RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 ARHGAP6O43182 974 aa25.49■■□□□ 1.67
LDB1-201ENST00000361198 RPN1P04843 607 aaKnown RBP25.49■■□□□ 1.67
LDB1-201ENST00000361198 NR1I3Q14994 352 aa25.49■■□□□ 1.67
LDB1-201ENST00000361198 TTBK2Q6IQ55 1244 aa25.49■■□□□ 1.67
LDB1-201ENST00000361198 ADGRF4Q8IZF3 695 aa25.49■■□□□ 1.67
LDB1-201ENST00000361198 PLIN2Q99541 437 aa25.49■■□□□ 1.67
LDB1-201ENST00000361198 FAM198AQ9UFP1 575 aa25.49■■□□□ 1.67
LDB1-201ENST00000361198 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.49■■□□□ 1.673e-9■□□□□ 11.3
LDB1-201ENST00000361198 C10orf71Q711Q0 1435 aa25.49■■□□□ 1.67
LDB1-201ENST00000361198 AOC3Q16853 763 aa25.48■■□□□ 1.67
LDB1-201ENST00000361198 FAM53CQ9NYF3 392 aa25.48■■□□□ 1.67
LDB1-201ENST00000361198 CTNND2Q9UQB3 1225 aa25.48■■□□□ 1.67
LDB1-201ENST00000361198 A0A1B0GTH6 734 aa25.48■■□□□ 1.67
LDB1-201ENST00000361198 SLC15A2Q16348 729 aa25.48■■□□□ 1.67
LDB1-201ENST00000361198 CDKAL1Q5VV42 579 aa25.48■■□□□ 1.67
LDB1-201ENST00000361198 LRRC15Q8TF66 581 aa25.48■■□□□ 1.67
LDB1-201ENST00000361198 C7orf43Q8WVR3 580 aa25.48■■□□□ 1.67
LDB1-201ENST00000361198 ZNF646O15015 1829 aaPredicted RBP25.48■■□□□ 1.67
LDB1-201ENST00000361198 SIPA1L1O43166 1804 aa25.48■■□□□ 1.67
LDB1-201ENST00000361198 COBLO75128 1261 aa25.47■■□□□ 1.67
LDB1-201ENST00000361198 HDLBPQ00341 1268 aaKnown RBP25.47■■□□□ 1.67
LDB1-201ENST00000361198 SPECC1LQ69YQ0 1117 aa25.47■■□□□ 1.67
LDB1-201ENST00000361198 CNKSR1Q969H4 720 aa25.47■■□□□ 1.67
LDB1-201ENST00000361198 IDI2Q9BXS1 227 aa25.47■■□□□ 1.67
LDB1-201ENST00000361198 SHROOM1Q2M3G4 852 aaPredicted RBP25.47■■□□□ 1.67
LDB1-201ENST00000361198 ZNF658Q5TYW1 1059 aaPredicted RBP25.47■■□□□ 1.67
LDB1-201ENST00000361198 SH3BP5LQ7L8J4 393 aa25.47■■□□□ 1.67
LDB1-201ENST00000361198 CCDC17Q96LX7 622 aa25.47■■□□□ 1.67
LDB1-201ENST00000361198 DHX36Q9H2U1 1008 aaKnown RBP25.47■■□□□ 1.67
LDB1-201ENST00000361198 PNMA6FA0A0J9YX94 578 aa25.46■■□□□ 1.67
LDB1-201ENST00000361198 ZSCAN12O43309 604 aa25.46■■□□□ 1.67
LDB1-201ENST00000361198 SLC16A2P36021 539 aa25.46■■□□□ 1.67
LDB1-201ENST00000361198 ADCY7P51828 1080 aa25.46■■□□□ 1.67
LDB1-201ENST00000361198 KCTD1Q719H9 257 aa25.46■■□□□ 1.67
LDB1-201ENST00000361198 AK8Q96MA6 479 aa25.46■■□□□ 1.67
LDB1-201ENST00000361198 RMND1Q9NWS8 449 aa25.46■■□□□ 1.67
LDB1-201ENST00000361198 DNAI1Q9UI46 699 aa25.46■■□□□ 1.67
LDB1-201ENST00000361198 PPP1R11O60927 126 aaPredicted RBP25.46■■□□□ 1.67
LDB1-201ENST00000361198 H2AFXP16104 143 aaPredicted RBP25.46■■□□□ 1.67
LDB1-201ENST00000361198 EZH2Q15910 746 aaKnown RBP25.46■■□□□ 1.67
LDB1-201ENST00000361198 GDAQ9Y2T3 454 aa25.46■■□□□ 1.67
LDB1-201ENST00000361198 STX10O60499 249 aa25.45■■□□□ 1.66
LDB1-201ENST00000361198 CCDC96Q2M329 555 aa25.45■■□□□ 1.66
LDB1-201ENST00000361198 GPATCH4Q5T3I0 446 aaKnown RBP25.45■■□□□ 1.66
LDB1-201ENST00000361198 POTEDQ86YR6 584 aa25.45■■□□□ 1.66
LDB1-201ENST00000361198 KBTBD4Q9NVX7 518 aa25.45■■□□□ 1.66
LDB1-201ENST00000361198 PI4KBQ9UBF8 816 aa25.45■■□□□ 1.66
LDB1-201ENST00000361198 TEX33O43247 280 aa25.44■■□□□ 1.66
LDB1-201ENST00000361198 TECP42680 631 aa25.44■■□□□ 1.66
LDB1-201ENST00000361198 ERCC6LQ2NKX8 1250 aa25.44■■□□□ 1.66
LDB1-201ENST00000361198 CABP7Q86V35 215 aa25.44■■□□□ 1.66
LDB1-201ENST00000361198 ZSCAN29Q8IWY8 852 aaPredicted RBP25.44■■□□□ 1.66
LDB1-201ENST00000361198 TC2NQ8N9U0 490 aa25.44■■□□□ 1.66
LDB1-201ENST00000361198 SERPINA10Q9UK55 444 aa25.44■■□□□ 1.66
LDB1-201ENST00000361198 RGPD3A6NKT7 1758 aaPredicted RBP25.44■■□□□ 1.66
LDB1-201ENST00000361198 RGPD4Q7Z3J3 1758 aa25.44■■□□□ 1.66
LDB1-201ENST00000361198 FANCGO15287 622 aa25.44■■□□□ 1.66
LDB1-201ENST00000361198 EDIL3O43854 480 aa25.44■■□□□ 1.66
LDB1-201ENST00000361198 BAG1Q99933 345 aaPredicted RBP25.44■■□□□ 1.66
LDB1-201ENST00000361198 SRRTQ9BXP5 876 aaKnown RBP25.44■■□□□ 1.66
LDB1-201ENST00000361198 RWDD2AQ9UIY3 292 aa25.44■■□□□ 1.66
LDB1-201ENST00000361198 MAPK8IP1Q9UQF2 711 aa25.44■■□□□ 1.66
LDB1-201ENST00000361198 PLCG1P19174 1290 aa25.43■■□□□ 1.66
LDB1-201ENST00000361198 EN1Q05925 392 aaPredicted RBP25.43■■□□□ 1.66
LDB1-201ENST00000361198 PAK1Q13153 545 aa25.43■■□□□ 1.66
LDB1-201ENST00000361198 CERKLQ49MI3 558 aaPredicted RBP25.43■■□□□ 1.66
LDB1-201ENST00000361198 LRRN4CLQ8ND94 238 aa25.43■■□□□ 1.66
LDB1-201ENST00000361198 ADD3Q9UEY8 706 aaKnown RBP25.43■■□□□ 1.66
LDB1-201ENST00000361198 PPP2R2CQ9Y2T4 447 aa25.43■■□□□ 1.66
LDB1-201ENST00000361198 USP17L10C9JJH3 530 aa25.43■■□□□ 1.66
LDB1-201ENST00000361198 PRCPP42785 496 aa25.43■■□□□ 1.66
LDB1-201ENST00000361198 GOLGA6L9A6NEM1 432 aa25.42■■□□□ 1.66
LDB1-201ENST00000361198 EEF2P13639 858 aaKnown RBP25.42■■□□□ 1.66
LDB1-201ENST00000361198 ADKP55263 362 aaKnown RBP25.42■■□□□ 1.66
LDB1-201ENST00000361198 ORC2Q13416 577 aaPredicted RBP25.42■■□□□ 1.66
LDB1-201ENST00000361198 KLRC4O43908 158 aa25.42■■□□□ 1.66
LDB1-201ENST00000361198 GABPB1Q06547 395 aaPredicted RBP25.42■■□□□ 1.66
LDB1-201ENST00000361198 NELFBQ8WX92 580 aa25.42■■□□□ 1.66
LDB1-201ENST00000361198 RIC8AQ9NPQ8 531 aa25.42■■□□□ 1.66
LDB1-201ENST00000361198 ZBTB5O15062 677 aa25.41■■□□□ 1.66
LDB1-201ENST00000361198 TDP2O95551 362 aa25.41■■□□□ 1.66
LDB1-201ENST00000361198 MYL1P05976 194 aa25.41■■□□□ 1.66
LDB1-201ENST00000361198 TXKP42681 527 aa25.41■■□□□ 1.66
LDB1-201ENST00000361198 PPP1R18Q6NYC8 613 aa25.41■■□□□ 1.66
LDB1-201ENST00000361198 KRT222Q8N1A0 295 aa25.41■■□□□ 1.66
LDB1-201ENST00000361198 IGSF22Q8N9C0 903 aa25.41■■□□□ 1.66
LDB1-201ENST00000361198 MTMR8Q96EF0 704 aa25.41■■□□□ 1.66
LDB1-201ENST00000361198 MTMR9Q96QG7 549 aa25.41■■□□□ 1.66
LDB1-201ENST00000361198 CTAGE1Q96RT6 745 aa25.41■■□□□ 1.66
LDB1-201ENST00000361198 TDRD3Q9H7E2 651 aaKnown RBP25.41■■□□□ 1.66
LDB1-201ENST00000361198 SLC37A4O43826 429 aa25.4■■□□□ 1.66
LDB1-201ENST00000361198 RAD21O60216 631 aa25.4■■□□□ 1.66
LDB1-201ENST00000361198 KCNB1Q14721 858 aa25.4■■□□□ 1.66
LDB1-201ENST00000361198 UBE2SQ16763 222 aa25.4■■□□□ 1.66
LDB1-201ENST00000361198 MKL1Q969V6 931 aa25.4■■□□□ 1.66
LDB1-201ENST00000361198 CAMKK2Q96RR4 588 aa25.4■■□□□ 1.66
LDB1-201ENST00000361198 MMTAG2Q9BU76 263 aaKnown RBP25.4■■□□□ 1.66
LDB1-201ENST00000361198 YDJCA8MPS7 323 aa25.4■■□□□ 1.66
LDB1-201ENST00000361198 NPM3O75607 178 aaKnown RBP25.4■■□□□ 1.66
LDB1-201ENST00000361198 TATDN1Q6P1N9 297 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms