RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 MMS22LQ6ZRQ5 1243 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 NOP9Q86U38 636 aaKnown RBP7.97□□□□□ -1.13
SYNE1-208ENST00000367256 SCYL3Q8IZE3 742 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 MYL1P05976 194 aa7.96□□□□□ -1.13
SYNE1-208ENST00000367256 TNNI3KQ59H18 835 aa7.96□□□□□ -1.13
SYNE1-208ENST00000367256 CABP7Q86V35 215 aa7.96□□□□□ -1.13
SYNE1-208ENST00000367256 SCOCQ9UIL1 159 aa7.96□□□□□ -1.13
SYNE1-208ENST00000367256 JRKLQ9Y4A0 524 aa7.96□□□□□ -1.13
SYNE1-208ENST00000367256 FPGT-TNNI3KV9GXZ4 949 aa7.96□□□□□ -1.13
SYNE1-208ENST00000367256 NVLO15381 856 aaKnown RBP7.96□□□□□ -1.13
SYNE1-208ENST00000367256 KIF1CO43896 1103 aaKnown RBP7.96□□□□□ -1.13
SYNE1-208ENST00000367256 EEF1B2P24534 225 aaKnown RBP7.96□□□□□ -1.13
SYNE1-208ENST00000367256 ANAPC5Q9UJX4 755 aa7.96□□□□□ -1.13
SYNE1-208ENST00000367256 ZNF518AQ6AHZ1 1483 aa7.96□□□□□ -1.13
SYNE1-208ENST00000367256 LMNAP02545 664 aaKnown RBP7.96□□□□□ -1.13
SYNE1-208ENST00000367256 EEF1GP26641 437 aaKnown RBP7.96□□□□□ -1.13
SYNE1-208ENST00000367256 EIF3BP55884 814 aaKnown RBP7.96□□□□□ -1.13
SYNE1-208ENST00000367256 ZBBXA8MT70 800 aa7.96□□□□□ -1.14
SYNE1-208ENST00000367256 GADD45BO75293 160 aaPredicted RBP7.96□□□□□ -1.14
SYNE1-208ENST00000367256 ITGA6P23229 1130 aa7.96□□□□□ -1.14
SYNE1-208ENST00000367256 OTUD6AQ7L8S5 288 aa7.96□□□□□ -1.14
SYNE1-208ENST00000367256 KLHDC4Q8TBB5 520 aa7.96□□□□□ -1.14
SYNE1-208ENST00000367256 UHRF1BP1LA0JNW5 1464 aa7.96□□□□□ -1.14
SYNE1-208ENST00000367256 MAP3K7O43318 606 aa7.96□□□□□ -1.14
SYNE1-208ENST00000367256 SYF2O95926 243 aaKnown RBP7.96□□□□□ -1.14
SYNE1-208ENST00000367256 STX1BP61266 288 aa7.96□□□□□ -1.14
SYNE1-208ENST00000367256 MYSM1Q5VVJ2 828 aa7.96□□□□□ -1.14
SYNE1-208ENST00000367256 TESK2Q96S53 571 aa7.96□□□□□ -1.14
SYNE1-208ENST00000367256 IFT122Q9HBG6 1241 aa7.96□□□□□ -1.14
SYNE1-208ENST00000367256 TFCP2L1Q9NZI6 479 aa7.96□□□□□ -1.14
SYNE1-208ENST00000367256 TTI1O43156 1089 aa7.96□□□□□ -1.14
SYNE1-208ENST00000367256 KRT40Q6A162 431 aa7.96□□□□□ -1.14
SYNE1-208ENST00000367256 METTL14Q9HCE5 456 aaKnown RBP7.96□□□□□ -1.14
SYNE1-208ENST00000367256 MYO18AQ92614 2054 aaKnown RBP7.96□□□□□ -1.14
SYNE1-208ENST00000367256 SPDYE2BA6NHP3 402 aa7.96□□□□□ -1.14
SYNE1-208ENST00000367256 INHBAP08476 426 aa7.96□□□□□ -1.14
SYNE1-208ENST00000367256 SPDYE6P0CI01 402 aa7.96□□□□□ -1.14
SYNE1-208ENST00000367256 SPATA1Q5VX52 437 aa7.96□□□□□ -1.14
SYNE1-208ENST00000367256 ADAT2Q7Z6V5 191 aaKnown RBP7.96□□□□□ -1.14
SYNE1-208ENST00000367256 EFHD1Q9BUP0 239 aa7.96□□□□□ -1.14
SYNE1-208ENST00000367256 FGFR1OP2Q9NVK5 253 aa7.96□□□□□ -1.14
SYNE1-208ENST00000367256 TNNC2P02585 160 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 TTBK2Q6IQ55 1244 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 NLRC4Q9NPP4 1024 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 TYW5A2RUC4 315 aaKnown RBP7.95□□□□□ -1.14
SYNE1-208ENST00000367256 GTPBP6O43824 516 aaPredicted RBP7.95□□□□□ -1.14
SYNE1-208ENST00000367256 MAN1A2O60476 641 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 ZBED4O75132 1171 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 MAGEA9P43362 315 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 IDI1Q13907 227 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 EIF4A2Q14240 407 aaKnown RBP7.95□□□□□ -1.14
SYNE1-208ENST00000367256 ZYXQ15942 572 aaKnown RBP7.95□□□□□ -1.14
SYNE1-208ENST00000367256 HADHQ16836 314 aaKnown RBP7.95□□□□□ -1.14
SYNE1-208ENST00000367256 NOSTRINQ8IVI9 506 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 NFATC2IPQ8NCF5 419 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 SLC17A8Q8NDX2 589 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 C8orf37Q96NL8 207 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 SPC25Q9HBM1 224 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.95□□□□□ -1.14
SYNE1-208ENST00000367256 ANGPTL2Q9UKU9 493 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 WDR62O43379 1518 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 TRPA1O75762 1119 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 PCP11498 1178 aaKnown RBP7.95□□□□□ -1.14
SYNE1-208ENST00000367256 NSFP46459 744 aaKnown RBP7.95□□□□□ -1.14
SYNE1-208ENST00000367256 CNPY4Q8N129 248 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 DEPTORQ8TB45 409 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 DPH5Q9H2P9 285 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 ANGPTL3Q9Y5C1 460 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 ATP5HO75947 161 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 IFT88Q13099 833 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 C16orf87Q6PH81 154 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 FAM81BQ96LP2 452 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 MMS19Q96T76 1030 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 TNRQ92752 1358 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 EYA2O00167 538 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 SCYL2Q6P3W7 929 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 EMBQ6PCB8 327 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 KRT82Q9NSB4 513 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 KCNJ14Q9UNX9 436 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 SYNJ2BP-COX16A0A087WUM0 186 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 RAPH1Q70E73 1250 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 XAGE2Q96GT9 111 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 CEP19Q96LK0 163 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 KIF9Q9HAQ2 790 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 COX16Q9P0S2 106 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 GGA1Q9UJY5 639 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 SGK1O00141 431 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 NR1I2O75469 434 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 GJA3Q9Y6H8 435 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 LAD1O00515 517 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 CCT5P48643 541 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 LIG4P49917 911 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 RAP1GDS1P52306 607 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 BFSP1Q12934 665 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 DDB1Q16531 1140 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 TAB3Q8N5C8 712 aaPredicted RBP7.95□□□□□ -1.14
SYNE1-208ENST00000367256 TRIM11Q96F44 468 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 PPP1R13BQ96KQ4 1090 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 TRIM15Q9C019 465 aa7.95□□□□□ -1.14
SYNE1-208ENST00000367256 CCPG1Q9ULG6 757 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms