RNA–Protein interactions for RNA: ENST00000367718.5

TNFSF4-202, Transcript of TNF superfamily member 4, humanhuman

TSL 1 (best) BASIC

Gene TNFSF4, Length 3,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-202ENST00000367718 SYCP1Q15431 976 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 FILIP1LQ4L180 1135 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 TTC19Q6DKK2 380 aaPredicted RBP6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 TMEM139Q8IV31 216 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 RDH13Q8NBN7 331 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 CYP2W1Q8TAV3 490 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 RIN2Q8WYP3 895 aaPredicted RBP6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 HOMER2Q9NSB8 354 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 PACSIN2Q9UNF0 486 aaPredicted RBP6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 KIF1AQ12756 1690 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 FLT1P17948 1338 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 SPEF2Q9C093 1822 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 E9PMD0 336 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 RAD17O75943 681 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 KRT18P05783 430 aaKnown RBP6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 MMP10P09238 476 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 CDC25BP30305 580 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 KIF5BP33176 963 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 TXLNAP40222 546 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 COPB1P53618 953 aaKnown RBP6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 GRAPQ13588 217 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 NAALADL2Q58DX5 795 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 PRAMEF18Q5VWM3 479 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 MLKLQ8NB16 471 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 NOA1Q8NC60 698 aaKnown RBP6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 TBC1D16Q8TBP0 767 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 GRAPLQ8TC17 118 aaPredicted RBP6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 ANKRD7Q92527 254 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 ZNF512BQ96KM6 892 aaPredicted RBP6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 BRIP1Q9BX63 1249 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 TDRD3Q9H7E2 651 aaKnown RBP6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 VEZTQ9HBM0 779 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 CHORDC1Q9UHD1 332 aaPredicted RBP6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 PARP3Q9Y6F1 533 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 CTIFO43310 598 aaKnown RBP6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 NEMFO60524 1076 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 PRKAR2AP13861 404 aaKnown RBP6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 ST5P78524 1137 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 TBC1D8BQ0IIM8 1120 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 SPATA1Q5VX52 437 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 ANKRD40Q6AI12 368 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 CCDC174Q6PII3 467 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 KIAA1328Q86T90 577 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 TBC1D5Q92609 795 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 NYXQ9GZU5 481 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 DAGLAQ9Y4D2 1042 aa6.32□□□□□ -1.4
TNFSF4-202ENST00000367718 RCCD1A6NED2 376 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 STXBP3O00186 592 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 IKBKBO14920 756 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 SASH3O75995 380 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 APBA3O96018 575 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 ATP2C1P98194 919 aaPredicted RBP6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 SLC7A5Q01650 507 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 PRKG1Q13976 671 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 ECM1Q16610 540 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 TDRD12Q587J7 1177 aaKnown RBP6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 HOMEZQ8IX15 550 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 CAGE1Q8TC20 777 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 SNX29Q8TEQ0 813 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 FAM212AQ96EL1 285 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 ANKRD2Q9GZV1 360 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 MLXIPQ9HAP2 919 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 JADE2Q9NQC1 790 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 EXOC1Q9NV70 894 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 ARPP21Q9UBL0 812 aaPredicted RBP6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 PCDHA4Q9UN74 947 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 TMCO5BA8MYB1 307 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 CAVIN2O95810 425 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 CCDC175P0C221 793 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 NR1I3Q14994 352 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 SEPT2Q15019 361 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 TCERG1LQ5VWI1 586 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 PDXDC2PQ6P474 469 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 REXO1Q8N1G1 1221 aaKnown RBP6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 RRP36Q96EU6 259 aaKnown RBP6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 RTFDC1Q9BY42 306 aaPredicted RBP6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 PARD6BQ9BYG5 372 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 LACRTQ9GZZ8 138 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 DISC1Q9NRI5 854 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 ATP8A2Q9NTI2 1148 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 TCP11L1Q9NUJ3 509 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 MAGEC2Q9UBF1 373 aaPredicted RBP6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 ADD3Q9UEY8 706 aaKnown RBP6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 LRWD1Q9UFC0 647 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 POTEB3A0JP26 581 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 POTECB2RU33 542 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 ARHGAP6O43182 974 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 ZNF18P17022 549 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 CDR1P51861 262 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 PABPC4Q13310 644 aaKnown RBP eCLIP6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 AOC3Q16853 763 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 PRR16Q569H4 304 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 POTEBQ6S5H4 581 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 TMCO3Q6UWJ1 677 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 CLEC4GQ6UXB4 293 aa6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 ADAT2Q7Z6V5 191 aaKnown RBP6.31□□□□□ -1.4
TNFSF4-202ENST00000367718 C2CD5Q86YS7 1000 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms