicted RBP26.08■■□□□ 1.77
ECHDC1-203ENST00000368291 APOA5Q6Q788 366 aa26.08■■□□□ 1.77
ECHDC1-203ENST00000368291 BLOC1S2Q6QNY1 142 aa26.08■■□□□ 1.77
ECHDC1-203ENST00000368291 UBE2Q1Q7Z7E8 422 aa26.08■■□□□ 1.77
ECHDC1-203ENST00000368291 FBXO11Q86XK2 927 aa26.08■■□□□ 1.77
ECHDC1-203ENST00000368291 PIGSQ96S52 555 aa26.08■■□□□ 1.77
ECHDC1-203ENST00000368291 SYNGAP1Q96PV0 1343 aa26.08■■□□□ 1.77
ECHDC1-203ENST00000368291 PLEKHA8P1O95397 391 aa26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 TFRCP02786 760 aaKnown RBP26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 CALM1P0DP23 149 aa26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 CALM2P0DP24 149 aa26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 CALM3P0DP25 149 aa26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 RPS6KB1P23443 525 aa26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 KIF5BP33176 963 aa26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 SLC30A10Q6XR72 485 aa26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 CCDC144CPQ8IYA2 1237 aa26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 OGDHLQ9ULD0 1010 aa26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 ABCB11O95342 1321 aa26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 SEC24BO95487 1268 aa26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 ZNF865P0CJ78 1059 aaPredicted RBP26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 CASTP20810 708 aaKnown RBP26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 CNGA1P29973 690 aa26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 MICU3Q86XE3 530 aa26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 HOMER1Q86YM7 354 aa26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 SRBD1Q8N5C6 995 aaKnown RBP26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 TBC1D5Q92609 795 aa26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 SPZ1Q9BXG8 430 aa26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 AGXT2Q9BYV1 514 aa26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 DDX20Q9UHI6 824 aaKnown RBP26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 NRBP1Q9UHY1 535 aa26.07■■□□□ 1.76
ECHDC1-203ENST00000368291 PSMA5P28066 241 aa26.06■■□□□ 1.76
ECHDC1-203ENST00000368291 SMARCA1P28370 1054 aa26.06■■□□□ 1.76
ECHDC1-203ENST00000368291 MNX1P50219 401 aaPredicted RBP26.06■■□□□ 1.76
ECHDC1-203ENST00000368291 Q6ZUG5 572 aa26.06■■□□□ 1.76
ECHDC1-203ENST00000368291 FBXL16Q8N461 479 aa26.06■■□□□ 1.76
ECHDC1-203ENST00000368291 FANCBQ8NB91 859 aa26.06■■□□□ 1.76
ECHDC1-203ENST00000368291 AMNQ9BXJ7 453 aa26.06■■□□□ 1.76
ECHDC1-203ENST00000368291 ZSWIM6Q9HCJ5 1215 aa26.06■■□□□ 1.76
ECHDC1-203ENST00000368291 PTPDC1A2A3K4 754 aa26.05■■□□□ 1.76
ECHDC1-203ENST00000368291 OPLAHO14841 1288 aa26.05■■□□□ 1.76
ECHDC1-203ENST00000368291 SEPT4O43236 478 aa26.05■■□□□ 1.76
ECHDC1-203ENST00000368291 CAPN2P17655 700 aa26.05■■□□□ 1.76
ECHDC1-203ENST00000368291 RPS6P62753 249 aaKnown RBP26.05■■□□□ 1.76
ECHDC1-203ENST00000368291 RNF207Q6ZRF8 634 aa26.05■■□□□ 1.76
ECHDC1-203ENST00000368291 ARMCX2Q7L311 632 aa26.05■■□□□ 1.76
ECHDC1-203ENST00000368291 CMTR1Q8N1G2 835 aaKnown RBP26.05■■□□□ 1.76
ECHDC1-203ENST00000368291 RGS22Q8NE09 1264 aa26.05■■□□□ 1.76
ECHDC1-203ENST00000368291 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.05■■□□□ 1.76
ECHDC1-203ENST00000368291 DDX49Q9Y6V7 483 aaKnown RBP26.05■■□□□ 1.76
ECHDC1-203ENST00000368291 PNMA6FA0A0J9YX94 578 aa26.04■■□□□ 1.76
ECHDC1-203ENST00000368291 GNAQP50148 359 aa26.04■■□□□ 1.76
ECHDC1-203ENST00000368291 RUFY3Q7L099 469 aa26.04■■□□□ 1.76
ECHDC1-203ENST00000368291 KATNBL1Q9H079 304 aa26.04■■□□□ 1.76
ECHDC1-203ENST00000368291 MRPL11Q9Y3B7 192 aaKnown RBP26.04■■□□□ 1.76
ECHDC1-203ENST00000368291 PDE4DIPQ5VU43 2346 aa26.03■■□□□ 1.76
ECHDC1-203ENST00000368291 KLF18A0A0U1RQI7 1052 aa26.03■■□□□ 1.76
ECHDC1-203ENST00000368291 MSCO60682 206 aa26.03■■□□□ 1.76
ECHDC1-203ENST00000368291 CALML3P27482 149 aa26.03■■□□□ 1.76
ECHDC1-203ENST00000368291 TMTC3Q6ZXV5 915 aa26.03■■□□□ 1.76
ECHDC1-203ENST00000368291 BRF1Q92994 677 aa26.03■■□□□ 1.76
ECHDC1-203ENST00000368291 LZTS2Q9BRK4 669 aa26.03■■□□□ 1.76
ECHDC1-203ENST00000368291 TM6SF1Q9BZW5 370 aa26.03■■□□□ 1.76
ECHDC1-203ENST00000368291 PCDHA1Q9Y5I3 950 aa26.03■■□□□ 1.76
ECHDC1-203ENST00000368291 ALPK3Q96L96 1907 aa26.03■■□□□ 1.76
ECHDC1-203ENST00000368291 ZBTB43O43298 467 aa26.02■■□□□ 1.76
ECHDC1-203ENST00000368291 FARP2O94887 1054 aaPredicted RBP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms